>CHR430 (CHR430Q) /CSM/CH/CHR4-B/CHR430Q.Seq.d/
CAATAATAACTAAAAAAAAATATAAAATAATAATAATAAAAATGTATCATATTATTTCGT
CAAACATAAATAATATTAATAATAAATCAAATAAACCGAATGATAATAAAAATGATAAAA
CTAAATTTAATTCAAAGATCTTAGTGATTGTATTGATTGGTATAATATTCCATGCAGTAT
TCACATTAAGTATTTTTGATATCTATTTCAGATCACCATTAGTACATGGGATGACACCAC
ATCCTATTAATTTACCAGCTCCAGCAAAAAGATTAGTTTTATTTGTTGCTGATGGATTAA
GAGCAGATAAATTTTTTGAAATTGATGAAAATACAGGTAAATCTAGATCACCATTTTTAA
GAAATATAATTGAAAATAAAGGAACATGGGGTATTTCACATACAAGAGTACCAACAGAGA
CAAGACCAGGACATGTTGCATTGATAGCAGGTTTCTATGAAGATGTTAGTGCGGTTACAA
AGGGATGGAAAGCGAATCCCGTAGAATTTGATCATCTTTTCAATGAAACTACCTATTCAT
TTGGTTAXXXXXXXXXXCTTATGACCGTAATTACAATGGGTTATTTTGGTTGGATCATTA
CACTCTCACTTTATGTATTAAACAATTATACCTCAATTGGCATAGAGAATTGTAATCAAC
AGAAATTAAGCACACAAATGAAAAGATTCAAAACTTTATCAAATTATTTAATCTTTATCG
AAAGTATTGCATTGGTTGGATTCTTATTGGCAACTGATGCTCCATTACTCTATTATCTCT
ATTGTGTGTTTTTAGTATTGTTTTGGGCGAAAACCATTCCATCGAATATTGTACCATTAT
ATATTTTCATTTGCGATTCTTTCTCACAAGTCTCTTCAACTCGTGGTCATTTCATCAATA
CAAATAATAGCGCAAACCTTTCAATCATAAAGAATTTCATCATATTATCAGTCTCTGCCA
TCTCTGTTATGGAGTTATTGGTTGTCTCTTATTTCCATCGTGGTGTACTCTCTTTGTTAT
ATCAAATTTTAGGTGTAGTATCTGTGTTTTTCTTTTACAATCGTTCTGGTGCTGGTAAAA
CTTCAACTTTATTAAAATCACTTTGGCTCATATCTTGCCTTTTAATGTCAATTTTCCCAT
CATTACCAATCGATTATGGTAGTGATACAAAATTGGTTTGTTTTGGTGGTATTTTAATTT
CAATTTTAGGTGTTTTAACAAGTTTATTTAAATTTAGAAATAATTCAAAACAACAACAAC
AATCATCATCATCANCTCAACAAAAA

IITKKKYKIIIIKMYHIISSNINNINNKSNKPNDNKNDKTKFNSKILVIVLIGIIFHAVF
TLSIFDIYFRSPLVHGMTPHPINLPAPAKRLVLFVADGLRADKFFEIDENTGKSRSPFLR
NIIENKGTWGISHTRVPTETRPGHVALIAGFYEDVSAVTKGWKANPVEFDHLFNETTYSF
G---

---LMTVITMGYFGWIITLSLYVLNNYTSIGIENCNQQKLSTQMKRFKTLSNYLIFIESI
ALVGFLLATDAPLLYYLYCVFLVLFWAKTIPSNIVPLYIFICDSFSQVSSTRGHFINTNN
SANLSIIKNFIILSVSAISVMELLVVSYFHRGVLSLLYQILGVVSVFFFYNRSGAGKTST
LLKSLWLISCLLMSIFPSLPIDYGSDTKLVCFGGILISILGVLTSLFKFRNNSKQQQQSS
SSXQQK

Frame A:
q**lkknik****kciilfrqt*iiliinqinrmiikmiklnliqrs**ly*lv*ysmqy
sh*vflisisdhh*ymg*hhilliyqlqqkd*fylllmd*eqinflklmkiqvnldhhf*
ei*lkikehgvfhiqeyqqrqdqdmlh**qvsmkmlvrlqrdgkrip*nliifsmklpih
lv---

---LMTVITMGYFGWIITLSLYVLNNYTSIGIENCNQQKLSTQMKRFKTLSNYLIFIESI
ALVGFLLATDAPLLYYLYCVFLVLFWAKTIPSNIVPLYIFICDSFSQVSSTRGHFINTNN
SANLSIIKNFIILSVSAISVMELLVVSYFHRGVLSLLYQILGVVSVFFFYNRSGAGKTST
LLKSLWLISCLLMSIFPSLPIDYGSDTKLVCFGGILISILGVLTSLFKFRNNSKQQQQSS
SSXQQK

Frame B:
nnn*kki*nnnnknvsyyfvkhk*y***ik*te***k**n*i*fkdlsdcidwynipcsi
hikyf*ylfqitistwddttsy*ftssskkisficc*wiksr*if*n**kyr*i*itifk
kyn*k*rnmgyftykstnrdktrtccidsrfl*rc*cgykgmesesrri*ssfq*nylfi
wl---

---l*p*lqwvilvgslhshfmy*tiipqla*rivinrn*ahk*kdsklyqii*slskvl
hwldsywqlmlhysiisivcf*ycfgrkpfhrilyhyifsfailshkslqlvvissiqii
aqtfqs*rissyyqslpsllwsywlslisivvyslcyikf*v*ylcfsftivlvlvklql
y*nhfgsylaf*cqfshhyqsimvviqnwfvlvvf*fqf*vf*qvylnleiiqnnnnnhh
hxlnk

Frame C:
IITKKKYKIIIIKMYHIISSNINNINNKSNKPNDNKNDKTKFNSKILVIVLIGIIFHAVF
TLSIFDIYFRSPLVHGMTPHPINLPAPAKRLVLFVADGLRADKFFEIDENTGKSRSPFLR
NIIENKGTWGISHTRVPTETRPGHVALIAGFYEDVSAVTKGWKANPVEFDHLFNETTYSF
G---

---ydrnynglfwldhytltlcikqlylnwhrel*steikhtnekiqnfiklfnlyrkyc
igwilign*csitllsllcvfsivlgenhsieyctiiyfhlrffltslfnswsfhqyk**
rkpfnhkefhhiislchlcygvigcllfpswctlfvisnfrcsicvfllqsfwcw*nfnf
ikitlahilpfnvnfpiitnrlw**ykiglfwwyfnfnfrcfnkfi*i*k*fkttttiii
ixstk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHR430 (CHR430Q) /CSM/CH/CHR4-B/CHR430Q.Seq.d/                       2234   0.0
CFH470 (CFH470Q) /CSM/CF/CFH4-C/CFH470Q.Seq.d/                       1439   0.0
CHR776 (CHR776Q) /CSM/CH/CHR7-D/CHR776Q.Seq.d/                       1419   0.0
CHK351 (CHK351Q) /CSM/CH/CHK3-C/CHK351Q.Seq.d/                       1055   0.0
SHL892 (SHL892Q) /CSM/SH/SHL8-D/SHL892Q.Seq.d/                        835   0.0
SHL677 (SHL677Q) /CSM/SH/SHL6-D/SHL677Q.Seq.d/                        835   0.0
AHI564 (AHI564Q) /CSM/AH/AHI5-C/AHI564Q.Seq.d/                        835   0.0
AHC385 (AHC385Q) /CSM/AH/AHC3-D/AHC385Q.Seq.d/                        835   0.0
AHK229 (AHK229Q) /CSM/AH/AHK2-B/AHK229Q.Seq.d/                        827   0.0
CHJ751 (CHJ751Q) /CSM/CH/CHJ7-C/CHJ751Q.Seq.d/                        654   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

BZ298841|BZ298841.1 CG4613.r1 Candida glabrata Random Genomic Library Candida glabratagenomic clone CG4613, genomic survey sequence.    70   1e-12  2
BI658990|BI658990.1 603301318F1 NIH_CGAP_Mam4 Mus musculus cDNA clone IMAGE:5341757 5', mRNA sequence.    62   1e-12  2
CN833314|CN833314.1 AGENCOURT_24959954 NIH_MGC_169 Mus musculus cDNA clone IMAGE:30916797 5', mRNA sequence.    62   4e-12  2
AB030280|AB030280.1 Mus musculus Pig-n mRNA for phosphatidylinositolglycan class N short form, complete cds.    62   5e-12  2
BC021148|BC021148.1 Mus musculus, Similar to phosphatidylinositol glycan, class N, clone MGC:13757 IMAGE:4024793, mRNA, complete cds.    62   6e-12  2
AB030279|AB030279.1 Mus musculus Pig-n mRNA for phosphatidylinositolglycan class N, complete cds.    62   6e-12  2
CX290998|CX290998.1 C03002G05Rv OF1 Citrus clementina cDNA clone C03002G05, mRNA sequence.    84   8e-12  1
AC101652|AC101652.8 Mus musculus chromosome 1, clone RP23-58D20, complete sequence.    62   1e-07  6
CR380959|CR380959.1 Candida glabrata strain CBS138 chromosome M complete sequence.    70   1e-07  1
AB030316|AB030316.2 Mus musculus Pig-n gene for phosphatidylinositolglycan class N, complete cds.    62   2e-07  3

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK315134_1(AK315134|pid:none) Homo sapiens cDNA, FLJ96099, highl...   201   6e-50
DQ976364_1(DQ976364|pid:none) Rattus norvegicus phosphatidylinos...   201   6e-50
AB030280_1(AB030280|pid:none) Mus musculus Pig-n mRNA for phosph...   200   1e-49
AB030279_1(AB030279|pid:none) Mus musculus Pig-n mRNA for phosph...   200   1e-49
AB030316_1(AB030316|pid:none) Mus musculus Pig-n gene for phosph...   199   2e-49
CP000501_79(CP000501|pid:none) Pichia stipitis CBS 6054 chromoso...   176   2e-42
(Q5A3M6) RecName: Full=GPI ethanolamine phosphate transferase 1;...   171   6e-41
FM992688_1126(FM992688|pid:none) Candida dubliniensis CD36 chrom...   171   6e-41
(Q6C0Z3) RecName: Full=GPI ethanolamine phosphate transferase 1;...   170   8e-41
(Q757X5) RecName: Full=GPI ethanolamine phosphate transferase 1;...   170   1e-40

 psg: 0.79  gvh: 0.55  alm: 0.15  top: 0.37  tms: 0.53  mit: 0.34  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 1.00  m3b: 0.00  m_ : 0.00 

	 56.0 %: plasma membrane
	 28.0 %: endoplasmic reticulum
	 12.0 %: mitochondrial
	  4.0 %: nuclear

>> prediction for CHR430 is pla

>CHR430F.Seq
CAATAATAACTAAAAAAAAATATAAAATAATAATAATAAAAATGTATCATATTATTTCGT
CAAACATAAATAATATTAATAATAAATCAAATAAACCGAATGATAATAAAAATGATAAAA
CTAAATTTAATTCAAAGATCTTAGTGATTGTATTGATTGGTATAATATTCCATGCAGTAT
TCACATTAAGTATTTTTGATATCTATTTCAGATCACCATTAGTACATGGGATGACACCAC
ATCCTATTAATTTACCAGCTCCAGCAAAAAGATTAGTTTTATTTGTTGCTGATGGATTAA
GAGCAGATAAATTTTTTGAAATTGATGAAAATACAGGTAAATCTAGATCACCATTTTTAA
GAAATATAATTGAAAATAAAGGAACATGGGGTATTTCACATACAAGAGTACCAACAGAGA
CAAGACCAGGACATGTTGCATTGATAGCAGGTTTCTATGAAGATGTTAGTGCGGTTACAA
AGGGATGGAAAGCGAATCCCGTAGAATTTGATCATCTTTTCAATGAAACTACCTATTCAT
TTGGTTANNNNNNNNNN

>CHR430Z.Seq
NNNNNNNNNNCTTATGACCGTAATTACAATGGGTTATTTTGGTTGGATCATTACACTCTC
ACTTTATGTATTAAACAATTATACCTCAATTGGCATAGAGAATTGTAATCAACAGAAATT
AAGCACACAAATGAAAAGATTCAAAACTTTATCAAATTATTTAATCTTTATCGAAAGTAT
TGCATTGGTTGGATTCTTATTGGCAACTGATGCTCCATTACTCTATTATCTCTATTGTGT
GTTTTTAGTATTGTTTTGGGCGAAAACCATTCCATCGAATATTGTACCATTATATATTTT
CATTTGCGATTCTTTCTCACAAGTCTCTTCAACTCGTGGTCATTTCATCAATACAAATAA
TAGCGCAAACCTTTCAATCATAAAGAATTTCATCATATTATCAGTCTCTGCCATCTCTGT
TATGGAGTTATTGGTTGTCTCTTATTTCCATCGTGGTGTACTCTCTTTGTTATATCAAAT
TTTAGGTGTAGTATCTGTGTTTTTCTTTTACAATCGTTCTGGTGCTGGTAAAACTTCAAC
TTTATTAAAATCACTTTGGCTCATATCTTGCCTTTTAATGTCAATTTTCCCATCATTACC
AATCGATTATGGTAGTGATACAAAATTGGTTTGTTTTGGTGGTATTTTAATTTCAATTTT
AGGTGTTTTAACAAGTTTATTTAAATTTAGAAATAATTCAAAACAACAACAACAATCATC
ATCATCANCTCAACAAAAA

>CHR430P.Seq
CAATAATAACTAAAAAAAAATATAAAATAATAATAATAAAAATGTATCATATTATTTCGT
CAAACATAAATAATATTAATAATAAATCAAATAAACCGAATGATAATAAAAATGATAAAA
CTAAATTTAATTCAAAGATCTTAGTGATTGTATTGATTGGTATAATATTCCATGCAGTAT
TCACATTAAGTATTTTTGATATCTATTTCAGATCACCATTAGTACATGGGATGACACCAC
ATCCTATTAATTTACCAGCTCCAGCAAAAAGATTAGTTTTATTTGTTGCTGATGGATTAA
GAGCAGATAAATTTTTTGAAATTGATGAAAATACAGGTAAATCTAGATCACCATTTTTAA
GAAATATAATTGAAAATAAAGGAACATGGGGTATTTCACATACAAGAGTACCAACAGAGA
CAAGACCAGGACATGTTGCATTGATAGCAGGTTTCTATGAAGATGTTAGTGCGGTTACAA
AGGGATGGAAAGCGAATCCCGTAGAATTTGATCATCTTTTCAATGAAACTACCTATTCAT
TTGGTTA----------CTTATGACCGTAATTACAATGGGTTATTTTGGTTGGATCATTA
CACTCTCACTTTATGTATTAAACAATTATACCTCAATTGGCATAGAGAATTGTAATCAAC
AGAAATTAAGCACACAAATGAAAAGATTCAAAACTTTATCAAATTATTTAATCTTTATCG
AAAGTATTGCATTGGTTGGATTCTTATTGGCAACTGATGCTCCATTACTCTATTATCTCT
ATTGTGTGTTTTTAGTATTGTTTTGGGCGAAAACCATTCCATCGAATATTGTACCATTAT
ATATTTTCATTTGCGATTCTTTCTCACAAGTCTCTTCAACTCGTGGTCATTTCATCAATA
CAAATAATAGCGCAAACCTTTCAATCATAAAGAATTTCATCATATTATCAGTCTCTGCCA
TCTCTGTTATGGAGTTATTGGTTGTCTCTTATTTCCATCGTGGTGTACTCTCTTTGTTAT
ATCAAATTTTAGGTGTAGTATCTGTGTTTTTCTTTTACAATCGTTCTGGTGCTGGTAAAA
CTTCAACTTTATTAAAATCACTTTGGCTCATATCTTGCCTTTTAATGTCAATTTTCCCAT
CATTACCAATCGATTATGGTAGTGATACAAAATTGGTTTGTTTTGGTGGTATTTTAATTT
CAATTTTAGGTGTTTTAACAAGTTTATTTAAATTTAGAAATAATTCAAAACAACAACAAC
AATCATCATCATCANCTCAACAAAAA