>CHQ519 (CHQ519Q) /CSM/CH/CHQ5-A/CHQ519Q.Seq.d/
TTTACAATCGCAGGAACCAATGTACCAATTGGACCACAAAAGTTTTCATTTGTATTCCAT
GGTGAAAATGGTCAATTTGATTGGGCTGATAGTTGTCCACAATGTGTTGATGGTGTTCAA
TTTCCTTGTTTAATTACAAATGGAATTGGTATCCAGTCATGTGGATCCGATCTACTTTGG
ACAAAATGTAATTGTACAATCTTGTAATGAAGGCTATAATTATAATTCACTCAAGAATAC
TTGTGATAAATTCTTATCATACAATTATATTATCATTATCGTTGCAGGTGGTACTATGGT
ATTGATTATACTATTACTAATGTGGATAAAGTATCAAGAATATAAAGAGAGTAAAAGGGA
TAGTTTCCGTAGATTCGATGATGGTACAGGTATTTTCGTTAGACCAAAGGATAAAGATGC
AAAAGTTACGCCCCCTGATCTTTATAATTTAGTTTCACCATTCATTATCGAATTAACAAT
TGCCACAGCATGTTCATTGGTCGCAACAGCAGCAAGTATCTTACAGCCATTCTATATTGG
TAATATTGTAAACAACATCCCAACAACTAAAAGCATTGGTGAATTTAAGAGTGATTTCAT
TATTATCTTCATATTGGCATTCATTGAATTTTTAXXXXXXXXXXAGGTGAAATTGAATTT
AAGAATGTATCATTCNGTTATCCAACTAGACCAGATGTACAAGTTTTACATAATATCAAT
ATGAAATTTGAAGCTGGTAAATGCTATGGTTTGGTTGGTCCTTCAGGTAGTGGTAAATCA
ACAACATTGGAATTGATTTCAAAATTCTATCCACTTCATGGCGAGACTGGTGGTAAAATT
TACATGGATGGTATTGATATTGCAAAAATTAGACCAAACAATCTTAGAAGTTTCGTTACA
AACGTTCATCAACATCCTTTCCTATTCGATGCTACGATTGGTGAAAACATTGGTTATGCA
ATTGATAATCCAACTCAAGAGGATATCATTGAAGCTGCCAAATTGGCATATGCTCATGAA
TTCATTAATGATTTACCAAAGAAGTATGATACTCAAATTGGAGAAGCTGGTAATTTATCA
GGTGGTCAAAAGAAAAGAATTGCAGTAGCTCGTGCAATTTGTGCAAAGAGAAAGATTATG
TTATTGGATGAAATCACTGCTGAGTTAGATCCAGAATCTGAAGAAGCCATTACTCAAAGT
ATTAAAGTTTTAACTCAAGGTCATACCGTTGTAATGGTAGCTCATAAAGTTGCTGCTGTA
CGTGATTGTGATAAAATCTTTGTTTTAGAGAAAGGTTATTTAGTTGAAGAAGGTACTCAT
GACGAACTCATGGCAAATAAAGGAAAATATTATAGAATGTTTAGGAAGATAAAGANATAC
TCCTTTACAAAATAATAATAATATTAAAAAAAA

lqsqepmyqldhksfhlysmvkmvnliglivvhnvlmvfnflv*LQMELVSSHVDPIYFG
QNVIVQSCNEGYNYNSLKNTCDKFLSYNYIIIIVAGGTMVLIILLLMWIKYQEYKESKRD
SFRRFDDGTGIFVRPKDKDAKVTPPDLYNLVSPFIIELTIATACSLVATAASILQPFYIG
NIVNNIPTTKSIGEFKSDFIIIFILAFIEFL---

---GEIEFKNVSFXYPTRPDVQVLHNINMKFEAGKCYGLVGPSGSGKSTTLELISKFYPL
HGETGGKIYMDGIDIAKIRPNNLRSFVTNVHQHPFLFDATIGENIGYAIDNPTQEDIIEA
AKLAYAHEFINDLPKKYDTQIGEAGNLSGGQKKRIAVARAICAKRKIMLLDEITAELDPE
SEEAITQSIKVLTQGHTVVMVAHKVAAVRDCDKIFVLEKGYLVEEGTHDELMANKGKYYR
MFRKIKXYSFTK***y*kk

Frame A:
ftiagtnvpigpqkfsfvfhgengqfdwadscpqcvdgvqfpclitngigiqscgsdllw
tkcnctil**rl*l*ftqeyl**iliiqlyyhyrcrwyygidytitnvdkvsri*re*kg
*fp*ir*wyryfr*tkg*rcksyap*sl*fsftihyrinnchsmfigrnsskyltailyw
*yckqhpnn*khw*i*e*fhyylhigih*if---

---r*n*i*eciixlsn*trctsft*yqyei*sw*mlwfgwsfr*w*innigidfkilst
swrdww*nlhgwy*yckn*tkqs*kfrykrsstsfpircydw*khwlcn**snsrgyh*s
cqigics*ih**ftkev*ysnwrsw*firwskekncssscnlckekdyvig*nhc*vrsr
i*rshysky*sfnsrsyrcngss*sccct*l**nlcfrerlfs*rrys*rthgk*rkil*
nv*edkxillykiiiilkk

Frame B:
lqsqepmyqldhksfhlysmvkmvnliglivvhnvlmvfnflv*LQMELVSSHVDPIYFG
QNVIVQSCNEGYNYNSLKNTCDKFLSYNYIIIIVAGGTMVLIILLLMWIKYQEYKESKRD
SFRRFDDGTGIFVRPKDKDAKVTPPDLYNLVSPFIIELTIATACSLVATAASILQPFYIG
NIVNNIPTTKSIGEFKSDFIIIFILAFIEFL---

---GEIEFKNVSFXYPTRPDVQVLHNINMKFEAGKCYGLVGPSGSGKSTTLELISKFYPL
HGETGGKIYMDGIDIAKIRPNNLRSFVTNVHQHPFLFDATIGENIGYAIDNPTQEDIIEA
AKLAYAHEFINDLPKKYDTQIGEAGNLSGGQKKRIAVARAICAKRKIMLLDEITAELDPE
SEEAITQSIKVLTQGHTVVMVAHKVAAVRDCDKIFVLEKGYLVEEGTHDELMANKGKYYR
MFRKIKXYSFTK***y*kk

Frame C:
ynrrnqctnwttkvficipw*kwsi*lg**lstmc*wcsislfnykwnwypvmwirstld
km*lynlvmkaiiiihsrilvinsyhtiilslslqvvlwy*lyyy*cg*siknikrvkgi
vsvdsmmvqvfsldqrikmqklrplifii*fhhslsn*qlpqhvhwsqqqqvsyshsilv
il*ttsqqlkalvnlrvisllssywhslnf---

---vklnlrmyhsviqldqmykfyiisi*nlklvnamvwlvlqvvvnqqhwn*fqnsihf
marlvvkftwmvlilqkldqtilevslqtfinilsysmlrlvktlvmqliiqlkrislkl
pnwhmlmnslmiyqrsmilkleklviyqvvkrkelq*lvqfvqrerlcywmkslls*iqn
lkkpllkvlkf*lkvipl*w*liklllyvivikslf*rkvi*lkkvlmtnswqikeniie
clgr*rxtplqnnnnikk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHQ519 (CHQ519Q) /CSM/CH/CHQ5-A/CHQ519Q.Seq.d/                       2714   0.0
CFI746 (CFI746Q) /CSM/CF/CFI7-B/CFI746Q.Seq.d/                       1237   0.0
SHE286 (SHE286Q) /CSM/SH/SHE2-D/SHE286Q.Seq.d/                       1134   0.0
AHO630 (AHO630Q) /CSM/AH/AHO6-B/AHO630Q.Seq.d/                        821   0.0
CHG524 (CHG524Q) /CSM/CH/CHG5-A/CHG524Q.Seq.d/                        745   0.0
AFL219 (AFL219Q) /CSM/AF/AFL2-A/AFL219Q.Seq.d/                        745   0.0
SFK215 (SFK215Q) /CSM/SF/SFK2-A/SFK215Q.Seq.d/                        704   0.0
SFK163 (SFK163Q) /CSM/SF/SFK1-C/SFK163Q.Seq.d/                        589   e-167
SHK420 (SHK420Q) /CSM/SH/SHK4-A/SHK420Q.Seq.d/                        478   e-133
CHK654 (CHK654Q) /CSM/CH/CHK6-C/CHK654Q.Seq.d/                        478   e-133

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

U20432|U20432.1 Dictyostelium discoideum TagB (tagB) gene, complete cds.  1421   0.0    2
U60086|U60086.1 Dictyostelium discoideum multidrug resistance transporter/Ser protease (tagC) mRNA, complete cds.   478   0.0    12
AF466309|AF466309.1 Dictyostelium discoideum serine protease/ABC transporter TagD (tagD) gene, complete cds.   426   0.0    11
AF482386|AF482386.1 Dictyostelium discoideum ABC transporter AbcG7 (abcG7) gene, complete cds.    50   4e-08  4
AE006279|AE006279.1 Lactococcus lactis subsp. lactis IL1403 section 41 of 218 of the complete genome.    64   3e-06  2
AF466307|AF466307.2 Dictyostelium discoideum ABC transporter AbcB4 (abcB4) gene, complete cds.    48   6e-04  4
BD407929|BD407929.1 A novel Bacteriocin.                           56   0.002  1
BD407927|BD407927.1 A novel Bacteriocin.                           56   0.002  1
AB066267|AB066267.1 Enterococcus mundtii genes for mundticin KS precursor,  ATP-dependent transporter, mundticin KS immunity protein, complete cds.    56   0.002  1
AY398693|AY398693.1 Enterococcus mundtii strain CRL35 enterocin CRL35 (munA), enterocin CRL 35 ATP-dependent transporter (mun B), and enterocin CRL 35 immunity protein (munC) genes, complete cds.    56   0.002  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P54683) RecName: Full=Prestalk-specific protein tagB;          ...   481   e-134
T18267(T18267) multidrug resistance protein - slime mold (Dictyo...   481   e-134
(Q8T9W1) RecName: Full=Serine protease/ABC transporter tagD;    ...   409   e-113
(Q23868) RecName: Full=Prestalk-specific protein tagC;          ...   407   e-112
T18279(T18279) multidrug resistance transport protein - slime mo...   407   e-112
DQ157431_1(DQ157431|pid:none) Canis lupus familiaris ATP-binding...   219   2e-55
CS016619_1(CS016619|pid:none) Sequence 3 from Patent WO2005010039.    219   2e-55
CS016623_1(CS016623|pid:none) Sequence 7 from Patent WO2005010039.    219   2e-55
CS016617_1(CS016617|pid:none) Sequence 1 from Patent WO2005010039.    219   2e-55
AF099732_1(AF099732|pid:none) Fundulus heteroclitus multidrug re...   215   3e-54

 psg: 0.75  gvh: 0.29  alm: 0.12  top: 0.73  tms: 0.20  mit: 0.19  mip: 0.00
 nuc: 0.06  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 1.00  m_ : 0.00 

	 28.0 %: plasma membrane
	 20.0 %: endoplasmic reticulum
	 16.0 %: vacuolar
	 16.0 %: nuclear
	 12.0 %: mitochondrial
	  4.0 %: Golgi
	  4.0 %: cytoplasmic

>> prediction for CHQ519 is pla

>CHQ519F.Seq
TTTACAATCGCAGGAACCAATGTACCAATTGGACCACAAAAGTTTTCATTTGTATTCCAT
GGTGAAAATGGTCAATTTGATTGGGCTGATAGTTGTCCACAATGTGTTGATGGTGTTCAA
TTTCCTTGTTTAATTACAAATGGAATTGGTATCCAGTCATGTGGATCCGATCTACTTTGG
ACAAAATGTAATTGTACAATCTTGTAATGAAGGCTATAATTATAATTCACTCAAGAATAC
TTGTGATAAATTCTTATCATACAATTATATTATCATTATCGTTGCAGGTGGTACTATGGT
ATTGATTATACTATTACTAATGTGGATAAAGTATCAAGAATATAAAGAGAGTAAAAGGGA
TAGTTTCCGTAGATTCGATGATGGTACAGGTATTTTCGTTAGACCAAAGGATAAAGATGC
AAAAGTTACGCCCCCTGATCTTTATAATTTAGTTTCACCATTCATTATCGAATTAACAAT
TGCCACAGCATGTTCATTGGTCGCAACAGCAGCAAGTATCTTACAGCCATTCTATATTGG
TAATATTGTAAACAACATCCCAACAACTAAAAGCATTGGTGAATTTAAGAGTGATTTCAT
TATTATCTTCATATTGGCATTCATTGAATTTTTANNNNNNNNNN

>CHQ519Z.Seq
NNNNNNNNNNAGGTGAAATTGAATTTAAGAATGTATCATTCNGTTATCCAACTAGACCAG
ATGTACAAGTTTTACATAATATCAATATGAAATTTGAAGCTGGTAAATGCTATGGTTTGG
TTGGTCCTTCAGGTAGTGGTAAATCAACAACATTGGAATTGATTTCAAAATTCTATCCAC
TTCATGGCGAGACTGGTGGTAAAATTTACATGGATGGTATTGATATTGCAAAAATTAGAC
CAAACAATCTTAGAAGTTTCGTTACAAACGTTCATCAACATCCTTTCCTATTCGATGCTA
CGATTGGTGAAAACATTGGTTATGCAATTGATAATCCAACTCAAGAGGATATCATTGAAG
CTGCCAAATTGGCATATGCTCATGAATTCATTAATGATTTACCAAAGAAGTATGATACTC
AAATTGGAGAAGCTGGTAATTTATCAGGTGGTCAAAAGAAAAGAATTGCAGTAGCTCGTG
CAATTTGTGCAAAGAGAAAGATTATGTTATTGGATGAAATCACTGCTGAGTTAGATCCAG
AATCTGAAGAAGCCATTACTCAAAGTATTAAAGTTTTAACTCAAGGTCATACCGTTGTAA
TGGTAGCTCATAAAGTTGCTGCTGTACGTGATTGTGATAAAATCTTTGTTTTAGAGAAAG
GTTATTTAGTTGAAGAAGGTACTCATGACGAACTCATGGCAAATAAAGGAAAATATTATA
GAATGTTTAGGAAGATAAAGANATACTCCTTTACAAAATAATAATAATATTAAAAAAAA

>CHQ519P.Seq
TTTACAATCGCAGGAACCAATGTACCAATTGGACCACAAAAGTTTTCATTTGTATTCCAT
GGTGAAAATGGTCAATTTGATTGGGCTGATAGTTGTCCACAATGTGTTGATGGTGTTCAA
TTTCCTTGTTTAATTACAAATGGAATTGGTATCCAGTCATGTGGATCCGATCTACTTTGG
ACAAAATGTAATTGTACAATCTTGTAATGAAGGCTATAATTATAATTCACTCAAGAATAC
TTGTGATAAATTCTTATCATACAATTATATTATCATTATCGTTGCAGGTGGTACTATGGT
ATTGATTATACTATTACTAATGTGGATAAAGTATCAAGAATATAAAGAGAGTAAAAGGGA
TAGTTTCCGTAGATTCGATGATGGTACAGGTATTTTCGTTAGACCAAAGGATAAAGATGC
AAAAGTTACGCCCCCTGATCTTTATAATTTAGTTTCACCATTCATTATCGAATTAACAAT
TGCCACAGCATGTTCATTGGTCGCAACAGCAGCAAGTATCTTACAGCCATTCTATATTGG
TAATATTGTAAACAACATCCCAACAACTAAAAGCATTGGTGAATTTAAGAGTGATTTCAT
TATTATCTTCATATTGGCATTCATTGAATTTTTA----------AGGTGAAATTGAATTT
AAGAATGTATCATTCNGTTATCCAACTAGACCAGATGTACAAGTTTTACATAATATCAAT
ATGAAATTTGAAGCTGGTAAATGCTATGGTTTGGTTGGTCCTTCAGGTAGTGGTAAATCA
ACAACATTGGAATTGATTTCAAAATTCTATCCACTTCATGGCGAGACTGGTGGTAAAATT
TACATGGATGGTATTGATATTGCAAAAATTAGACCAAACAATCTTAGAAGTTTCGTTACA
AACGTTCATCAACATCCTTTCCTATTCGATGCTACGATTGGTGAAAACATTGGTTATGCA
ATTGATAATCCAACTCAAGAGGATATCATTGAAGCTGCCAAATTGGCATATGCTCATGAA
TTCATTAATGATTTACCAAAGAAGTATGATACTCAAATTGGAGAAGCTGGTAATTTATCA
GGTGGTCAAAAGAAAAGAATTGCAGTAGCTCGTGCAATTTGTGCAAAGAGAAAGATTATG
TTATTGGATGAAATCACTGCTGAGTTAGATCCAGAATCTGAAGAAGCCATTACTCAAAGT
ATTAAAGTTTTAACTCAAGGTCATACCGTTGTAATGGTAGCTCATAAAGTTGCTGCTGTA
CGTGATTGTGATAAAATCTTTGTTTTAGAGAAAGGTTATTTAGTTGAAGAAGGTACTCAT
GACGAACTCATGGCAAATAAAGGAAAATATTATAGAATGTTTAGGAAGATAAAGANATAC
TCCTTTACAAAATAATAATAATATTAAAAAAAA