>CHP160 (CHP160Q) /CSM/CH/CHP1-C/CHP160Q.Seq.d/
CTGTTGGCCTACTGGNATATTTATTAAATAATTATAATCAATACAAATAAAATGAAAAAA
ATAAACAATAATAAAATTTTTGTTTTATTTTTGACAATATTATTATATTTATTAAATATT
ACAACTGCGCAAAAGCCAGTGTCAATAAATATAAAGATATTTGATCAATTACCTTTATAT
AATGATAATTTTGGTTCACAATCAAGAGCAGCAACCATTAAGAGTATGGTTGCAACATCA
TTAAATACAACATTTAAAACTCCAAGTTTAGGATCAGCCACCTCAAGCTTACCATCACCA
CAATTATTCCGATATTGGTTTCAATCAAATTTTGCCAATGAAACAAAAAACTCTGGTTTA
AATGCCCCATTAACAAGAACAATTACCTTAAACTATGATTCTGACAGTGGTAATTATATT
TTCAACAATCCAAATTTCTTTTTAATTGATACAGATGGAXXXXXXXXXXAAATGTGTAGC
TCAAGATTCTCATTGTGATGATGGTAATCCCATGTACTGATAATGCTTGTGTCGCTTCAG
CTAATAGTACCGCCAATAGCCAAGTTGGTCAATGCACTCAAACTCCAACTGCTAAATGTG
ATTTGGGTGATAAATGTATGGTTTACAGTTGTACCTTGGAAGGTGGTTGTAATGCAACTC
AACGTGTTTGTCCAAACTCTGGTGCTTGTAAAATTGGTTATTGTGAACCTGGTTTCGGTT
GTAAATTAAAGGATAGAGTTTGTTCTTCCGATTGGTATTGTATTGAAGCTCAATGTGATG
CAAAATATGGTTGCATTCAATTCGATAGAAGATGTGCTCCTGATAATAGTAAATGTCAAG
AAGGTGTCTGTGTAAACAATACTGCTATCGGTAAAAATGATGGAAAATGTATTTCTGAAG
ATTATGATCCAAAACCATTTGTTTGTCAAAAAGCTGCTTTAGTTTCAACTGCTGTTATTG
CAAGTGTTGTTGTAGTTGGTGCTGTTGTTTTAGGTGCTGCTATATTTGCGGGTAAGAAAG
GTTATGATGCTTGGAAAACAAGTCAAGGAAATGTTATGGCAGCTTCACAAGCTAATCCAT
TATATACTCAATCAAGTAATGGAGGTGAAAATCCACTCTATAACTCACCAACATAAATCC
AAAAACCTAATTTATAAAATCATGTATTGTTTTAATTTTAATTTTTT

llaywxiy*IIIINTNKMKKINNNKIFVLFLTILLYLLNITTAQKPVSINIKIFDQLPLY
NDNFGSQSRAATIKSMVATSLNTTFKTPSLGSATSSLPSPQLFRYWFQSNFANETKNSGL
NAPLTRTITLNYDSDSGNYIFNNPNFFLIDTDG---

---KCVAQDSHCDDGNPMY**clcrfs**yrq*pswsmhsnsnc*m*fg**myglqlylg
rwl*cnstclsklwcl*nwll*twfrl*ikg*slffrlvly*ssm*ckiwlhsir*kmcs
****msrrclckqycyr*k*wkmyf*rl*skticlskscfsfnccyckcccswcccfrcc
yicg*erl*clenksrkcygsfts*siiysik*wr*kstl*ltninpkt*fikscivlil
if

Frame A:
llaywxiy*IIIINTNKMKKINNNKIFVLFLTILLYLLNITTAQKPVSINIKIFDQLPLY
NDNFGSQSRAATIKSMVATSLNTTFKTPSLGSATSSLPSPQLFRYWFQSNFANETKNSGL
NAPLTRTITLNYDSDSGNYIFNNPNFFLIDTDG---

---KCVAQDSHCDDGNPMY**clcrfs**yrq*pswsmhsnsnc*m*fg**myglqlylg
rwl*cnstclsklwcl*nwll*twfrl*ikg*slffrlvly*ssm*ckiwlhsir*kmcs
****msrrclckqycyr*k*wkmyf*rl*skticlskscfsfnccyckcccswcccfrcc
yicg*erl*clenksrkcygsfts*siiysik*wr*kstl*ltninpkt*fikscivlil
if

Frame B:
cwptgifik*l*siqik*kk*tiikflfyf*qyyyiy*ilqlrksqcq*i*rylinylyi
miilvhnqeqqplrvwlqhh*iqhlklqv*dqppqayhhhnysdigfnqilpmkqktlv*
mph*qeqlp*tmiltvviifstiqisf*liqm---

---nv*lkilivmmvipctdnacvasanstansqvgqctqtptakcdlgdkcmvysctle
ggcnatqrvcpnsgackigycepgfgcklkdrvcssdwycieaqcdakygciqfdrrcap
dnskcqegvcvnntaigkndgkcisedydpkpfvcqkaalvstaviasvvvvgavvlgaa
ifagkkgydawktsqgnvmaasqanplytqssnggenplynspt*iqkpnl*nhvlf*f*
ff

Frame C:
vgllxyllnnynqyk*neknkq**nfcfifdniiifikyyncakasvnkykdi*sitfi*
**fwftikssnh*eygcniikyni*nskfrishlkltittiipilvsikfcq*nkklwfk
cpinknnylkl*f*qw*lyfqqskflfn*yrw---

---mcssrfsl**w*shvlimlvslqlivppiaklvnalklqllnviwvinvwftvvpwk
vvvmqlnvfvqtlvlvklvivnlvsvvn*riefvlpigivlklnvmqnmvafnsiedvll
iivnvkkvsv*tillsvkmmenvflkimiqnhlfvkkll*fqllllqvll*lvllf*vll
ylrvrkvmmlgkqvkemlwqlhklihyilnqvmevkihsithqhksknliykimycfnfn
f

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHP160 (CHP160Q) /CSM/CH/CHP1-C/CHP160Q.Seq.d/                       2018   0.0
SFE223 (SFE223Q) /CSM/SF/SFE2-A/SFE223Q.Seq.d/                       1388   0.0
CHP822 (CHP822Q) /CSM/CH/CHP8-A/CHP822Q.Seq.d/                       1388   0.0
CFJ155 (CFJ155Q) /CSM/CF/CFJ1-C/CFJ155Q.Seq.d/                       1388   0.0
AHA608 (AHA608Q) /CSM/AH/AHA6-A/AHA608Q.Seq.d/                       1388   0.0
AHA317 (AHA317Q) /CSM/AH/AHA3-A/AHA317Q.Seq.d/                       1388   0.0
SHL876 (SHL876Q) /CSM/SH/SHL8-D/SHL876Q.Seq.d/                       1372   0.0
SHG135 (SHG135Q) /CSM/SH/SHG1-B/SHG135Q.Seq.d/                       1372   0.0
SHF677 (SHF677Q) /CSM/SH/SHF6-D/SHF677Q.Seq.d/                       1372   0.0
SFI733 (SFI733Q) /CSM/SF/SFI7-B/SFI733Q.Seq.d/                       1372   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC115684|AC115684.2 Dictyostelium discoideum chromosome 2 map 3108975-3191114 strain AX4, complete sequence.    38   6e-07  9
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence.    66   2e-06  1
AJ548837|AJ548837.1 Dictyostelium discoideum mRNA for extracellular signalling molecule  DicA (dicA gene).    60   1e-04  2
AJ548838|AJ548838.1 Dictyostelium discoideum dicA gene for extracellular signalling  molecule DicA, exons 1-2.    60   1e-04  1
AY653733|AY653733.1 Acanthamoeba polyphaga mimivirus, complete genome.    34   0.012  22
AC117070|AC117070.2 Dictyostelium discoideum chromosome 2 map 2097701-2233941 strain AX4, complete sequence.    36   0.021  11
AC103562|AC103562.6 Homo sapiens BAC clone RP11-608O21 from 4, complete sequence.    34   0.050  10
AR550782|AR550782.1 Sequence 5913 from patent US 6747137.          38   0.055  2
BH701655|BH701655.1 BOMCM56TR BO_2_3_KB Brassica oleracea genomic clone BOMCM56, DNA sequence.    48   0.090  2
AC153003|AC153003.14 Medicago truncatula clone mth2-96o5, complete sequence.    32   0.091  9

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54P69) RecName: Full=Protein psiM; Flags: Precursor;                393   e-112
(Q86HT1) RecName: Full=Protein psiL; Flags: Precursor;  &AC11695...   174   5e-42
(Q557E9) RecName: Full=Protein psiG; Flags: Precursor;  &AC11568...   162   2e-39
(Q94494) RecName: Full=Protein psiH; Flags: Precursor;  &U67940_...   160   1e-37
(Q54VS2) RecName: Full=Protein psiP; Flags: Precursor;                150   6e-35
(Q54G85) RecName: Full=Protein psiJ; Flags: Precursor;                123   1e-26
(Q54CH8) RecName: Full=Protein psiN; Flags: Precursor;                118   4e-25
(Q55FQ4) RecName: Full=Protein psiB; Flags: Precursor;                 71   8e-11
(Q968Z6) RecName: Full=Protein psiA; AltName: Full=Prespore-cell...    70   2e-10
(Q55FQ5) RecName: Full=Protein psiS; Flags: Precursor;                 62   3e-08

 psg: 0.64  gvh: 0.70  alm: 0.24  top: 0.33  tms: 0.07  mit: 0.32  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 1.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 20.0 %: cytoplasmic
	 20.0 %: endoplasmic reticulum
	 16.0 %: Golgi
	 16.0 %: mitochondrial
	 16.0 %: nuclear
	  4.0 %: vacuolar
	  4.0 %: plasma membrane
	  4.0 %: peroxisomal

>> prediction for CHP160 is cyt

>CHP160F.Seq
CTGTTGGCCTACTGGNATATTTATTAAATAATTATAATCAATACAAATAAAATGAAAAAA
ATAAACAATAATAAAATTTTTGTTTTATTTTTGACAATATTATTATATTTATTAAATATT
ACAACTGCGCAAAAGCCAGTGTCAATAAATATAAAGATATTTGATCAATTACCTTTATAT
AATGATAATTTTGGTTCACAATCAAGAGCAGCAACCATTAAGAGTATGGTTGCAACATCA
TTAAATACAACATTTAAAACTCCAAGTTTAGGATCAGCCACCTCAAGCTTACCATCACCA
CAATTATTCCGATATTGGTTTCAATCAAATTTTGCCAATGAAACAAAAAACTCTGGTTTA
AATGCCCCATTAACAAGAACAATTACCTTAAACTATGATTCTGACAGTGGTAATTATATT
TTCAACAATCCAAATTTCTTTTTAATTGATACAGATGGANNNNNNNNNN

>CHP160Z.Seq
NNNNNNNNNNAAATGTGTAGCTCAAGATTCTCATTGTGATGATGGTAATCCCATGTACTG
ATAATGCTTGTGTCGCTTCAGCTAATAGTACCGCCAATAGCCAAGTTGGTCAATGCACTC
AAACTCCAACTGCTAAATGTGATTTGGGTGATAAATGTATGGTTTACAGTTGTACCTTGG
AAGGTGGTTGTAATGCAACTCAACGTGTTTGTCCAAACTCTGGTGCTTGTAAAATTGGTT
ATTGTGAACCTGGTTTCGGTTGTAAATTAAAGGATAGAGTTTGTTCTTCCGATTGGTATT
GTATTGAAGCTCAATGTGATGCAAAATATGGTTGCATTCAATTCGATAGAAGATGTGCTC
CTGATAATAGTAAATGTCAAGAAGGTGTCTGTGTAAACAATACTGCTATCGGTAAAAATG
ATGGAAAATGTATTTCTGAAGATTATGATCCAAAACCATTTGTTTGTCAAAAAGCTGCTT
TAGTTTCAACTGCTGTTATTGCAAGTGTTGTTGTAGTTGGTGCTGTTGTTTTAGGTGCTG
CTATATTTGCGGGTAAGAAAGGTTATGATGCTTGGAAAACAAGTCAAGGAAATGTTATGG
CAGCTTCACAAGCTAATCCATTATATACTCAATCAAGTAATGGAGGTGAAAATCCACTCT
ATAACTCACCAACATAAATCCAAAAACCTAATTTATAAAATCATGTATTGTTTTAATTTT
AATTTTTT

>CHP160P.Seq
CTGTTGGCCTACTGGNATATTTATTAAATAATTATAATCAATACAAATAAAATGAAAAAA
ATAAACAATAATAAAATTTTTGTTTTATTTTTGACAATATTATTATATTTATTAAATATT
ACAACTGCGCAAAAGCCAGTGTCAATAAATATAAAGATATTTGATCAATTACCTTTATAT
AATGATAATTTTGGTTCACAATCAAGAGCAGCAACCATTAAGAGTATGGTTGCAACATCA
TTAAATACAACATTTAAAACTCCAAGTTTAGGATCAGCCACCTCAAGCTTACCATCACCA
CAATTATTCCGATATTGGTTTCAATCAAATTTTGCCAATGAAACAAAAAACTCTGGTTTA
AATGCCCCATTAACAAGAACAATTACCTTAAACTATGATTCTGACAGTGGTAATTATATT
TTCAACAATCCAAATTTCTTTTTAATTGATACAGATGGA----------AAATGTGTAGC
TCAAGATTCTCATTGTGATGATGGTAATCCCATGTACTGATAATGCTTGTGTCGCTTCAG
CTAATAGTACCGCCAATAGCCAAGTTGGTCAATGCACTCAAACTCCAACTGCTAAATGTG
ATTTGGGTGATAAATGTATGGTTTACAGTTGTACCTTGGAAGGTGGTTGTAATGCAACTC
AACGTGTTTGTCCAAACTCTGGTGCTTGTAAAATTGGTTATTGTGAACCTGGTTTCGGTT
GTAAATTAAAGGATAGAGTTTGTTCTTCCGATTGGTATTGTATTGAAGCTCAATGTGATG
CAAAATATGGTTGCATTCAATTCGATAGAAGATGTGCTCCTGATAATAGTAAATGTCAAG
AAGGTGTCTGTGTAAACAATACTGCTATCGGTAAAAATGATGGAAAATGTATTTCTGAAG
ATTATGATCCAAAACCATTTGTTTGTCAAAAAGCTGCTTTAGTTTCAACTGCTGTTATTG
CAAGTGTTGTTGTAGTTGGTGCTGTTGTTTTAGGTGCTGCTATATTTGCGGGTAAGAAAG
GTTATGATGCTTGGAAAACAAGTCAAGGAAATGTTATGGCAGCTTCACAAGCTAATCCAT
TATATACTCAATCAAGTAATGGAGGTGAAAATCCACTCTATAACTCACCAACATAAATCC
AAAAACCTAATTTATAAAATCATGTATTGTTTTAATTTTAATTTTTT