>CHP636 (CHP636Q) /CSM/CH/CHP6-B/CHP636Q.Seq.d/
XXXXXXXXXXGCCNCCCCTTTAGCNCAAANANAACGTGTCGAAAANGGTANAACAANTGA
TGGTGGTCCCCTNTATANAAAGGATCCNACTTGGGNTGAAGGTTTAATNTNTGCTGCAAA
ATTTGTTGCCCNAGCCNCTAAAGCTTTGGTAGATAANGCCAACAANACAGCATTTGGTCA
ANAGATCCCAGGTGGNACANAANAAGCTNTCATTGCAACTTNGANGGCTGNAACTGCTGC
AACTTTTCAATTGGTNTNTGCTTGTAAATTTAAATTTGANATCAATAGTCCTTTTCAACA
TAAACTTTCAAANGCTGCCAAATCCGNATCCAANGCAACCNATTTTTTAGTGGNTGCANC
CAAANCTGTCNCTGNTAAAGTNGCCTTTGAANAGGANATCGATTTCGATAAACTCNCTGT
CNCNGGTTATAAAGTTAAANAAATGGAA

---XPLAQXXRVEXGXTXDGGPLYXKDPTWXEGLXXAAKFVAXAXKALVDXANXTAFGQX
IPGGTXXAXIATXXAXTAATFQLVXACKFKFXINSPFQHKLSXAAKSXSXATXFLVXAXK
XVXXKVAFEXXIDFDKLXVXGYKVKXME

Frame A:
---ppl*xkxnvskxvxqxmvvpxixrixlgxkv*xxlqnllpxplklw*ixptxqhlvx
rsqvxxxklslqlxxlxllqlfnwxxlvnlnlxsivlfninfqxlpnpxpxqpif*wxxp
xlslxkxplxrxsisinslsxviklxkw


Frame B:
---xpfsxxxtcrkxxnx*wwspxxkgsxlg*rfnxcckiccpsx*sfgr*xqqxsiwsx
dprwxxxsxhcnxxgxnccnfsigxcl*i*i*xq*sfst*tfkxcqiriqxnxffsgcxq
xcxx*sxl*xgxrfr*txcxxl*s*xng


Frame C:
---XPLAQXXRVEXGXTXDGGPLYXKDPTWXEGLXXAAKFVAXAXKALVDXANXTAFGQX
IPGGTXXAXIATXXAXTAATFQLVXACKFKFXINSPFQHKLSXAAKSXSXATXFLVXAXK
XVXXKVAFEXXIDFDKLXVXGYKVKXME

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHP636 (CHP636Q) /CSM/CH/CHP6-B/CHP636Q.Seq.d/                        597   e-170
VHQ296 (VHQ296Q) /CSM/VH/VHQ2-D/VHQ296Q.Seq.d/                        525   e-148
SSE734 (SSE734Q) /CSM/SS/SSE7-B/SSE734Q.Seq.d/                        525   e-148
SLB750 (SLB750Q) /CSM/SL/SLB7-C/SLB750Q.Seq.d/                        525   e-148
SHL758 (SHL758Q) /CSM/SH/SHL7-C/SHL758Q.Seq.d/                        525   e-148
SHL705 (SHL705Q) /CSM/SH/SHL7-A/SHL705Q.Seq.d/                        525   e-148
SHL395 (SHL395Q) /CSM/SH/SHL3-D/SHL395Q.Seq.d/                        525   e-148
SHK808 (SHK808Q) /CSM/SH/SHK8-A/SHK808Q.Seq.d/                        525   e-148
SHK636 (SHK636Q) /CSM/SH/SHK6-B/SHK636Q.Seq.d/                        525   e-148
SHK510 (SHK510Q) /CSM/SH/SHK5-A/SHK510Q.Seq.d/                        525   e-148

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

CX401514|CX401514.2 JGI_XZT49257.fwd NIH_XGC_tropTad5 Xenopus tropicalis cDNA clone IMAGE:7624229 5', mRNA sequence.    34   0.83   2
AC158172|AC158172.10 Medicago truncatula clone mth2-143b6, WORKING DRAFT SEQUENCE, 7 ordered pieces.    42   9.2    1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54K81) RecName: Full=Talin-B;                                        54   2e-06
AB023655_1(AB023655|pid:none) Dictyostelium discoideum talB mRNA...    54   2e-06
AE017345_306(AE017345|pid:none) Cryptococcus neoformans var. neo...    45   0.001
D89267_1(D89267|pid:none) Schizosaccharomyces pombe mRNA, partia...    44   0.002
(Q9P6L5) RecName: Full=Endocytosis protein end4; AltName: Full=S...    44   0.002
(P54633) RecName: Full=Talin-A; AltName: Full=Filopodin;               41   0.014
A57036(A57036)talin - slime mold (Dictyostelium discoideum)            41   0.014
BC065101_1(BC065101|pid:none) Mus musculus huntingtin interactin...    40   0.032
(Q9JKY5) RecName: Full=Huntingtin-interacting protein 1-related ...    37   0.16
BC169096_1(BC169096|pid:none) Rattus norvegicus huntingtin inter...    37   0.16

 psg: 0.70  gvh: 0.45  alm: 0.44  top: 0.53  tms: 0.00  mit: 0.21  mip: 0.03
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: cytoplasmic
	 36.0 %: nuclear
	  8.0 %: mitochondrial
	  4.0 %: peroxisomal

>> prediction for CHP636 is cyt

>CHP636Z.Seq
NNNNNNNNNNGCCNCCCCTTTAGCNCAAANANAACGTGTCGAAAANGGTANAACAANTGA
TGGTGGTCCCCTNTATANAAAGGATCCNACTTGGGNTGAAGGTTTAATNTNTGCTGCAAA
ATTTGTTGCCCNAGCCNCTAAAGCTTTGGTAGATAANGCCAACAANACAGCATTTGGTCA
ANAGATCCCAGGTGGNACANAANAAGCTNTCATTGCAACTTNGANGGCTGNAACTGCTGC
AACTTTTCAATTGGTNTNTGCTTGTAAATTTAAATTTGANATCAATAGTCCTTTTCAACA
TAAACTTTCAAANGCTGCCAAATCCGNATCCAANGCAACCNATTTTTTAGTGGNTGCANC
CAAANCTGTCNCTGNTAAAGTNGCCTTTGAANAGGANATCGATTTCGATAAACTCNCTGT
CNCNGGTTATAAAGTTAAANAAATGGAA