>CHR545 (CHR545Q) /CSM/CH/CHR5-B/CHR545Q.Seq.d/
XXXXXXXXXXCTGGTAAATGTGTAGCTCAAGATTCTCATTGTGATGATGGTAATCCATGT
ACTGATAATGCTTGTGTCGCTTCAGCTAATAGTACCGCCAATAGCCAAGTTGGTCAATGC
ACTCAAACTCCAACTGCTAAATGTGATTTGGGTGATAAATGTATGGTTTACAGTTGTACC
TTGGAAGGTGGTTGTAATGCAACTCAACGTGTTTGTCCAAACTCTGGTGCTTGTAAAATT
GGTTATTGTGAACCTGGTTTCGGTTGTAAATTAAAGGATAGAGTTTGTTCTTCCGATTGG
TATTGTATTGAAGCTCAATGTGATGCAAAATATGGTTGCATTCAATTCGATAGAAGATGT
GCTCCTGATAATAGTAAATGTCAAGAAGGTGTCTGTGTAAACAATACTGCTATCGGTAAA
AATGATGGAAAATGTATTTCTGAAGATTATGATCCAAAACCATTTGTTTGTCAAAAAGCT
GCTTTAGTTTCAACTGCTGTTATTGCAAGTGTTGTTGTAGTTGGTGCTGTTGTTTTAGGT
GCTGCTATATTTGCGGGTAAGAANNGNTATGATG

---GKCVAQDSHCDDGNPCTDNACVASANSTANSQVGQCTQTPTAKCDLGDKCMVYSCTL
EGGCNATQRVCPNSGACKIGYCEPGFGCKLKDRVCSSDWYCIEAQCDAKYGCIQFDRRCA
PDNSKCQEGVCVNNTAIGKNDGKCISEDYDPKPFVCQKAALVSTAVIASVVVVGAVVLGA
AIFAGKXXYD

Frame A:
---w*mcssrfsl**w*smy**clcrfs**yrq*pswsmhsnsnc*m*fg**myglqlyl
grwl*cnstclsklwcl*nwll*twfrl*ikg*slffrlvly*ssm*ckiwlhsir*kmc
s****msrrclckqycyr*k*wkmyf*rl*skticlskscfsfnccyckcccswcccfrc
cyicg*exx*


Frame B:
---GKCVAQDSHCDDGNPCTDNACVASANSTANSQVGQCTQTPTAKCDLGDKCMVYSCTL
EGGCNATQRVCPNSGACKIGYCEPGFGCKLKDRVCSSDWYCIEAQCDAKYGCIQFDRRCA
PDNSKCQEGVCVNNTAIGKNDGKCISEDYDPKPFVCQKAALVSTAVIASVVVVGAVVLGA
AIFAGKXXYD


Frame C:
---vnv*lkilivmmvihvlimlvslqlivppiaklvnalklqllnviwvinvwftvvpw
kvvvmqlnvfvqtlvlvklvivnlvsvvn*riefvlpigivlklnvmqnmvafnsiedvl
liivnvkkvsv*tillsvkmmenvflkimiqnhlfvkkll*fqllllqvll*lvllf*vl
lylrvrxxmm

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSD152 (SSD152Q) /CSM/SS/SSD1-C/SSD152Q.Seq.d/                       1100   0.0
SHK734 (SHK734Q) /CSM/SH/SHK7-B/SHK734Q.Seq.d/                       1100   0.0
SHG811 (SHG811Q) /CSM/SH/SHG8-A/SHG811Q.Seq.d/                       1100   0.0
SHG135 (SHG135Q) /CSM/SH/SHG1-B/SHG135Q.Seq.d/                       1100   0.0
SHE102 (SHE102Q) /CSM/SH/SHE1-A/SHE102Q.Seq.d/                       1100   0.0
SHD679 (SHD679Q) /CSM/SH/SHD6-D/SHD679Q.Seq.d/                       1100   0.0
SHC446 (SHC446Q) /CSM/SH/SHC4-B/SHC446Q.Seq.d/                       1100   0.0
SHB718 (SHB718Q) /CSM/SH/SHB7-A/SHB718Q.Seq.d/                       1100   0.0
SHA738 (SHA738Q) /CSM/SH/SHA7-B/SHA738Q.Seq.d/                       1100   0.0
SFE864 (SFE864Q) /CSM/SF/SFE8-C/SFE864Q.Seq.d/                       1100   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence.    66   9e-07  1
AC115684|AC115684.2 Dictyostelium discoideum chromosome 2 map 3108975-3191114 strain AX4, complete sequence.    42   0.001  4
CX053834|CX053834.1 UCRCS09_8E08_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-8E08-I15-1-5.g, mRNA sequence.    50   0.051  1
CC946427|CC946427.1 BOIFV20TF BO_1.4_1.6_KB_nuc Brassica oleracea genomic clone BOIFV20, genomic survey sequence.    50   0.051  1
CC075688|CC075688.1 CSU-K33r.25G4.SP6 CSU-K33r Aedes aegypti genomic clone CSU-K33r.25G4, DNA sequence.    50   0.051  1
BH960705|BH960705.1 odd88f07.b1 B.oleracea002 Brassica oleracea genomic, DNA sequence.    50   0.051  1
AR549621|AR549621.1 Sequence 4752 from patent US 6747137.          46   0.18   2
AL287678|AL287678.1 Tetraodon nigroviridis genome survey sequence T7 end of clone 105D19 of library G from Tetraodon nigroviridis.    38   0.53   2
AI357542|AI357542.1 qu20b04.x1 NCI_CGAP_Ov23 Homo sapiens cDNA clone IMAGE:1965295 3', mRNA sequence.    36   0.77   2
CQ467258|CQ467258.1 Sequence 10036 from Patent WO0192581.          36   0.77   2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54P69) RecName: Full=Protein psiM; Flags: Precursor;                350   1e-95
(Q86HT1) RecName: Full=Protein psiL; Flags: Precursor;  &AC11695...   155   7e-37
(Q557E9) RecName: Full=Protein psiG; Flags: Precursor;  &AC11568...   152   6e-36
(Q94494) RecName: Full=Protein psiH; Flags: Precursor;  &U67940_...   142   6e-33
(Q54VS2) RecName: Full=Protein psiP; Flags: Precursor;                132   6e-30
(Q54G85) RecName: Full=Protein psiJ; Flags: Precursor;                113   4e-24
(Q54CH8) RecName: Full=Protein psiN; Flags: Precursor;                 97   2e-19
S44208(S44208) extracellular matrix protein B - Dictyostelium mi...    73   6e-12
AC117072_61(AC117072|pid:none) Dictyostelium discoideum chromoso...    68   1e-10
AC116984_103(AC116984|pid:none) Dictyostelium discoideum chromos...    67   4e-10

 psg: 0.75  gvh: 0.50  alm: 0.16  top: 0.60  tms: 0.07  mit: 0.23  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 1.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 24.0 %: cytoplasmic
	 20.0 %: vesicles of secretory system
	 16.0 %: nuclear
	  8.0 %: mitochondrial
	  8.0 %: Golgi
	  8.0 %: endoplasmic reticulum
	  4.0 %: extracellular, including cell wall
	  4.0 %: cytoskeletal
	  4.0 %: vacuolar
	  4.0 %: plasma membrane

>> prediction for CHR545 is cyt

>CHR545Z.Seq
NNNNNNNNNNCTGGTAAATGTGTAGCTCAAGATTCTCATTGTGATGATGGTAATCCATGT
ACTGATAATGCTTGTGTCGCTTCAGCTAATAGTACCGCCAATAGCCAAGTTGGTCAATGC
ACTCAAACTCCAACTGCTAAATGTGATTTGGGTGATAAATGTATGGTTTACAGTTGTACC
TTGGAAGGTGGTTGTAATGCAACTCAACGTGTTTGTCCAAACTCTGGTGCTTGTAAAATT
GGTTATTGTGAACCTGGTTTCGGTTGTAAATTAAAGGATAGAGTTTGTTCTTCCGATTGG
TATTGTATTGAAGCTCAATGTGATGCAAAATATGGTTGCATTCAATTCGATAGAAGATGT
GCTCCTGATAATAGTAAATGTCAAGAAGGTGTCTGTGTAAACAATACTGCTATCGGTAAA
AATGATGGAAAATGTATTTCTGAAGATTATGATCCAAAACCATTTGTTTGTCAAAAAGCT
GCTTTAGTTTCAACTGCTGTTATTGCAAGTGTTGTTGTAGTTGGTGCTGTTGTTTTAGGT
GCTGCTATATTTGCGGGTAAGAANNGNTATGATG