>CHR451 (CHR451Q) /CSM/CH/CHR4-C/CHR451Q.Seq.d/
XXXXXXXXXXTACTGAAGCATCTGGTACAAGTAATATGAAATTCAGTATGAATGGTGGTC
TTATCATTGGTACTTTGGATGGTGCAAACATTGAAATTCGTGATGCCATTGGTCATGAAA
ATATGTACATCTTTGGTGCTCGTTCTGAAGAGGTCAACAAAGTAAAGAAAATTATTCATG
ATGGAAAATTCACACCAGACACTAGATGGGCTCGTGTTTTAACCGCTATTAAAGAAGATA
CTTTTGGTCCACATGAACAATTCCAAGATATTATCAACTCTGTTAGTGGTGGCAATGATC
ATTACATTCTTAGTTATGATTTTGGTTCTTACTTGGATATTCAAAATTCAATTGATCAAG
ATTTCAAAGATAGAGCTAAATGGGCTAAAAAATCAATTATGGCTTCAGTTTGTTGTGGTA
AATTCAGTTCAGATAGAACCATTAAAGAGTATGCTCAACAAATTTGGGGTATTGAAGAAT
GGAAGAGACCAGGTCCAGTTCCAGTTTCAAATGAAGAAGCTCGTTCTTTATTAGTTCCAC
CACCATCTGGTTCACCAAATGATATCAATGCTATCTCAATTGAAAGATTATCACCTTTAA
CT

---TEASGTSNMKFSMNGGLIIGTLDGANIEIRDAIGHENMYIFGARSEEVNKVKKIIHD
GKFTPDTRWARVLTAIKEDTFGPHEQFQDIINSVSGGNDHYILSYDFGSYLDIQNSIDQD
FKDRAKWAKKSIMASVCCGKFSSDRTIKEYAQQIWGIEEWKRPGPVPVSNEEARSLLVPP
PSGSPNDINAISIERLSPLT

Frame A:
---TEASGTSNMKFSMNGGLIIGTLDGANIEIRDAIGHENMYIFGARSEEVNKVKKIIHD
GKFTPDTRWARVLTAIKEDTFGPHEQFQDIINSVSGGNDHYILSYDFGSYLDIQNSIDQD
FKDRAKWAKKSIMASVCCGKFSSDRTIKEYAQQIWGIEEWKRPGPVPVSNEEARSLLVPP
PSGSPNDINAISIERLSPLT


Frame B:
---lkhlvqvi*nsv*mvvlslvlwmvqtlkfvmplvmkictslvlvlkrstk*rklfmm
enshqtldglvf*pllkkillvhmnnskilstllvvamiitflvmilvltwifkiqliki
skielnglknqlwlqfvvvnsvqieplksmlnkfgvlkngrdqvqfqfqmkklvly*fhh
hlvhqmismlsqlkdyhl*


Frame C:
---*siwyk*yeiqyewwsyhwyfgwckh*ns*chws*kyvhlwcsf*rgqqskenys*w
kihtrh*mgscfnry*rryfwst*tipryyqlc*wwq*slhs*l*fwfllgyskfn*srf
qr*s*mg*kinygfsllw*iqfr*nh*rvcstnlgy*rmeetrssssfk*rssffisstt
iwftk*yqcyln*kiitfn

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SHL889 (SHL889Q) /CSM/SH/SHL8-D/SHL889Q.Seq.d/                       1174   0.0
SHL702 (SHL702Q) /CSM/SH/SHL7-A/SHL702Q.Seq.d/                       1174   0.0
SHL445 (SHL445Q) /CSM/SH/SHL4-B/SHL445Q.Seq.d/                       1174   0.0
SHL406 (SHL406Q) /CSM/SH/SHL4-A/SHL406Q.Seq.d/                       1174   0.0
SHL246 (SHL246Q) /CSM/SH/SHL2-B/SHL246Q.Seq.d/                       1174   0.0
SHL184 (SHL184Q) /CSM/SH/SHL1-D/SHL184Q.Seq.d/                       1174   0.0
SHK523 (SHK523Q) /CSM/SH/SHK5-A/SHK523Q.Seq.d/                       1174   0.0
SHJ873 (SHJ873Q) /CSM/SH/SHJ8-D/SHJ873Q.Seq.d/                       1174   0.0
SHJ645 (SHJ645Q) /CSM/SH/SHJ6-B/SHJ645Q.Seq.d/                       1174   0.0
SHG886 (SHG886Q) /CSM/SH/SHG8-D/SHG886Q.Seq.d/                       1174   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

M77492|M77492.1 Dictyostelium discoideum glycoprotein phosphorylase 2 (glpD) gene, complete cds.  1174   0.0    1
X62142|X62142.1 D. discoideum glpV gene for glycogen phosphorylase 1.    94   1e-17  3
BX538351|BX538351.1 Cryptosporidium parvum chromosome 6, complete sequence; segment 2/4.    50   1e-09  2
CX648527|CX648527.1 COLD1_29_F01.b1_A029 Root cold Pinus taeda cDNA clone COLD1_29_F01_A029 3', mRNA sequence.    50   6e-05  2
CX648605|CX648605.1 COLD1_29_F01.g1_A029 Root cold Pinus taeda cDNA clone COLD1_29_F01_A029 5', mRNA sequence.    50   6e-05  2
AF542095|AF542095.1 Entamoeba histolytica glycogen phosphorylase-2 mRNA, partial cds.    60   6e-05  1
DT593524|DT593524.1 wmi03-8ms2-h10 Wmi03 Welwitschia mirabilis cDNA clone wmi03-8ms2-h10 5', mRNA sequence.    58   2e-04  1
BI187719|BI187719.1 b2a02fs.r1 Fusarium sporotrichioides Tri 10 overexpressed cDNA library Fusarium sporotrichioides cDNA clone b2a02fs 5', mRNA sequence.    58   2e-04  1
AY635994|AY635994.1 Monacrosporium haptotylum glycogen phosphorylase-like protein (Gph1) mRNA, complete cds.    58   2e-04  1
AX954531|AX954531.1 Sequence 1377 from Patent WO03093306.          54   0.003  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU165056_1(EU165056|pid:none) Cyanophora paradoxa starch phospho...   163   3e-39
AY098895_1(AY098895|pid:none) Citrus hybrid cultivar starch phos...   163   3e-39
(Q9SD76) RecName: Full=Alpha-glucan phosphorylase, H isozyme;   ...   158   9e-38
AK103367_1(AK103367|pid:none) Oryza sativa Japonica Group cDNA c...   157   2e-37
AF326977_1(AF326977|pid:none) Oryza sativa alpha 1,4-glucan phos...   157   2e-37
EF576564_1(EF576564|pid:none) Oryza sativa (indica cultivar-grou...   157   2e-37
(P32811) RecName: Full=Alpha-glucan phosphorylase, H isozyme;   ...   156   4e-37
CP001330_331(CP001330|pid:none) Micromonas sp. RCC299 chromosome...   156   5e-37
EU857639_1(EU857639|pid:none) Zea mays starch phosphorylase 2 pr...   155   6e-37
CR954204_212(CR954204|pid:none) Ostreococcus tauri strain OTTH05...   155   6e-37

 psg: 0.92  gvh: 0.38  alm: 0.47  top: 0.53  tms: 0.00  mit: 0.16  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 32.0 %: nuclear
	 12.0 %: cytoskeletal
	  4.0 %: vesicles of secretory system
	  4.0 %: endoplasmic reticulum

>> prediction for CHR451 is cyt

>CHR451Z.Seq
NNNNNNNNNNTACTGAAGCATCTGGTACAAGTAATATGAAATTCAGTATGAATGGTGGTC
TTATCATTGGTACTTTGGATGGTGCAAACATTGAAATTCGTGATGCCATTGGTCATGAAA
ATATGTACATCTTTGGTGCTCGTTCTGAAGAGGTCAACAAAGTAAAGAAAATTATTCATG
ATGGAAAATTCACACCAGACACTAGATGGGCTCGTGTTTTAACCGCTATTAAAGAAGATA
CTTTTGGTCCACATGAACAATTCCAAGATATTATCAACTCTGTTAGTGGTGGCAATGATC
ATTACATTCTTAGTTATGATTTTGGTTCTTACTTGGATATTCAAAATTCAATTGATCAAG
ATTTCAAAGATAGAGCTAAATGGGCTAAAAAATCAATTATGGCTTCAGTTTGTTGTGGTA
AATTCAGTTCAGATAGAACCATTAAAGAGTATGCTCAACAAATTTGGGGTATTGAAGAAT
GGAAGAGACCAGGTCCAGTTCCAGTTTCAAATGAAGAAGCTCGTTCTTTATTAGTTCCAC
CACCATCTGGTTCACCAAATGATATCAATGCTATCTCAATTGAAAGATTATCACCTTTAA
CT