>CHQ763 (CHQ763Q) /CSM/CH/CHQ7-C/CHQ763Q.Seq.d/
XXXXXXXXXXCCNGGGGNTTNNNNNAAANNAAAAAGNTTTAAAAAAAAANNAAAAATNAT
NAAAAANNAAAAAAAAATNAAAAAAAAACTTTTAAAACTNTCCNTTTACTTTTTGGGGGT
TTTGNTAANGTAANGGTAAGGGGTTTNTTTCCCCCTTTGNTTTGC

---xgxxxxkkx*KKXKNXXKXKKNXKKTFKTXXLLFGGFXXVXVRGXFPPLXC

Frame A:
---xgxxxxxkxlkkxxkxxkxkkkxkknf*nxpftfwgfx*xxgkgfxspfxl


Frame B:
---xgxxxxkkx*KKXKNXXKXKKNXKKTFKTXXLLFGGFXXVXVRGXFPPLXC


Frame C:
---gxxxkxkxfkkkxkxxkxxkkxkkkllklsxyflgvlxx*x*gvxfplxf

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHQ763 (CHQ763Q) /CSM/CH/CHQ7-C/CHQ763Q.Seq.d/                        111   3e-24
VHQ166 (VHQ166Q) /CSM/VH/VHQ1-C/VHQ166Q.Seq.d/                         88   5e-17
SSA761 (SSA761Q) /CSM/SS/SSA7-C/SSA761Q.Seq.d/                         66   2e-10
SSA137 (SSA137Q) /CSM/SS/SSA1-B/SSA137Q.Seq.d/                         56   2e-07
SSA131 (SSA131Q) /CSM/SS/SSA1-B/SSA131Q.Seq.d/                         56   2e-07
SSB645 (SSB645Q) /CSM/SS/SSB6-B/SSB645Q.Seq.d/                         50   1e-05
SSD650 (SSD650Q) /CSM/SS/SSD6-C/SSD650Q.Seq.d/                         48   4e-05
SHF560 (SHF560Q) /CSM/SH/SHF5-C/SHF560Q.Seq.d/                         44   6e-04
SHD516 (SHD516Q) /CSM/SH/SHD5-A/SHD516Q.Seq.d/                         42   0.002
CHR817 (CHR817Q) /CSM/CH/CHR8-A/CHR817Q.Seq.d/                         42   0.002

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

BX550533|BX550533.1 Glossina morsitans morsitans (Tseatse fly) EST from adult infected midgut library, clone Tse113d04_p1c.    36   0.16   2
DR869949|DR869949.1 JGI_CABG10888.rev NIH_XGC_tropSto1 Xenopus tropicalis cDNA clone CABG10888 3', mRNA sequence.    38   0.35   2
DT231687|DT231687.1 JGI_CAAT5522.rev CAAT Pimephales promelas brain 7-8 month adults, males and females pooled (M) Pimephales promelas cDNA clone CAAT5522 3', mRNA sequence.    32   0.60   2
DT210123|DT210123.1 JGI_CAAS16336.rev CAAS Pimephales promelas brain 7-8 month adults, males and females pooled (H) Pimephales promelas cDNA clone CAAS16336 3', mRNA sequence.    32   2.2    2
BF859062|BF859062.1 RC5-FT0194-271200-014-C04 FT0194 Homo sapiens cDNA, mRNA sequence.    32   2.2    2

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3101297
Number of Hits to DB: 110,558,264

 psg: 0.49  gvh: 0.54  alm: 0.46  top: 0.53  tms: 0.00  mit: 0.36  mip: 0.00
 nuc: 0.12  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: nuclear
	 24.0 %: mitochondrial
	 24.0 %: cytoplasmic
	  4.0 %: cytoskeletal
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system

>> prediction for CHQ763 is nuc

>CHQ763Z.Seq
NNNNNNNNNNCCNGGGGNTTNNNNNAAANNAAAAAGNTTTAAAAAAAAANNAAAAATNAT
NAAAAANNAAAAAAAAATNAAAAAAAAACTTTTAAAACTNTCCNTTTACTTTTTGGGGGT
TTTGNTAANGTAANGGTAAGGGGTTTNTTTCCCCCTTTGNTTTGC