>CHP143 (CHP143Q) /CSM/CH/CHP1-B/CHP143Q.Seq.d/
XXXXXXXXXXAAGAAAAGTATTTTTATTCTCAAAAAGCATTACCATTATTATAAAACTGG
TGCATACTTTATTTCAAGTATCATTTGTGATATTCCCGCTGGTTTAATTGAAGTCGCATT
CTTTGGTCCAATTGTTTATTGGCTAGCAAATCTTAGGCCAGTTTTCATTAGGTTTGTTTA
TNTTATGATTTTATTATTTATAACTGATAATTTATCATTATCATTTGCTAAAATGTGTGC
AGCAATTTCACCAACAATTGAAATTGCAAATGTAACAGCATCAGTAATACTTTCAATTTG
GTTATTATTTTCCAGGTTTCCACGGCACCAAAGAATGATATTGNAAGGTTGGTGGAATTT
GGTTATATTATATATCACCCTAATACATGNGATTTT

---KSIFILKKHYHYYKTGAYFISSIICDIPAGLIEVAFFGPIVYWLANLRPVFIRFVYX
MILLFITDNLSLSFAKMCAAISPTIEIANVTASVILSIWLLFSRFPRHQRMILXGWWNLV
ILYITLIHXI

Frame A:
---rkvflfsksitiiiklvhtlfqvsfvifplv*lkshslvqlfig*qilgqfslglfx
l*fyyl*liiyhyhllkcvqqfhqqlklqm*qhq*yfqfgyyfpgfhgtke*yxkvggiw
lyyisp*ymxf


Frame B:
---ekyfysqkalpll*nwcilyfkyhl*ysrwfn*srilwsncllasks*asfh*vclx
ydfiiyn**fiiiic*nvcsnftnn*nckcnsisntfnlviifqvstapkndixrlvefg
yiiyhpntxdf


Frame C:
---KSIFILKKHYHYYKTGAYFISSIICDIPAGLIEVAFFGPIVYWLANLRPVFIRFVYX
MILLFITDNLSLSFAKMCAAISPTIEIANVTASVILSIWLLFSRFPRHQRMILXGWWNLV
ILYITLIHXI

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHP143 (CHP143Q) /CSM/CH/CHP1-B/CHP143Q.Seq.d/                        747   0.0
CHM826 (CHM826Q) /CSM/CH/CHM8-B/CHM826Q.Seq.d/                        630   e-180
CHL414 (CHL414Q) /CSM/CH/CHL4-A/CHL414Q.Seq.d/                        630   e-180
CFI135 (CFI135Q) /CSM/CF/CFI1-B/CFI135Q.Seq.d/                        630   e-180
CHF458 (CHF458Q) /CSM/CH/CHF4-C/CHF458Q.Seq.d/                        611   e-174
CHS156 (CHS156Q) /CSM/CH/CHS1-C/CHS156Q.Seq.d/                        440   e-123
CHN242 (CHN242Q) /CSM/CH/CHN2-B/CHN242Q.Seq.d/                        440   e-123
SHA186 (SHA186Q) /CSM/SH/SHA1-D/SHA186Q.Seq.d/                        432   e-120
CHE717 (CHE717Q) /CSM/CH/CHE7-A/CHE717Q.Seq.d/                        432   e-120
AFG117 (AFG117Q) /CSM/AF/AFG1-A/AFG117Q.Seq.d/                        426   e-118

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AF482384|AF482384.1 Dictyostelium discoideum ABC transporter AbcG5 (abcG5) gene, complete cds.   307   e-159  6
AF482385|AF482385.1 Dictyostelium discoideum ABC transporter AbcG6 (abcG6) gene, partial cds.   202   e-110  6
CR382400|CR382400.1 Plasmodium falciparum chromosome 6, complete sequence; segment 3/5.    34   7e-06  11
AL844506|AL844506.1 Plasmodium falciparum chromosome  7.           42   1e-04  14
AE014849|AE014849.1 Plasmodium falciparum 3D7 chromosome 12 section 6 of 9 of the complete sequence.    36   3e-04  10
X95276|X95276.2 Plasmodium falciparum complete gene map of plastid-like DNA (IR-B).    32   0.001  6
CP000107|CP000107.1 Ehrlichia canis str. Jake, complete genome.    34   0.002  16
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence.    34   0.003  14
AL929355|AL929355.1 Plasmodium falciparum strain 3D7, chromosome 9; segment 1/5.    32   0.006  13
AL035477|AL035477.6 Plasmodium falciparum MAL4P4.                  34   0.007  9

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF482384_1(AF482384|pid:none) Dictyostelium discoideum ABC trans...   190   2e-48
(Q54TV2) RecName: Full=ABC transporter G family member 5; AltNam...   190   2e-48
(Q54TV1) RecName: Full=ABC transporter G family member 6; AltNam...   180   3e-45
AF482394_1(AF482394|pid:none) Dictyostelium discoideum ABC trans...    63   3e-09
AJ243112_1(AJ243112|pid:none) Mycosphaerella graminicola atr1 ge...    58   9e-08
AC006762_5(AC006762|pid:none) Caenorhabditis elegans cosmid Y42G...    55   1e-06
AM920427_990(AM920427|pid:none) Penicillium chrysogenum Wisconsi...    53   3e-06
AM270224_3(AM270224|pid:none) Aspergillus niger contig An11c0070...    53   4e-06
AC004680_16(AC004680|pid:none) Arabidopsis thaliana chromosome 2...    52   6e-06
AP005701_21(AP005701|pid:none) Oryza sativa Japonica Group genom...    52   6e-06

 psg: 0.60  gvh: 0.43  alm: 0.31  top: 0.47  tms: 0.27  mit: 0.32  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 1.00  m3b: 0.00  m_ : 0.00 

	 36.0 %: endoplasmic reticulum
	 24.0 %: plasma membrane
	 20.0 %: mitochondrial
	  8.0 %: nuclear
	  4.0 %: vesicles of secretory system
	  4.0 %: peroxisomal
	  4.0 %: Golgi

>> prediction for CHP143 is end

>CHP143Z.Seq
NNNNNNNNNNAAGAAAAGTATTTTTATTCTCAAAAAGCATTACCATTATTATAAAACTGG
TGCATACTTTATTTCAAGTATCATTTGTGATATTCCCGCTGGTTTAATTGAAGTCGCATT
CTTTGGTCCAATTGTTTATTGGCTAGCAAATCTTAGGCCAGTTTTCATTAGGTTTGTTTA
TNTTATGATTTTATTATTTATAACTGATAATTTATCATTATCATTTGCTAAAATGTGTGC
AGCAATTTCACCAACAATTGAAATTGCAAATGTAACAGCATCAGTAATACTTTCAATTTG
GTTATTATTTTCCAGGTTTCCACGGCACCAAAGAATGATATTGNAAGGTTGGTGGAATTT
GGTTATATTATATATCACCCTAATACATGNGATTTT