>CHP418 (CHP418Q) /CSM/CH/CHP4-A/CHP418Q.Seq.d/
CTGTTGGCCTACTGGNACACACACATATACATCAAATAAACTATATAGGTTTAAACTTTT
TATTTATTTGTATAATAATAAAATCATAATAATCATAATAATAATTAATATAATATATCA
ATAATGACAGAGTTTGAAGCAATTGTCCATAAAGCTACAAACTCTAAAATTACAGCGCCA
AAAAGAAAACATGTCAGATCAATTGTTTTAGAATGTTATAATGAAAATAGTGCAAGAACA
TTTTATATGGAATTATATAGAAGACCATTAGATACTAGTGATGTTGTTTGTTGGAAATCA
TTGATTACAATTCATAAGGTTGTACAAGAGGGACCAAAGAATGTATTAAGTGATACAATT
AGTAGAGTTGGATGGTTTGAGAATTTGAGAGATCATTGGGCACGTTTTGATAATAGAGGA
TTTGGTAGATTGGTAGCAGACTATTGTACATTAATCATTGATAAAATACGTTTTCATCAA
GCACATCCAGAATTTGATGGTGGATTATCCTTGGAGAACTATAGCAAGAATCATAGACCC
GAGTCAATTGAAGTTGACAAAGGTTTACAAACTGTAAATCGTTTAATGGATTTAACTGAT
GCTGTCTTTAGAATGCATAATTCAATCGTATCAGCAACACCTTATAATGATTGTAAAACT
TCTGCTTTCATTCXXXXXXXXXXTGGATGCATTGGCTCAACAAGCTGACGCTGAAAGAAT
TGAAGCCGAGAAGAAATATTTAGAGAATGGTTTTGATTTGGATGATGTTGCTGAACGTGA
ACTATTGGCTGCCGCTAAAACCATTGAAGATGCTGCAAACTCATTATTGGCCGCAAAATC
AAAGAGAGCTCCAAAGAAGGAGGGTGATTCACCAGATGTTGCTGAGGCAATCCTTGAGGC
TGCTATGGCAATCACTGGTGCTACTTCCACATTGGTTGGTGCCGCCACTTTAGCACAAAG
AGAACGTGTCGAAAAGGGTAGAACAAGTGATGGTGGTCCACTCTATAGAAAGGATCCAAC
TTGGGCTGAAGGTTTAATCTCTGCTGCAAAATCTGTTGCCCAAGCCACTAAAGCTTTGGT
AGATAATGCCAACAAGACAGCATCTGGTCAAGAGATCCCAGGTGGTACAGAAGAAGCTCT
CATTGCAACTTCGATGGCTGTAACTGCTGCAACTTCTCAATTGGTCTCTGCTTGTAAATC
TAAATCTGATATCAATAGTCCTTCTCAACATAAACTTTCAAATGCTGCCAAATCCGTATC
CAATGCAACCAATCTTTTAGTGGCTGCAGCCAAAGCTGTCGCTGCTAAAGTCGCCTCTGA
AGAGGATATCGATTTCGATAAACTCACTGTCACTGGTTATAAAGTTAAAGAAATGGAGCA
ACAAATGGCAATTNCTCAGATTAGAAAAAGAATTAGAAGTCGNTAGAAAAGGTTAAGTGT
T

llaywxthiyik*ti*v*tfylfv***nhnnhnnn*YNISIMTEFEAIVHKATNSKITAP
KRKHVRSIVLECYNENSARTFYMELYRRPLDTSDVVCWKSLITIHKVVQEGPKNVLSDTI
SRVGWFENLRDHWARFDNRGFGRLVADYCTLIIDKIRFHQAHPEFDGGLSLENYSKNHRP
ESIEVDKGLQTVNRLMDLTDAVFRMHNSIVSATPYNDCKTSAFI---

---DALAQQADAERIEAEKKYLENGFDLDDVAERELLAAAKTIEDAANSLLAAKSKRAPK
KEGDSPDVAEAILEAAMAITGATSTLVGAATLAQRERVEKGRTSDGGPLYRKDPTWAEGL
ISAAKSVAQATKALVDNANKTASGQEIPGGTEEALIATSMAVTAATSQLVSACKSKSDIN
SPSQHKLSNAAKSVSNATNLLVAAAKAVAAKVASEEDIDFDKLTVTGYKVKEMEQQMAIX
QIRKRIRSR*krlsv

Frame A:
llaywxthiyik*ti*v*tfylfv***nhnnhnnn*YNISIMTEFEAIVHKATNSKITAP
KRKHVRSIVLECYNENSARTFYMELYRRPLDTSDVVCWKSLITIHKVVQEGPKNVLSDTI
SRVGWFENLRDHWARFDNRGFGRLVADYCTLIIDKIRFHQAHPEFDGGLSLENYSKNHRP
ESIEVDKGLQTVNRLMDLTDAVFRMHNSIVSATPYNDCKTSAFI---

---wmhwlnkltlkelkprrni*rmvliwmmllnvnywlplkplkmlqthywpqnqrelq
rrrvihqmllrqslrllwqslvllphwlvppl*hkenvskrveqvmvvhsieriqlglkv
*sllqnllpkplklw*imptrqhlvkrsqvvqkklslqlrwl*llqllnwsllvnlnlis
ivllninfqmlpnpypmqpif*wlqpklsllksplkrisisinslslviklkkwsnkwqx
lrlekelevxrkg*v

Frame B:
cwptgthtytsnklyrfklfiylynnkiiiiiiiiniiyq**qslkqlsiklqtlklqrq
kenmsdqlf*nvimkivqehfiwnyiedh*ilvmlfvgnh*lqfirlykrdqrmy*viql
veldglri*eiighvliiedlvdw*qtivh*slikyvfikhiqnlmvdypwrtiariidp
sqlkltkvykl*iv*wi*lmlsleciiqsyqqhlimivklllsf---

---gcigsts*r*kn*sreeifrewf*fg*cc*t*tigcr*nh*rcckliigrkikessk
egg*ftrcc*gnp*gcygnhwcyfhigwcrhfstkrtcrkg*nk*wwstl*kgsnlg*rf
nlcckiccpsh*sfgr*cqqdsiwsrdprwyrrsshcnfdgcnccnfsiglcl*i*i*yq
*sfst*tfkccqiriqcnqsfsgcsqscrc*srl*rgyrfr*thchwl*s*rngatngnx
sd*kkn*ksxekvkc

Frame C:
vgllxhthihqinyiglnflficiiiks**s***li*yinndrv*sncp*sykl*nysak
kktcqincfrml**k*cknilygii*ktiry**cclleiidyns*gctrgtkecik*yn*
*swmv*eferslgtf***riw*igsrllyinh**ntfssstsri*wwiilgel*qes*tr
vn*s*qrftncksfngfn*ccl*na*fnrisntl**l*nfcfh---

---DALAQQADAERIEAEKKYLENGFDLDDVAERELLAAAKTIEDAANSLLAAKSKRAPK
KEGDSPDVAEAILEAAMAITGATSTLVGAATLAQRERVEKGRTSDGGPLYRKDPTWAEGL
ISAAKSVAQATKALVDNANKTASGQEIPGGTEEALIATSMAVTAATSQLVSACKSKSDIN
SPSQHKLSNAAKSVSNATNLLVAAAKAVAAKVASEEDIDFDKLTVTGYKVKEMEQQMAIX
QIRKRIRSR*krlsv

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHP418 (CHP418Q) /CSM/CH/CHP4-A/CHP418Q.Seq.d/                       2537   0.0
SHL395 (SHL395Q) /CSM/SH/SHL3-D/SHL395Q.Seq.d/                       1459   0.0
SHK510 (SHK510Q) /CSM/SH/SHK5-A/SHK510Q.Seq.d/                       1459   0.0
SHB394 (SHB394Q) /CSM/SH/SHB3-D/SHB394Q.Seq.d/                       1459   0.0
SHA557 (SHA557Q) /CSM/SH/SHA5-C/SHA557Q.Seq.d/                       1459   0.0
SHA409 (SHA409Q) /CSM/SH/SHA4-A/SHA409Q.Seq.d/                       1459   0.0
CHS178 (CHS178Q) /CSM/CH/CHS1-D/CHS178Q.Seq.d/                       1459   0.0
CHR474 (CHR474Q) /CSM/CH/CHR4-D/CHR474Q.Seq.d/                       1459   0.0
CHR147 (CHR147Q) /CSM/CH/CHR1-B/CHR147Q.Seq.d/                       1459   0.0
CHN144 (CHN144Q) /CSM/CH/CHN1-B/CHN144Q.Seq.d/                       1459   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

BA000026|BA000026.2 Mycoplasma penetrans HF-2 DNA, complete genome.    32   0.013  27
CJ482405|CJ482405.1 Macaca fascicularis mRNA, clone: QtrA-18375, 5' end, expressed in brain temporal lobe.    50   0.13   1
AF083031|AF083031.2 Guillardia theta nucleomorph chromosome 3, complete sequence.    30   0.15   13
AC116979|AC116979.3 Dictyostelium discoideum chromosome 2 map 6445720-6776760 strain AX4, complete sequence.    34   0.19   16
AC134441|AC134441.4 Mus musculus BAC clone RP24-544J6 from chromosome 5, complete sequence.    40   0.23   9
AC158464|AC158464.2 Medicago truncatula chromosome 2 BAC clone mth2-145m24, complete sequence.    32   0.26   9
AY379774|AY379774.1 Medicago truncatula chromosome 5 clone MtH1-015B03 strain Jemalong A17, WORKING DRAFT SEQUENCE, 27 unordered pieces.    38   0.30   8
AC022441|AC022441.5 Homo sapiens chromosome 5 clone RP11-317O24, complete sequence.    38   0.46   10
BX572079|BX572079.7 Zebrafish DNA sequence from clone DKEY-35L8 in linkage group 15.    48   0.49   1
AC096351|AC096351.7 Rattus norvegicus clone CH230-24M6, WORKING DRAFT SEQUENCE, 3 unordered pieces.    40   0.86   5

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54K81) RecName: Full=Talin-B;                                       152   4e-35
AB023655_1(AB023655|pid:none) Dictyostelium discoideum talB mRNA...   152   4e-35
(P54633) RecName: Full=Talin-A; AltName: Full=Filopodin;              134   8e-30
A57036(A57036)talin - slime mold (Dictyostelium discoideum)           134   8e-30
EF107688_1(EF107688|pid:none) Emericella nidulans SlaB (slaB) ge...   127   9e-28
AE017345_306(AE017345|pid:none) Cryptococcus neoformans var. neo...   127   9e-28
EF156414_1(EF156414|pid:none) Ascosphaera apis cytoskeleton asse...   126   2e-27
AM920435_781(AM920435|pid:none) Penicillium chrysogenum Wisconsi...   124   1e-26
AB430739_1(AB430739|pid:none) Aspergillus oryzae RIB40 Aoend4 ge...   123   2e-26
EF363034_3(EF363034|pid:none) Neosartorya fischeri apn1 (APN1) a...   121   5e-26

 psg: 0.75  gvh: 0.32  alm: 0.37  top: 0.53  tms: 0.00  mit: 0.20  mip: 0.00
 nuc: 0.11  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: nuclear
	 36.0 %: cytoplasmic
	  4.0 %: Golgi
	  4.0 %: mitochondrial
	  4.0 %: plasma membrane
	  4.0 %: vesicles of secretory system

>> prediction for CHP418 is nuc

>CHP418F.Seq
CTGTTGGCCTACTGGNACACACACATATACATCAAATAAACTATATAGGTTTAAACTTTT
TATTTATTTGTATAATAATAAAATCATAATAATCATAATAATAATTAATATAATATATCA
ATAATGACAGAGTTTGAAGCAATTGTCCATAAAGCTACAAACTCTAAAATTACAGCGCCA
AAAAGAAAACATGTCAGATCAATTGTTTTAGAATGTTATAATGAAAATAGTGCAAGAACA
TTTTATATGGAATTATATAGAAGACCATTAGATACTAGTGATGTTGTTTGTTGGAAATCA
TTGATTACAATTCATAAGGTTGTACAAGAGGGACCAAAGAATGTATTAAGTGATACAATT
AGTAGAGTTGGATGGTTTGAGAATTTGAGAGATCATTGGGCACGTTTTGATAATAGAGGA
TTTGGTAGATTGGTAGCAGACTATTGTACATTAATCATTGATAAAATACGTTTTCATCAA
GCACATCCAGAATTTGATGGTGGATTATCCTTGGAGAACTATAGCAAGAATCATAGACCC
GAGTCAATTGAAGTTGACAAAGGTTTACAAACTGTAAATCGTTTAATGGATTTAACTGAT
GCTGTCTTTAGAATGCATAATTCAATCGTATCAGCAACACCTTATAATGATTGTAAAACT
TCTGCTTTCATTCNNNNNNNNNN

>CHP418Z.Seq
NNNNNNNNNNTGGATGCATTGGCTCAACAAGCTGACGCTGAAAGAATTGAAGCCGAGAAG
AAATATTTAGAGAATGGTTTTGATTTGGATGATGTTGCTGAACGTGAACTATTGGCTGCC
GCTAAAACCATTGAAGATGCTGCAAACTCATTATTGGCCGCAAAATCAAAGAGAGCTCCA
AAGAAGGAGGGTGATTCACCAGATGTTGCTGAGGCAATCCTTGAGGCTGCTATGGCAATC
ACTGGTGCTACTTCCACATTGGTTGGTGCCGCCACTTTAGCACAAAGAGAACGTGTCGAA
AAGGGTAGAACAAGTGATGGTGGTCCACTCTATAGAAAGGATCCAACTTGGGCTGAAGGT
TTAATCTCTGCTGCAAAATCTGTTGCCCAAGCCACTAAAGCTTTGGTAGATAATGCCAAC
AAGACAGCATCTGGTCAAGAGATCCCAGGTGGTACAGAAGAAGCTCTCATTGCAACTTCG
ATGGCTGTAACTGCTGCAACTTCTCAATTGGTCTCTGCTTGTAAATCTAAATCTGATATC
AATAGTCCTTCTCAACATAAACTTTCAAATGCTGCCAAATCCGTATCCAATGCAACCAAT
CTTTTAGTGGCTGCAGCCAAAGCTGTCGCTGCTAAAGTCGCCTCTGAAGAGGATATCGAT
TTCGATAAACTCACTGTCACTGGTTATAAAGTTAAAGAAATGGAGCAACAAATGGCAATT
NCTCAGATTAGAAAAAGAATTAGAAGTCGNTAGAAAAGGTTAAGTGTT

>CHP418P.Seq
CTGTTGGCCTACTGGNACACACACATATACATCAAATAAACTATATAGGTTTAAACTTTT
TATTTATTTGTATAATAATAAAATCATAATAATCATAATAATAATTAATATAATATATCA
ATAATGACAGAGTTTGAAGCAATTGTCCATAAAGCTACAAACTCTAAAATTACAGCGCCA
AAAAGAAAACATGTCAGATCAATTGTTTTAGAATGTTATAATGAAAATAGTGCAAGAACA
TTTTATATGGAATTATATAGAAGACCATTAGATACTAGTGATGTTGTTTGTTGGAAATCA
TTGATTACAATTCATAAGGTTGTACAAGAGGGACCAAAGAATGTATTAAGTGATACAATT
AGTAGAGTTGGATGGTTTGAGAATTTGAGAGATCATTGGGCACGTTTTGATAATAGAGGA
TTTGGTAGATTGGTAGCAGACTATTGTACATTAATCATTGATAAAATACGTTTTCATCAA
GCACATCCAGAATTTGATGGTGGATTATCCTTGGAGAACTATAGCAAGAATCATAGACCC
GAGTCAATTGAAGTTGACAAAGGTTTACAAACTGTAAATCGTTTAATGGATTTAACTGAT
GCTGTCTTTAGAATGCATAATTCAATCGTATCAGCAACACCTTATAATGATTGTAAAACT
TCTGCTTTCATTC----------TGGATGCATTGGCTCAACAAGCTGACGCTGAAAGAAT
TGAAGCCGAGAAGAAATATTTAGAGAATGGTTTTGATTTGGATGATGTTGCTGAACGTGA
ACTATTGGCTGCCGCTAAAACCATTGAAGATGCTGCAAACTCATTATTGGCCGCAAAATC
AAAGAGAGCTCCAAAGAAGGAGGGTGATTCACCAGATGTTGCTGAGGCAATCCTTGAGGC
TGCTATGGCAATCACTGGTGCTACTTCCACATTGGTTGGTGCCGCCACTTTAGCACAAAG
AGAACGTGTCGAAAAGGGTAGAACAAGTGATGGTGGTCCACTCTATAGAAAGGATCCAAC
TTGGGCTGAAGGTTTAATCTCTGCTGCAAAATCTGTTGCCCAAGCCACTAAAGCTTTGGT
AGATAATGCCAACAAGACAGCATCTGGTCAAGAGATCCCAGGTGGTACAGAAGAAGCTCT
CATTGCAACTTCGATGGCTGTAACTGCTGCAACTTCTCAATTGGTCTCTGCTTGTAAATC
TAAATCTGATATCAATAGTCCTTCTCAACATAAACTTTCAAATGCTGCCAAATCCGTATC
CAATGCAACCAATCTTTTAGTGGCTGCAGCCAAAGCTGTCGCTGCTAAAGTCGCCTCTGA
AGAGGATATCGATTTCGATAAACTCACTGTCACTGGTTATAAAGTTAAAGAAATGGAGCA
ACAAATGGCAATTNCTCAGATTAGAAAAAGAATTAGAAGTCGNTAGAAAAGGTTAAGTGT
T