>CHQ531 (CHQ531Q) /CSM/CH/CHQ5-B/CHQ531Q.Seq.d/
ATTGTTAATTCAGTAGTTCAATTTAATTTATAATAATAATAATAGTATAAATATATAAAG
ATTAATTTTTTTGTATATAAATTTTTGTAAATAAATAAATAAATAATAATTTTTTTTTTA
ATTCACACACATACATATAAATATTAAATAATTAAATATTAAAAAATGTCATCAATTGGT
ATTGATTTAGGTACAACATATTCATGTGTTGGTGTTTGGCAAAATGATCGTGTTGAAATT
ATTGCAAATGATCAAGGTAATAGAACCACTCCATCTTATGTTGCATTTACTGATACAGAA
CGTTTAATTGGTGATGCTGCAAAGAATCAAGTTGCAATGAATCCAACCAATACAGTATTT
GATGCTAAACGTTTAATTGGTCGTAAATTTAGTGACAAAGAAGTTCAAAGTGATATGAAA
CATTGGCCATTCAAAGTATTCCAAAGGATGGTGATAAGCCACATATTCAAGTTGAATTCA
AAGGTGAAACTAAAGTTTTCTCACCANAAGAAATCTCTTCAATGGTACTCTTAAAAATGA
AAGAAACCGCTGAAGCTTATCTTGGTAAAACCATTAATAATGCTGTXXXXXXXXXXTTAT
TCCAAGAAATACANCAATTCCATGTAAGAAAACTCAAACCTTCTCTACATACTCTGATAA
TCAACCAGGTGTATTAATTCAAGTTTATGAAGGTGAACGTGCTATGACCAAAGATAATAA
TTTATTGGGTAAATTTGAACTTTCTGGTATTCCACCAGCACCAAGAGGTGTACCACAAGT
TGAAGTTACATTTGATGTTGATGCAAATGGTATCTTAAATGTATCAGCTGAAGATAAATC
AACTGGTAACAAACAAAAGATTACAATTACCAATGATAAAGGTCGTCTTTCAAAAGAAGA
AATTGAAAAAATGGTTGCTGATGCAGAGAAATTCAAACAACAAGATGAACAACAAAAAGA
TCGTGTTGAATCAAAGAATAAATTGGAAAATTATGCATTCACTGTTAAAAATTCAATTAA
AGATGAAAAAGTTGCAGCCAAAATTTCAGATTCAGATAAATCAACTATTGAATCTGAAAC
TGAAAGTGTACTCAAATGGTTAGAATCAAATCAAACCGCAGAAAAGGATGAATATGAAGA
TAAGATGAAAGCCTTAGAAGCAGTTGTCAATCCAATCATGAGTAAACTCTATCAAGAAGG
AGGTATGCCACAAGGTGGTGGTATGCCAGGTGGTATGTCAAATGATTCACCAAAGAGTTC
AAACAACAAAGTAGACGAATTAGATTGACGGAATTTTTCAGAGGAAAACATCTCTATCAA
ATAGATTTCTTAAAAAATAATAAGTTAGTAAAATCAATAAAGCTTNCTCATATATA

c*fsssi*fiiiiiv*iykd*ffci*ifvnk*innnfffnshtyi*ilnn*ilknvinwy
*frynifmcwclak*sc*nyck*sr**nhsilcciy*yrtfnw*cckesscnesnqysi*
c*tfnws*i**qrssk*YETLAIQSIPKDGDKPHIQVEFKGETKVFSPXEISSMVLLKMK
ETAEAYLGKTINNA---

---IPRNTXIPCKKTQTFSTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRG
VPQVEVTFDVDANGILNVSAEDKSTGNKQKITITNDKGRLSKEEIEKMVADAEKFKQQDE
QQKDRVESKNKLENYAFTVKNSIKDEKVAAKISDSDKSTIESETESVLKWLESNQTAEKD
EYEDKMKALEAVVNPIMSKLYQEGGMPQGGGMPGGMSNDSPKSSNNKVDELD*rnfseen
isik*is*kiis**nq*sxliy

Frame A:
ivnsvvqfnl*****ykyikinffvykfl*ink*iiifflihthtyky*iiky*kmssig
idlgttyscvgvwqndrveiiandqgnrttpsyvaftdterligdaaknqvamnptntvf
dakrligrkfsdkevqsdmkhwpfkvfqrmvishifklnskvklkfshxkkslqwys*k*
kkplklilvkpliml---

---lfqeixqfhvrklkpslhtliinqvy*fkfmkvnvl*pkiiiywvnlnflvfhqhqe
vyhklklhlmlmqmvs*myqlkinqlvtnkrlqlpmikvvfqkkklkkwllmqrnsnnkm
nnkkivlnqrinwkimhsllkiqlkmkklqpkfqiqinqllnlklkvysng*nqikpqkr
mnmkir*kp*kqlsiqs*vnsikkevchkvvvcqvvcqmihqrvqttk*tn*idgifqrk
tslsnrflkk**vskinkaxsyi

Frame B:
lliq*fnliynnnnsini*rliflyinfck*ink**fff*fthihinik*lnikkchqlv
li*vqhihvlvfgkmivlkllqmikvieplhlmlhlliqnv*lvmlqriklq*iqpiqyl
mlnv*lvvnlvtkkfkvi*nighskyskgw**atyss*iqr*n*sfltxrnlfngtlkne
rnr*slsw*nh**cc---

---yskkyxnsm*ensnllyil**strcinssl*r*tcydqr**fig*i*tfwyststkr
ctts*syi*c*ckwylkcis*r*inw*qtkdynyq**rssfkrrn*kngc*creiqttr*
ttkrsc*ike*igklcihc*kfn*r*kscsqnfrfr*iny*i*n*kctqmvriksnrrkg
*i*r*deslrsscqsnhe*tlsrrryatrwwyarwyvk*ftkefkqqsrrirlteffrgk
hlyqidflknnklvksiklxhi

Frame C:
c*fsssi*fiiiiiv*iykd*ffci*ifvnk*innnfffnshtyi*ilnn*ilknvinwy
*frynifmcwclak*sc*nyck*sr**nhsilcciy*yrtfnw*cckesscnesnqysi*
c*tfnws*i**qrssk*YETLAIQSIPKDGDKPHIQVEFKGETKVFSPXEISSMVLLKMK
ETAEAYLGKTINNA---

---IPRNTXIPCKKTQTFSTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRG
VPQVEVTFDVDANGILNVSAEDKSTGNKQKITITNDKGRLSKEEIEKMVADAEKFKQQDE
QQKDRVESKNKLENYAFTVKNSIKDEKVAAKISDSDKSTIESETESVLKWLESNQTAEKD
EYEDKMKALEAVVNPIMSKLYQEGGMPQGGGMPGGMSNDSPKSSNNKVDELD*rnfseen
isik*is*kiis**nq*sxliy

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHQ531 (CHQ531Q) /CSM/CH/CHQ5-B/CHQ531Q.Seq.d/                       2415   0.0
VHH751 (VHH751Q) /CSM/VH/VHH7-C/VHH751Q.Seq.d/                       1526   0.0
AHD344 (AHD344Q) /CSM/AH/AHD3-B/AHD344Q.Seq.d/                       1526   0.0
VHP236 (VHP236Q) /CSM/VH/VHP2-B/VHP236Q.Seq.d/                       1524   0.0
VHB518 (VHB518Q) /CSM/VH/VHB5-A/VHB518Q.Seq.d/                       1524   0.0
CHS341 (CHS341Q) /CSM/CH/CHS3-B/CHS341Q.Seq.d/                       1524   0.0
CHM178 (CHM178Q) /CSM/CH/CHM1-D/CHM178Q.Seq.d/                       1524   0.0
VHP224 (VHP224Q) /CSM/VH/VHP2-A/VHP224Q.Seq.d/                       1520   0.0
VHH614 (VHH614Q) /CSM/VH/VHH6-A/VHH614Q.Seq.d/                       1520   0.0
SFG805 (SFG805Q) /CSM/SF/SFG8-A/SFG805Q.Seq.d/                       1520   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

X75263|X75263.1 D.discoideum (AX3) mRNA for heat shock cognate protein (hsc70).  1518   0.0    1
L22736|L22736.1 Dictyostelium discoideum heat shock protein (hspB) gene,.  1511   0.0    1
AF025951|AF025951.1 Dictyostelium discoideum heat-shock cognate protein 70 (hsc70) mRNA, complete cds.   252   e-138  7
AC115684|AC115684.2 Dictyostelium discoideum chromosome 2 map 3108975-3191114 strain AX4, complete sequence.   252   e-128  12
AF221541|AF221541.1 Cryptosporidium serpentis heat shock protein 70 (HSP70) gene, partial cds.   145   2e-95  9
A58313|A58313.1 Sequence 1 from Patent WO9636707.                 133   2e-94  7
Z30210|Z30210.1 C.albicans (ATCC 20955) cahsp70 mRNA for heat shock protein 70.   133   6e-94  7
AX536934|AX536934.1 Sequence 535 from Patent WO02064766.          133   4e-92  7
DQ060426|DQ060426.1 Cryptosporidium andersoni strain zzca heat shock protein 70-like gene, partial sequence.   127   2e-85  8
AY954892|AY954892.1 Cryptosporidium andersoni strain HenanZhzhca heat shock protein 70 gene, partial cds.   123   4e-85  9

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P36415) RecName: Full=Heat shock cognate 70 kDa protein 1;     ...   389   e-106
S37394(S37394) dnaK-type molecular chaperone hsc70 - slime mold ...   389   e-106
(Q54BE0) RecName: Full=Heat shock cognate 70 kDa protein 3;           288   4e-76
AF033852_1(AF033852|pid:none) Spinacia oleracea cytosolic heat s...   286   9e-76
FB790108_1(FB790108|pid:none) Sequence 9381 from Patent WO200803...   286   1e-75
(Q557E0) RecName: Full=Heat shock cognate 70 kDa protein 2;     ...   286   1e-75
AF025951_1(AF025951|pid:none) Dictyostelium discoideum heat-shoc...   286   1e-75
FB790112_1(FB790112|pid:none) Sequence 9385 from Patent WO200803...   285   3e-75
(P22953) RecName: Full=Heat shock cognate 70 kDa protein 1;     ...   285   3e-75
S46302(S46302;S41402;JA0169;S36623) dnaK-type molecular chaperon...   285   3e-75

 psg: 0.44  gvh: 0.33  alm: 0.49  top: 0.53  tms: 0.00  mit: 0.21  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: nuclear
	 28.0 %: cytoplasmic
	  8.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system

>> prediction for CHQ531 is nuc

>CHQ531F.Seq
ATTGTTAATTCAGTAGTTCAATTTAATTTATAATAATAATAATAGTATAAATATATAAAG
ATTAATTTTTTTGTATATAAATTTTTGTAAATAAATAAATAAATAATAATTTTTTTTTTA
ATTCACACACATACATATAAATATTAAATAATTAAATATTAAAAAATGTCATCAATTGGT
ATTGATTTAGGTACAACATATTCATGTGTTGGTGTTTGGCAAAATGATCGTGTTGAAATT
ATTGCAAATGATCAAGGTAATAGAACCACTCCATCTTATGTTGCATTTACTGATACAGAA
CGTTTAATTGGTGATGCTGCAAAGAATCAAGTTGCAATGAATCCAACCAATACAGTATTT
GATGCTAAACGTTTAATTGGTCGTAAATTTAGTGACAAAGAAGTTCAAAGTGATATGAAA
CATTGGCCATTCAAAGTATTCCAAAGGATGGTGATAAGCCACATATTCAAGTTGAATTCA
AAGGTGAAACTAAAGTTTTCTCACCANAAGAAATCTCTTCAATGGTACTCTTAAAAATGA
AAGAAACCGCTGAAGCTTATCTTGGTAAAACCATTAATAATGCTGTNNNNNNNNNN

>CHQ531Z.Seq
NNNNNNNNNNTTATTCCAAGAAATACANCAATTCCATGTAAGAAAACTCAAACCTTCTCT
ACATACTCTGATAATCAACCAGGTGTATTAATTCAAGTTTATGAAGGTGAACGTGCTATG
ACCAAAGATAATAATTTATTGGGTAAATTTGAACTTTCTGGTATTCCACCAGCACCAAGA
GGTGTACCACAAGTTGAAGTTACATTTGATGTTGATGCAAATGGTATCTTAAATGTATCA
GCTGAAGATAAATCAACTGGTAACAAACAAAAGATTACAATTACCAATGATAAAGGTCGT
CTTTCAAAAGAAGAAATTGAAAAAATGGTTGCTGATGCAGAGAAATTCAAACAACAAGAT
GAACAACAAAAAGATCGTGTTGAATCAAAGAATAAATTGGAAAATTATGCATTCACTGTT
AAAAATTCAATTAAAGATGAAAAAGTTGCAGCCAAAATTTCAGATTCAGATAAATCAACT
ATTGAATCTGAAACTGAAAGTGTACTCAAATGGTTAGAATCAAATCAAACCGCAGAAAAG
GATGAATATGAAGATAAGATGAAAGCCTTAGAAGCAGTTGTCAATCCAATCATGAGTAAA
CTCTATCAAGAAGGAGGTATGCCACAAGGTGGTGGTATGCCAGGTGGTATGTCAAATGAT
TCACCAAAGAGTTCAAACAACAAAGTAGACGAATTAGATTGACGGAATTTTTCAGAGGAA
AACATCTCTATCAAATAGATTTCTTAAAAAATAATAAGTTAGTAAAATCAATAAAGCTTN
CTCATATATA

>CHQ531P.Seq
ATTGTTAATTCAGTAGTTCAATTTAATTTATAATAATAATAATAGTATAAATATATAAAG
ATTAATTTTTTTGTATATAAATTTTTGTAAATAAATAAATAAATAATAATTTTTTTTTTA
ATTCACACACATACATATAAATATTAAATAATTAAATATTAAAAAATGTCATCAATTGGT
ATTGATTTAGGTACAACATATTCATGTGTTGGTGTTTGGCAAAATGATCGTGTTGAAATT
ATTGCAAATGATCAAGGTAATAGAACCACTCCATCTTATGTTGCATTTACTGATACAGAA
CGTTTAATTGGTGATGCTGCAAAGAATCAAGTTGCAATGAATCCAACCAATACAGTATTT
GATGCTAAACGTTTAATTGGTCGTAAATTTAGTGACAAAGAAGTTCAAAGTGATATGAAA
CATTGGCCATTCAAAGTATTCCAAAGGATGGTGATAAGCCACATATTCAAGTTGAATTCA
AAGGTGAAACTAAAGTTTTCTCACCANAAGAAATCTCTTCAATGGTACTCTTAAAAATGA
AAGAAACCGCTGAAGCTTATCTTGGTAAAACCATTAATAATGCTGT----------TTAT
TCCAAGAAATACANCAATTCCATGTAAGAAAACTCAAACCTTCTCTACATACTCTGATAA
TCAACCAGGTGTATTAATTCAAGTTTATGAAGGTGAACGTGCTATGACCAAAGATAATAA
TTTATTGGGTAAATTTGAACTTTCTGGTATTCCACCAGCACCAAGAGGTGTACCACAAGT
TGAAGTTACATTTGATGTTGATGCAAATGGTATCTTAAATGTATCAGCTGAAGATAAATC
AACTGGTAACAAACAAAAGATTACAATTACCAATGATAAAGGTCGTCTTTCAAAAGAAGA
AATTGAAAAAATGGTTGCTGATGCAGAGAAATTCAAACAACAAGATGAACAACAAAAAGA
TCGTGTTGAATCAAAGAATAAATTGGAAAATTATGCATTCACTGTTAAAAATTCAATTAA
AGATGAAAAAGTTGCAGCCAAAATTTCAGATTCAGATAAATCAACTATTGAATCTGAAAC
TGAAAGTGTACTCAAATGGTTAGAATCAAATCAAACCGCAGAAAAGGATGAATATGAAGA
TAAGATGAAAGCCTTAGAAGCAGTTGTCAATCCAATCATGAGTAAACTCTATCAAGAAGG
AGGTATGCCACAAGGTGGTGGTATGCCAGGTGGTATGTCAAATGATTCACCAAAGAGTTC
AAACAACAAAGTAGACGAATTAGATTGACGGAATTTTTCAGAGGAAAACATCTCTATCAA
ATAGATTTCTTAAAAAATAATAAGTTAGTAAAATCAATAAAGCTTNCTCATATATA