>CHP195 (CHP195Q) /CSM/CH/CHP1-D/CHP195Q.Seq.d/
ACTGTTGGCCTACTGGTTTTTTCAAATACTTAAGGTATCAACAAATAAATAATAAATTAA
AAATTATTATGTAAATAGAGTTTATGAAATAATAATTATAATAAATATATGTACATATAA
AAAAAAAAXXXXXXXXXX

llaywffqilkvstnk**IKNYYVNRVYEIIIIINICTYKKK---

Frame A:
tvgllvfsnt*gink*iin*kllck*sl*nnnynkymyi*kk---


Frame B:
llaywffqilkvstnk**IKNYYVNRVYEIIIIINICTYKKK---


Frame C:
cwptgffkylryqqinnklkiim*iefmk**l**iyvhikk---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHP195 (CHP195Q) /CSM/CH/CHP1-D/CHP195Q.Seq.d/                         84   6e-16
SFB813 (SFB813Q) /CSM/SF/SFB8-A/SFB813Q.Seq.d/                         48   3e-05
CHD741 (CHD741Q) /CSM/CH/CHD7-B/CHD741Q.Seq.d/                         48   3e-05
CHB219 (CHB219Q) /CSM/CH/CHB2-A/CHB219Q.Seq.d/                         46   1e-04
VFN207 (VFN207Q) /CSM/VF/VFN2-A/VFN207Q.Seq.d/                         44   5e-04
VFI803 (VFI803Q) /CSM/VF/VFI8-A/VFI803Q.Seq.d/                         44   5e-04
SHK355 (SHK355Q) /CSM/SH/SHK3-C/SHK355Q.Seq.d/                         44   5e-04
SHI251 (SHI251Q) /CSM/SH/SHI2-C/SHI251Q.Seq.d/                         44   5e-04
SHB887 (SHB887Q) /CSM/SH/SHB8-D/SHB887Q.Seq.d/                         44   5e-04
SFD460 (SFD460Q) /CSM/SF/SFD4-C/SFD460Q.Seq.d/                         44   5e-04

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence.    44   8e-04  4
CJ465703|CJ465703.1 Macaca fascicularis mRNA, clone: QnpA-14832, 5' end, expressed in brain parietal lobe.    50   0.010  1
CJ476768|CJ476768.1 Macaca fascicularis mRNA, clone: QtrA-11242, 5' end, expressed in brain temporal lobe.    48   0.040  1
CJ448572|CJ448572.1 Macaca fascicularis mRNA, clone: QflA-13951, 5' end, expressed in brain frontal lobe.    48   0.040  1
CJ446744|CJ446744.1 Macaca fascicularis mRNA, clone: QflA-12046, 5' end, expressed in brain frontal lobe.    48   0.040  1
CJ482854|CJ482854.1 Macaca fascicularis mRNA, clone: QtsA-10257, 5' end, expressed in testis.    48   0.040  1
CJ477159|CJ477159.1 Macaca fascicularis mRNA, clone: QtrA-11943, 5' end, expressed in brain temporal lobe.    48   0.040  1
CJ477096|CJ477096.1 Macaca fascicularis mRNA, clone: QtrA-11875, 5' end, expressed in brain temporal lobe.    48   0.040  1
CJ476362|CJ476362.1 Macaca fascicularis mRNA, clone: QtrA-10549, 5' end, expressed in brain temporal lobe.    48   0.040  1
CJ463126|CJ463126.1 Macaca fascicularis mRNA, clone: QnpA-11207, 5' end, expressed in brain parietal lobe.    48   0.040  1

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3039690
Number of Hits to DB: 109,645,070

 psg: 0.92  gvh: 0.18  alm: 0.43  top: 0.47  tms: 0.00  mit: 0.37  mip: 0.00
 nuc: 0.12  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 60.0 %: nuclear
	 24.0 %: cytoplasmic
	  8.0 %: vacuolar
	  8.0 %: mitochondrial

>> prediction for CHP195 is nuc

>CHP195F.Seq
ACTGTTGGCCTACTGGTTTTTTCAAATACTTAAGGTATCAACAAATAAATAATAAATTAA
AAATTATTATGTAAATAGAGTTTATGAAATAATAATTATAATAAATATATGTACATATAA
AAAAAAAANNNNNNNNNN