>CHR730 (CHR730Q) /CSM/CH/CHR7-B/CHR730Q.Seq.d/
TTTAAAGAATTCTTATAAATCTGAATCATATCATGATTTATCAAAACAACAAGATCAATT
AGTTTCAAAATTAGATGAACATTTTGAATATCAATTAAATTCAAAACAAATTGATTTAGA
ACCATATGAAATTGAAGTAAAAGTTAAAGCAACTGGTATAAATTATAAAGATTATTTGAA
ATATAATGAAATGATAAAAGTAAATGAAGCTGGTATTGGTTTTGATTTTTCTGGTGTAGT
AAGTCGTGTTGGAATTAAATCATCTAAAGAATTTAAAGTTGGTGATCAAGTTTATGGTAT
TGCATATGAAACATCATCATCTCATATTATTATTGATTCATTATTAGCATGTCATAAACC
ATCAAAGATTACACATGTTCAAGCAGCTTCAATTCCAGCAGTTTATTCAACATCACTTTA
TTGTTTATATGATGTTGGTAATTTAAGAGATGAAGAATCAGTATTAATTCATTCAGGATC
TGGTGGTGTTGGATTATCAGGATTGGAAATATTAAAATCAAATAATCATTCATCACCAAT
GTTTGTTACAGTTGGATCAGAAGAAAAGAAACAATATCTAATTAATACCTATGGTGATTT
AATTACTGGAATTTATTXXXXXXXXXX

LKNSYKSESYHDLSKQQDQLVSKLDEHFEYQLNSKQIDLEPYEIEVKVKATGINYKDYLK
YNEMIKVNEAGIGFDFSGVVSRVGIKSSKEFKVGDQVYGIAYETSSSHIIIDSLLACHKP
SKITHVQAASIPAVYSTSLYCLYDVGNLRDEESVLIHSGSGGVGLSGLEILKSNNHSSPM
FVTVGSEEKKQYLINTYGDLITGIY---

Frame A:
fkefl*i*iis*fikttrsisfkir*tf*isikfktn*frti*n*sks*snwykl*rlfe
i**ndksk*swywf*ffwcskscwn*ii*ri*sw*sslwyci*niiisyyy*fiisms*t
ikdytcsssfnssslfnitllfi*cw*fkr*risinsfriwwcwiirignikik*sfitn
vcyswirrketisn*ylw*fnywnl---


Frame B:
LKNSYKSESYHDLSKQQDQLVSKLDEHFEYQLNSKQIDLEPYEIEVKVKATGINYKDYLK
YNEMIKVNEAGIGFDFSGVVSRVGIKSSKEFKVGDQVYGIAYETSSSHIIIDSLLACHKP
SKITHVQAASIPAVYSTSLYCLYDVGNLRDEESVLIHSGSGGVGLSGLEILKSNNHSSPM
FVTVGSEEKKQYLINTYGDLITGIY---


Frame C:
*rilinlnhimiyqnnkin*fqn*mnilnin*iqnkli*nhmklk*klkqlv*iikii*n
imk**k*mklvlvliflv**vvlelnhlknlklvikfmvlhmkhhhlilllihy*hvinh
qrlhmfkqlqfqqfiqhhfivymmlvi*emknqy*fiqdlvvldyqdwky*nqiiihhqc
llqldqkkrnni*lipmvi*llef---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHR730 (CHR730Q) /CSM/CH/CHR7-B/CHR730Q.Seq.d/                       1223   0.0
SHF391 (SHF391Q) /CSM/SH/SHF3-D/SHF391Q.Seq.d/                         56   7e-07
SHC650 (SHC650Q) /CSM/SH/SHC6-C/SHC650Q.Seq.d/                         46   6e-04
VHL606 (VHL606Q) /CSM/VH/VHL6-A/VHL606Q.Seq.d/                         42   0.010
CHG376 (CHG376Q) /CSM/CH/CHG3-D/CHG376Q.Seq.d/                         40   0.040
AFJ849 (AFJ849Q) /CSM/AF/AFJ8-C/AFJ849Q.Seq.d/                         40   0.040
VFH272 (VFH272Q) /CSM/VF/VFH2-C/VFH272Q.Seq.d/                         38   0.16
SLH620 (SLH620Q) /CSM/SL/SLH6-A/SLH620Q.Seq.d/                         38   0.16
SHH235 (SHH235Q) /CSM/SH/SHH2-B/SHH235Q.Seq.d/                         38   0.16
SFJ403 (SFJ403Q) /CSM/SF/SFJ4-A/SFJ403Q.Seq.d/                         38   0.16

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC117176|AC117176.2 Dictyostelium discoideum chromosome 2 map 5018074-5200947 strain AX4, complete sequence.    56   1e-17  9
AC117075|AC117075.2 Dictyostelium discoideum chromosome 2 map 5201047-5455781 strain AX4, complete sequence.    56   2e-10  8
AC116982|AC116982.2 Dictyostelium discoideum chromosome 2 map 3622643-3879522 strain AX4, complete sequence.    56   2e-08  2
AC154686|AC154686.2 Mus musculus BAC clone RP24-327C20 from chromosome 14, complete sequence.    44   0.007  7
AC116979|AC116979.3 Dictyostelium discoideum chromosome 2 map 6445720-6776760 strain AX4, complete sequence.    38   0.023  11
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence.    32   0.023  13
AC116977|AC116977.2 Dictyostelium discoideum chromosome 2 map 5515173-5817331 strain AX4, complete sequence.    32   0.033  11
AE014825|AE014825.1 Plasmodium falciparum 3D7 chromosome 14 section 10 of 13 of the complete sequence.    36   0.041  8
AC140915|AC140915.6 Medicago truncatula clone mth2-10l24, complete sequence.    46   0.044  4
AL035476|AL035476.7 Plasmodium falciparum MAL4P3.                  38   0.11   10

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC117075_22(AC117075|pid:none) Dictyostelium discoideum chromoso...   161   2e-38
AC117176_58(AC117176|pid:none) Dictyostelium discoideum chromoso...   154   2e-36
AC116982_20(AC116982|pid:none) Dictyostelium discoideum chromoso...   151   2e-35
AC116982_23(AC116982|pid:none) Dictyostelium discoideum chromoso...   147   2e-34
AC116963_16(AC116963|pid:none) Dictyostelium discoideum chromoso...   122   6e-27
AC116963_19(AC116963|pid:none) Dictyostelium discoideum chromoso...   122   1e-26
AC116305_75(AC116305|pid:none) Dictyostelium discoideum chromoso...    89   1e-16
AC116305_81(AC116305|pid:none) Dictyostelium discoideum chromoso...    86   8e-16
AC116982_72(AC116982|pid:none) Dictyostelium discoideum chromoso...    85   1e-15
AF155773_7(AF155773|pid:none) Gibberella moniliformis fumonisin ...    80   3e-14

 psg: 0.53  gvh: 0.15  alm: 0.44  top: 0.53  tms: 0.00  mit: 0.24  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 60.0 %: nuclear
	 20.0 %: cytoplasmic
	  8.0 %: cytoskeletal
	  4.0 %: mitochondrial
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system

>> prediction for CHR730 is nuc

>CHR730F.Seq
TTTAAAGAATTCTTATAAATCTGAATCATATCATGATTTATCAAAACAACAAGATCAATT
AGTTTCAAAATTAGATGAACATTTTGAATATCAATTAAATTCAAAACAAATTGATTTAGA
ACCATATGAAATTGAAGTAAAAGTTAAAGCAACTGGTATAAATTATAAAGATTATTTGAA
ATATAATGAAATGATAAAAGTAAATGAAGCTGGTATTGGTTTTGATTTTTCTGGTGTAGT
AAGTCGTGTTGGAATTAAATCATCTAAAGAATTTAAAGTTGGTGATCAAGTTTATGGTAT
TGCATATGAAACATCATCATCTCATATTATTATTGATTCATTATTAGCATGTCATAAACC
ATCAAAGATTACACATGTTCAAGCAGCTTCAATTCCAGCAGTTTATTCAACATCACTTTA
TTGTTTATATGATGTTGGTAATTTAAGAGATGAAGAATCAGTATTAATTCATTCAGGATC
TGGTGGTGTTGGATTATCAGGATTGGAAATATTAAAATCAAATAATCATTCATCACCAAT
GTTTGTTACAGTTGGATCAGAAGAAAAGAAACAATATCTAATTAATACCTATGGTGATTT
AATTACTGGAATTTATTNNNNNNNNNN