>CHQ207 (CHQ207Q) /CSM/CH/CHQ2-A/CHQ207Q.Seq.d/
ATTTATTGTTAAAAGAATTATCAACAATTTCACAAGATGCAATCATTGTTATCAGTTCAT
TAACAAAAGATATGTCACATAAGATTGAATTATATAGAGCAAATGCAATTAGAATTTTAT
GTAAAATCACTGATAGTTCAATTTTACCACAAATCGAAAGATACTTTAAACAAAGTATTG
TTGAAAAAGATCCACACGTATCATCAGCAGCACTTGTTTCAAGTATTCATTTATTAAAGG
TATGTCCAGAGATTGTAAAGAGATGGGCAAATGAAGTTCAAGAAGCAATCTCAAATAAAT
CAAATATGGTTCAATATCATGCATTAGCATTATTACATAGAATTAAACAACATGATCGTT
TAGCAGTCTCTAAATTGGTTAGTAATTTAATTAAAAATTCACTTCGTTCACCATATGCTC
AATCATATTTAATTAGATGTTGTGTTXXXXXXXXXXCAAATGTATCTGTTAAAATGGTAC
CTTCCGATCCAAAATTATTAAAATATGAATGTTCAATCCCAATCGATGTACTCCCATACG
GTGAACCACAACAATGTTATGTTGCCATTCGTTACATTCCTGCCAATGGTTATCCATTAT
GTTCATTCAGTAATGCCCTCAAATTCAAAGTTAAAGAAGTCGATCCATCCACTGGTGAAC
TCGATGAACCAGGCTATGATGATCAATACAGTTTAGAGAGATTGGAAATCGTTCCAAAAG
ATTTCCTCAATAGAGCTTTCGTTGGTAACTTTTCCGAGGAATGGAAGAAAATGTCTGAAG
ATACCCAATTAGTTCAAACCTTTTCTTTAGTTGGTGTTAAATCTATCGATGAAGCTGTAA
AACAAATCATTAAAACATTAGGTATGGCCCCTGCTGAAAAATCTGAAGTTGTCACTCCAA
AATCTGCCAAACATATCCTTTATCTCACTGGTATATCATTAAATAATCAATTGATGTTAN
GTTAGAGCAAGAATGAAGTTGGATCAATGTCAAAGT

LLLKELSTISQDAIIVISSLTKDMSHKIELYRANAIRILCKITDSSILPQIERYFKQSIV
EKDPHVSSAALVSSIHLLKVCPEIVKRWANEVQEAISNKSNMVQYHALALLHRIKQHDRL
AVSKLVSNLIKNSLRSPYAQSYLIRCCV---

---NVSVKMVPSDPKLLKYECSIPIDVLPYGEPQQCYVAIRYIPANGYPLCSFSNALKFK
VKEVDPSTGELDEPGYDDQYSLERLEIVPKDFLNRAFVGNFSEEWKKMSEDTQLVQTFSL
VGVKSIDEAVKQIIKTLGMAPAEKSEVVTPKSAKHILYLTGISLNNQLMLX*sknevgsm
sk

Frame A:
iyc*knyqqfhkmqsllsvh*qkichirlnyieqmqlefyvkslivqfyhkskdtlnkvl
lkkihtyhqqhlfqvfiy*ryvqrl*rdgqmkfkkqsqinqiwfnimh*hyyielnnmiv
*qslnwlvi*lkihfvhhmlnhi*ldvv---

---qmyllkwylpiqny*nmnvqsqsmyshtvnhnnvmlpfvtflpmvihyvhsvmpsns
klkksihplvnsmnqammintv*rdwksfqkissielslvtfprngrkclkipn*fkpfl
*lvlnlsmkl*nkslkh*vwpllknlklslqnlpnisfislvyh*iin*cxvrarmkldq
cqs

Frame B:
fivkriinnftrcnhcyqfinkryvt*d*ii*skcn*nfm*nh**fnfttnrkil*tkyc
*krstriisstcfkysfikgmsrdckemgk*ssrsnlk*ikygsiscisiit*n*tt*sf
ssl*ig**fn*kftsfticsiifn*mlc---

---kcic*ngtfrskiiki*mfnpnrctpir*tttmlcchslhscqwlsimfiq*cpqiq
s*rsrsihw*tr*trl**siqfreignrskrfpq*sfrw*lfrgmeenv*rypissnlff
swc*iyr*scktnh*nirygpc*ki*schskicqtyplshwyiik*sidvxleqe*swin
vk

Frame C:
LLLKELSTISQDAIIVISSLTKDMSHKIELYRANAIRILCKITDSSILPQIERYFKQSIV
EKDPHVSSAALVSSIHLLKVCPEIVKRWANEVQEAISNKSNMVQYHALALLHRIKQHDRL
AVSKLVSNLIKNSLRSPYAQSYLIRCCV---

---NVSVKMVPSDPKLLKYECSIPIDVLPYGEPQQCYVAIRYIPANGYPLCSFSNALKFK
VKEVDPSTGELDEPGYDDQYSLERLEIVPKDFLNRAFVGNFSEEWKKMSEDTQLVQTFSL
VGVKSIDEAVKQIIKTLGMAPAEKSEVVTPKSAKHILYLTGISLNNQLMLX*sknevgsm
sk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHQ207 (CHQ207Q) /CSM/CH/CHQ2-A/CHQ207Q.Seq.d/                       1909   0.0
VHP318 (VHP318Q) /CSM/VH/VHP3-A/VHP318Q.Seq.d/                       1029   0.0
VHB433 (VHB433Q) /CSM/VH/VHB4-B/VHB433Q.Seq.d/                       1029   0.0
AHN272 (AHN272Q) /CSM/AH/AHN2-C/AHN272Q.Seq.d/                       1029   0.0
AHH171 (AHH171Q) /CSM/AH/AHH1-C/AHH171Q.Seq.d/                       1029   0.0
AHD268 (AHD268Q) /CSM/AH/AHD2-C/AHD268Q.Seq.d/                       1029   0.0
AFD520 (AFD520Q) /CSM/AF/AFD5-A/AFD520Q.Seq.d/                       1029   0.0
VHL633 (VHL633Q) /CSM/VH/VHL6-B/VHL633Q.Seq.d/                       1023   0.0
VHJ794 (VHJ794Q) /CSM/VH/VHJ7-D/VHJ794Q.Seq.d/                       1021   0.0
VHP330 (VHP330Q) /CSM/VH/VHP3-B/VHP330Q.Seq.d/                       1013   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

BG310515|BG310515.1 SWOv3MCAM56C04SK Onchocerca volvulus molting L3 larva cDNAmRNA sequence.    34   7e-06  3
BG445287|BG445287.1 GA__Ea0027I23f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ea0027I23f, mRNA sequence.    52   0.023  1
AL359768|AL359768.17 Human DNA sequence *** SEQUENCING IN PROGRESS *** from clone  RP11-533E16.    38   0.12   5
AC147082|AC147082.2 Mus musculus BAC clone RP23-321E5 from chromosome 9, complete sequence.    48   0.35   1
AC117219|AC117219.2 Mus musculus BAC clone RP23-344D18 from chromosome 9, complete sequence.    48   0.35   1
AM047747|AM047747.1 Schistosoma mansoni lung schistosomulum EST, clone SmlC45g09.q1k.    36   0.43   3
AC115598|AC115598.2 Dictyostelium discoideum chromosome 2 map 581427-735498 strain AX4, complete sequence.    32   0.51   9
AE017332|AE017332.1 Mycoplasma hyopneumoniae 232, complete genome.    34   0.82   14
AL928982|AL928982.8 Human DNA sequence *** SEQUENCING IN PROGRESS *** from clone  XXyac-23DC2.    46   1.4    1
AL135920|AL135920.12 Human DNA sequence from clone RP11-514L15 on chromosome Xq27.1-28.  Contains GSSs.    46   1.4    1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q0WW26) RecName: Full=Coatomer subunit gamma; AltName: Full=Gam...   190   7e-47
AL023094_3(AL023094|pid:none) Arabidopsis thaliana DNA chromosom...   188   2e-46
AC146746_8(AC146746|pid:none) Medicago truncatula clone mth2-108...   187   4e-46
BT055935_1(BT055935|pid:none) Zea mays full-length cDNA clone ZM...   185   2e-45
(Q8H852) RecName: Full=Coatomer subunit gamma-1; AltName: Full=G...   184   3e-45
BT053959_1(BT053959|pid:none) Zea mays full-length cDNA clone ZM...   183   9e-45
Z68880_5(Z68880|pid:none) Caenorhabditis elegans Cosmid T14G10, ...   179   1e-43
(P53620) RecName: Full=Coatomer subunit gamma; AltName: Full=Gam...   166   8e-40
BT045480_1(BT045480|pid:none) Salmo salar clone ssal-rgf-522-272...   166   8e-40
AY113545_1(AY113545|pid:none) Drosophila melanogaster RE62270 fu...   166   1e-39

 psg: 0.72  gvh: 0.37  alm: 0.37  top: 0.53  tms: 0.00  mit: 0.26  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 56.0 %: cytoplasmic
	 32.0 %: nuclear
	  8.0 %: mitochondrial
	  4.0 %: vesicles of secretory system

>> prediction for CHQ207 is cyt

>CHQ207F.Seq
ATTTATTGTTAAAAGAATTATCAACAATTTCACAAGATGCAATCATTGTTATCAGTTCAT
TAACAAAAGATATGTCACATAAGATTGAATTATATAGAGCAAATGCAATTAGAATTTTAT
GTAAAATCACTGATAGTTCAATTTTACCACAAATCGAAAGATACTTTAAACAAAGTATTG
TTGAAAAAGATCCACACGTATCATCAGCAGCACTTGTTTCAAGTATTCATTTATTAAAGG
TATGTCCAGAGATTGTAAAGAGATGGGCAAATGAAGTTCAAGAAGCAATCTCAAATAAAT
CAAATATGGTTCAATATCATGCATTAGCATTATTACATAGAATTAAACAACATGATCGTT
TAGCAGTCTCTAAATTGGTTAGTAATTTAATTAAAAATTCACTTCGTTCACCATATGCTC
AATCATATTTAATTAGATGTTGTGTTNNNNNNNNNN

>CHQ207Z.Seq
NNNNNNNNNNCAAATGTATCTGTTAAAATGGTACCTTCCGATCCAAAATTATTAAAATAT
GAATGTTCAATCCCAATCGATGTACTCCCATACGGTGAACCACAACAATGTTATGTTGCC
ATTCGTTACATTCCTGCCAATGGTTATCCATTATGTTCATTCAGTAATGCCCTCAAATTC
AAAGTTAAAGAAGTCGATCCATCCACTGGTGAACTCGATGAACCAGGCTATGATGATCAA
TACAGTTTAGAGAGATTGGAAATCGTTCCAAAAGATTTCCTCAATAGAGCTTTCGTTGGT
AACTTTTCCGAGGAATGGAAGAAAATGTCTGAAGATACCCAATTAGTTCAAACCTTTTCT
TTAGTTGGTGTTAAATCTATCGATGAAGCTGTAAAACAAATCATTAAAACATTAGGTATG
GCCCCTGCTGAAAAATCTGAAGTTGTCACTCCAAAATCTGCCAAACATATCCTTTATCTC
ACTGGTATATCATTAAATAATCAATTGATGTTANGTTAGAGCAAGAATGAAGTTGGATCA
ATGTCAAAGT

>CHQ207P.Seq
ATTTATTGTTAAAAGAATTATCAACAATTTCACAAGATGCAATCATTGTTATCAGTTCAT
TAACAAAAGATATGTCACATAAGATTGAATTATATAGAGCAAATGCAATTAGAATTTTAT
GTAAAATCACTGATAGTTCAATTTTACCACAAATCGAAAGATACTTTAAACAAAGTATTG
TTGAAAAAGATCCACACGTATCATCAGCAGCACTTGTTTCAAGTATTCATTTATTAAAGG
TATGTCCAGAGATTGTAAAGAGATGGGCAAATGAAGTTCAAGAAGCAATCTCAAATAAAT
CAAATATGGTTCAATATCATGCATTAGCATTATTACATAGAATTAAACAACATGATCGTT
TAGCAGTCTCTAAATTGGTTAGTAATTTAATTAAAAATTCACTTCGTTCACCATATGCTC
AATCATATTTAATTAGATGTTGTGTT----------CAAATGTATCTGTTAAAATGGTAC
CTTCCGATCCAAAATTATTAAAATATGAATGTTCAATCCCAATCGATGTACTCCCATACG
GTGAACCACAACAATGTTATGTTGCCATTCGTTACATTCCTGCCAATGGTTATCCATTAT
GTTCATTCAGTAATGCCCTCAAATTCAAAGTTAAAGAAGTCGATCCATCCACTGGTGAAC
TCGATGAACCAGGCTATGATGATCAATACAGTTTAGAGAGATTGGAAATCGTTCCAAAAG
ATTTCCTCAATAGAGCTTTCGTTGGTAACTTTTCCGAGGAATGGAAGAAAATGTCTGAAG
ATACCCAATTAGTTCAAACCTTTTCTTTAGTTGGTGTTAAATCTATCGATGAAGCTGTAA
AACAAATCATTAAAACATTAGGTATGGCCCCTGCTGAAAAATCTGAAGTTGTCACTCCAA
AATCTGCCAAACATATCCTTTATCTCACTGGTATATCATTAAATAATCAATTGATGTTAN
GTTAGAGCAAGAATGAAGTTGGATCAATGTCAAAGT