>CHP710 (CHP710Q) /CSM/CH/CHP7-A/CHP710Q.Seq.d/
AAAAAGNATAATATAATTCAAATCATCAATAATAACAACAAAATTAGTAGTAAGAGAACC
CAAAGTTTAAATAAAAGAAAGCTCAAACCTAACATTATTAGTAGTAGTAAAAAAAGTAGT
AGTAGTAGTATTATTATTTTTAGGAGAAACCAGTTATAATATTAATAACAATAAAAATAA
TAATAAAAATAAAAAAATGAGCAGTAGTGGTAAAACAGAAAAAATGTCTTTTTTTTAAGA
AAATGGGCAATAATAATAATAGTGGTAGTAGTGGTATTAGTAGTGGTAGTAGTGGTAGTA
GTAGTAGTAGTAAAAAGAAATCATCATCCTCATCATCTTCATCATCTTCATCATCGTCAT
CATCATCTACAGCAATACCAACATCAATAACAAATATAAAAAGTAGAAGTCAATCTACTG
ATGGTCTAGGTAACCAATCATGGATATTTAATTTAAAAATTAGTACTTATAAAACCATTG
AAGCTAAAGTTGGATCAAAAGTTAAACTAAATATAAAGAATAGACAAGATGCACCACTTA
AAAAAGGTGATAGATTCTTTTTTTCAATXXXXXXXXXXTGCAAATATTGATAATAATAAT
ATGATTATGGGTGGGTAATATTAATTGTAGTGGTAGTGATGGACAAATGTTAATTAATGG
TGGTATTGGTGTTGGAGGTAGTGGTAATAGTAGTGGTGGCGGTGGTGGAGGTGGTAGTGG
TGGTACAAACTTTTATTTAAGTAAAGAATCAATTCTTAATAATCTTGGTTTAAATGGAAA
GAAAGAGATATCATATGCACATTTATTAGCAAGTGAAAATGATAATGATCTAATTGGTGA
TGAATTAGATTGCAATGGTGTTCCACTTAAATATGACCCAACCTTTTTAGATAACTCTGA
ATTGAAAACTGGAAAACATAGAACCGTAATGAATTTACCAAGTTATAAAGTATCGATTTT
CCCATTCATAAAGAAAGGTGCAATCAAAGAGGAATTAAATGAACAGTTTAGACAAAAACA
TCAATGGATTAGTCAACCTGGTATTACATTATATAAAATTAGAAAGATTAAAAGAAAGCT
AAAGAAAAAAGGTTTGATATCAGTAAAAAAGAAGTATTGGCTTCAGAATTTTTAGTTTTC
TCTCAATTATCTTTTACTNCTTTTCGTTTNCTCAATTTGATGTTTTACCTCATTTAAATA
GATTAAAATCAGAAGCTGTAGAAGNATGAAGAATTAATATTTTAAAAATAGTTATAAATT
NATANTTTT

kx*ynsnhq**qqn***enpkfk*kkaqt*hy****kk****yyyf*ekpviilitikii
ikikk*AVVVKQKKCLFFKKMGNNNNSGSSGISSGSSGSSSSSKKKSSSSSSSSSSSSSS
SSTAIPTSITNIKSRSQSTDGLGNQSWIFNLKISTYKTIEAKVGSKVKLNIKNRQDAPLK
KGDRFFFS---

---ANIDNNNMIMGG*y*l*w**wtnvn*wwywcwr*w***wwrwwrw*wwykllfk*ri
ns**swfkwkerdiictfisk*k***snw**irlqwcst*i*pnlfr*l*ienwkt*nrn
eftkl*sidfpihkercnqrgik*tv*tktsmd*stwyyii*n*kd*kkakekrfdiskk
evlaseflvfsqlsftxfrxlnlmfyli*id*nqkl*kxeelif*k*l*ixxf

Frame A:
kkxniiqiinnnnkisskrtqslnkrklkpniissskksssssiiifrrnql*y**q*k*
**k*kneq*w*nrknvfflrkwaiiiivvvvvlvvvvvvvvvvvkrnhhphhlhhlhhrh
hhlqqyqhq*qi*kvevnllmv*vtnhgyli*klvlikplklkldqkln*i*ridkmhhl
kkvidsffq---

---cky****ydygwvilivvvvmdkc*lmvvlvlevvvivvvavvevvvvvqtfi*vkn
qfliilv*merkryhmhiy*qvkmimi*lvmn*iamvfhlnmtqpf*itln*kleniep*
*iyqvikyrfshs*rkvqskrn*mnsldkninglvnlvlhyiklerlkes*rkkv*yq*k
rsigfrifsflsiifyxfsfxqfdvlphlnrlkseavex*rinilkivinxxf

Frame B:
kxii*fkssiittklvvrepkv*ikessnltllvvvkkvvvvvllflgetsyninnnknn
nknkkmsssgktekmsff*engq****w**wy**w**w******keiiiliifiifiivi
iiysntninnkykk*ksiy*wsr*pimdi*fkn*yl*nh*s*swiks*tkyke*trctt*
kr**ilffn---

---ANIDNNNMIMGG*y*l*w**wtnvn*wwywcwr*w***wwrwwrw*wwykllfk*ri
ns**swfkwkerdiictfisk*k***snw**irlqwcst*i*pnlfr*l*ienwkt*nrn
eftkl*sidfpihkercnqrgik*tv*tktsmd*stwyyii*n*kd*kkakekrfdiskk
evlaseflvfsqlsftxfrxlnlmfyli*id*nqkl*kxeelif*k*l*ixxf

Frame C:
kx*ynsnhq**qqn***enpkfk*kkaqt*hy****kk****yyyf*ekpviilitikii
ikikk*AVVVKQKKCLFFKKMGNNNNSGSSGISSGSSGSSSSSKKKSSSSSSSSSSSSSS
SSTAIPTSITNIKSRSQSTDGLGNQSWIFNLKISTYKTIEAKVGSKVKLNIKNRQDAPLK
KGDRFFFS---

---qiliiii*lwvgnincsgsdgqmlinggigvggsgnssgggggggsggtnfylskes
ilnnlglngkkeisyahllasendndligdeldcngvplkydptfldnselktgkhrtvm
nlpsykvsifpfikkgaikeelneqfrqkhqwisqpgitlykirkikrklkkkglisvkk
kywlqnf*fslnyllllfvxsi*cftsfk*ikirscrxmkn*yfknsykxix

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFI407 (SFI407Q) /CSM/SF/SFI4-A/SFI407Q.Seq.d/                        652   0.0
CHP710 (CHP710Q) /CSM/CH/CHP7-A/CHP710Q.Seq.d/                        652   0.0
CFF494 (CFF494Q) /CSM/CF/CFF4-D/CFF494Q.Seq.d/                        569   e-161
SFI307 (SFI307Q) /CSM/SF/SFI3-A/SFI307Q.Seq.d/                        563   e-159
CFC873 (CFC873Q) /CSM/CF/CFC8-D/CFC873Q.Seq.d/                        438   e-122
AFJ764 (AFJ764Q) /CSM/AF/AFJ7-C/AFJ764Q.Seq.d/                        377   e-103
VSA548 (VSA548Q) /CSM/VS/VSA5-B/VSA548Q.Seq.d/                         40   0.081
VSA525 (VSA525Q) /CSM/VS/VSA5-B/VSA525Q.Seq.d/                         40   0.081
SSE790 (SSE790Q) /CSM/SS/SSE7-D/SSE790Q.Seq.d/                         40   0.081
VSC284 (VSC284Q) /CSM/VS/VSC2-D/VSC284Q.Seq.d/                         38   0.32

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC117070|AC117070.2 Dictyostelium discoideum chromosome 2 map 2097701-2233941 strain AX4, complete sequence.   644   0.0    12
AC116979|AC116979.3 Dictyostelium discoideum chromosome 2 map 6445720-6776760 strain AX4, complete sequence.    42   2e-08  18
AE014821|AE014821.1 Plasmodium falciparum 3D7 chromosome 14 section 6 of 13 of the complete sequence.    36   3e-07  15
AL844506|AL844506.1 Plasmodium falciparum chromosome  7.           40   7e-07  19
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence.    34   2e-06  18
BA000026|BA000026.2 Mycoplasma penetrans HF-2 DNA, complete genome.    34   3e-06  30
AC117072|AC117072.3 Dictyostelium discoideum chromosome 2 map 3879572-4071762 strain AX4, complete sequence.    40   6e-06  16
AC116977|AC116977.2 Dictyostelium discoideum chromosome 2 map 5515173-5817331 strain AX4, complete sequence.    38   2e-05  19
AC005140|AC005140.8 Plasmodium falciparum chromosome 12 clone 3D7, *** SEQUENCING IN PROGRESS ***, 4 unordered pieces.    34   2e-05  16
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence.    36   2e-05  24

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR382398_54(CR382398|pid:none) Plasmodium falciparum chromosome ...    59   3e-07
BC145142_1(BC145142|pid:none) Mus musculus CDK5 and Abl enzyme s...    51   9e-05
(Q9ESJ1) RecName: Full=CDK5 and ABL1 enzyme substrate 1; AltName...    50   1e-04
AF328140_1(AF328140|pid:none) Mus musculus cdk3-binding protein ...    50   1e-04
AE013599_1834(AE013599|pid:none) Drosophila melanogaster chromos...    50   1e-04
AF145634_1(AF145634|pid:none) Drosophila melanogaster clone GH06...    50   1e-04
BC037218_1(BC037218|pid:none) Homo sapiens Cdk5 and Abl enzyme s...    50   2e-04
BC118711_1(BC118711|pid:none) Xenopus tropicalis cDNA clone IMAG...    50   2e-04
BC088607_1(BC088607|pid:none) Xenopus tropicalis Cdk5 and Abl en...    50   2e-04
BC159128_1(BC159128|pid:none) Xenopus tropicalis Cdk5 and Abl en...    50   2e-04

 psg: 0.74  gvh: 0.53  alm: 0.57  top: 0.53  tms: 0.00  mit: 0.64  mip: 0.18
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 84.0 %: mitochondrial
	 12.0 %: cytoplasmic
	  4.0 %: nuclear

>> prediction for CHP710 is mit

>CHP710F.Seq
AAAAAGNATAATATAATTCAAATCATCAATAATAACAACAAAATTAGTAGTAAGAGAACC
CAAAGTTTAAATAAAAGAAAGCTCAAACCTAACATTATTAGTAGTAGTAAAAAAAGTAGT
AGTAGTAGTATTATTATTTTTAGGAGAAACCAGTTATAATATTAATAACAATAAAAATAA
TAATAAAAATAAAAAAATGAGCAGTAGTGGTAAAACAGAAAAAATGTCTTTTTTTTAAGA
AAATGGGCAATAATAATAATAGTGGTAGTAGTGGTATTAGTAGTGGTAGTAGTGGTAGTA
GTAGTAGTAGTAAAAAGAAATCATCATCCTCATCATCTTCATCATCTTCATCATCGTCAT
CATCATCTACAGCAATACCAACATCAATAACAAATATAAAAAGTAGAAGTCAATCTACTG
ATGGTCTAGGTAACCAATCATGGATATTTAATTTAAAAATTAGTACTTATAAAACCATTG
AAGCTAAAGTTGGATCAAAAGTTAAACTAAATATAAAGAATAGACAAGATGCACCACTTA
AAAAAGGTGATAGATTCTTTTTTTCAATNNNNNNNNNN

>CHP710Z.Seq
NNNNNNNNNNTGCAAATATTGATAATAATAATATGATTATGGGTGGGTAATATTAATTGT
AGTGGTAGTGATGGACAAATGTTAATTAATGGTGGTATTGGTGTTGGAGGTAGTGGTAAT
AGTAGTGGTGGCGGTGGTGGAGGTGGTAGTGGTGGTACAAACTTTTATTTAAGTAAAGAA
TCAATTCTTAATAATCTTGGTTTAAATGGAAAGAAAGAGATATCATATGCACATTTATTA
GCAAGTGAAAATGATAATGATCTAATTGGTGATGAATTAGATTGCAATGGTGTTCCACTT
AAATATGACCCAACCTTTTTAGATAACTCTGAATTGAAAACTGGAAAACATAGAACCGTA
ATGAATTTACCAAGTTATAAAGTATCGATTTTCCCATTCATAAAGAAAGGTGCAATCAAA
GAGGAATTAAATGAACAGTTTAGACAAAAACATCAATGGATTAGTCAACCTGGTATTACA
TTATATAAAATTAGAAAGATTAAAAGAAAGCTAAAGAAAAAAGGTTTGATATCAGTAAAA
AAGAAGTATTGGCTTCAGAATTTTTAGTTTTCTCTCAATTATCTTTTACTNCTTTTCGTT
TNCTCAATTTGATGTTTTACCTCATTTAAATAGATTAAAATCAGAAGCTGTAGAAGNATG
AAGAATTAATATTTTAAAAATAGTTATAAATTNATANTTTT

>CHP710P.Seq
AAAAAGNATAATATAATTCAAATCATCAATAATAACAACAAAATTAGTAGTAAGAGAACC
CAAAGTTTAAATAAAAGAAAGCTCAAACCTAACATTATTAGTAGTAGTAAAAAAAGTAGT
AGTAGTAGTATTATTATTTTTAGGAGAAACCAGTTATAATATTAATAACAATAAAAATAA
TAATAAAAATAAAAAAATGAGCAGTAGTGGTAAAACAGAAAAAATGTCTTTTTTTTAAGA
AAATGGGCAATAATAATAATAGTGGTAGTAGTGGTATTAGTAGTGGTAGTAGTGGTAGTA
GTAGTAGTAGTAAAAAGAAATCATCATCCTCATCATCTTCATCATCTTCATCATCGTCAT
CATCATCTACAGCAATACCAACATCAATAACAAATATAAAAAGTAGAAGTCAATCTACTG
ATGGTCTAGGTAACCAATCATGGATATTTAATTTAAAAATTAGTACTTATAAAACCATTG
AAGCTAAAGTTGGATCAAAAGTTAAACTAAATATAAAGAATAGACAAGATGCACCACTTA
AAAAAGGTGATAGATTCTTTTTTTCAAT----------TGCAAATATTGATAATAATAAT
ATGATTATGGGTGGGTAATATTAATTGTAGTGGTAGTGATGGACAAATGTTAATTAATGG
TGGTATTGGTGTTGGAGGTAGTGGTAATAGTAGTGGTGGCGGTGGTGGAGGTGGTAGTGG
TGGTACAAACTTTTATTTAAGTAAAGAATCAATTCTTAATAATCTTGGTTTAAATGGAAA
GAAAGAGATATCATATGCACATTTATTAGCAAGTGAAAATGATAATGATCTAATTGGTGA
TGAATTAGATTGCAATGGTGTTCCACTTAAATATGACCCAACCTTTTTAGATAACTCTGA
ATTGAAAACTGGAAAACATAGAACCGTAATGAATTTACCAAGTTATAAAGTATCGATTTT
CCCATTCATAAAGAAAGGTGCAATCAAAGAGGAATTAAATGAACAGTTTAGACAAAAACA
TCAATGGATTAGTCAACCTGGTATTACATTATATAAAATTAGAAAGATTAAAAGAAAGCT
AAAGAAAAAAGGTTTGATATCAGTAAAAAAGAAGTATTGGCTTCAGAATTTTTAGTTTTC
TCTCAATTATCTTTTACTNCTTTTCGTTTNCTCAATTTGATGTTTTACCTCATTTAAATA
GATTAAAATCAGAAGCTGTAGAAGNATGAAGAATTAATATTTTAAAAATAGTTATAAATT
NATANTTTT