>CHO823 (CHO823Q) /CSM/CH/CHO8-A/CHO823Q.Seq.d/
ATTATTCAATTTTATTTTTAATCAATTCAAATTAAAAAAAAAAACAATAACTAACTAAGT
TAAAAATAAAAAAATAATAAAGGATGTTGTTTNTAAAAAATATTGGAGTATTTTTTATGA
TATTCCTTGTATCAAAATCCTATGCGACGGATTGTAATAAAATTACTAATGAANAAAAAT
GTCATAAATCTTCGGAATGTATTGTTATAAATTATACACCATGTTGNGGNGAACAAAAAT
GGGCTTGCTCTAAAGGTACATTTGATACTTGTNCATATGAAAATAGTTGTTATANAAATT
CATCCAATAACCAAGTTGTTGAAGTATCAAATAAATGCTTCAATCTTGATGGATTTATTA
AAATTACAACTCCAACCGAGTNTTCTTGTTCTGATGCCAANAXXXXXXXXXXCCATGATA
GATGTTCATTAAGATGTCCNCATGNCCNATGAATGTAAAGTTGATCCCCAATGGTAAAGA
ATGTTGNGTCAGATTCCCATAGACCACCACCCACCAGAAGTTTTGTTCATTAAGATGCCC
ACCAAAAACATGAATGTAAATTTGATGATCATGGTAAAAAATGTTGTGTAAAGATTCATT
GTGATGAAGTTTGTGATTTAGATTGTGGTAGAGGTTTTGAATGTAAAATTAGACATGATG
GTTCAAAATGTTGTGTCCGTTCAGAAAGACCACACCCACCACAACATGAAAAATGTAATA
AGAGATGCCCACCAGGCCATGAATGTAAAGTTGATCAACATGGAAAAGAATGTTGCGTTG
TTGCCCATAGACCACCACCAAAATGCTCTTTAAGATGTCCACCAAGACATGAATGTAGAG
TCAACCACTTTGGTGAAGAATGTTGTGTTAAAGTTCACCACGATAAATGTTCATTGAGAT
GTCCACCAGGCCATGAATGTAAAGTTGATCAACATGGAAAAGAATGTTGCGTTGTTGCCC
ATAGACCACCACCAAAATGNTCATTAAGATGTCCACCAAAACATGAATGTAGAATCAATC
ACTTTGGTGAAGAATGCTGTGTTAAAAGTAGAAATGATTGTTTAACTTGTGAAGACCTAA
ACTGTGAAAGAAAAGGTTTACATTGTGCCATGAAAACTGTACCAATNATAAAGAAAATTG
TT

ysilflinsn*kkkq*ltklkikk**RMLFXKNIGVFFMIFLVSKSYATDCNKITNEXKC
HKSSECIVINYTPCXGEQKWACSKGTFDTCXYENSCYXNSSNNQVVEVSNKCFNLDGFIK
ITTPTEXSCSDAX---

---HDRCSLRCPHXX*m*s*spmvknvxsdshrppptrsfvh*dahqkheckfddhgkkc
cvkihcdevcdldcgrgfeckirhdgskccvrserphppqhekcnkrcppgheckvdqhg
keccvvahrpppkcslrcpprhecrvnhfgeeccvkvhhdkcslrcppgheckvdqhgke
ccvvahrpppkxslrcppkhecrinhfgeeccvksrndcltcedlncerkglhcamktvp
xikkiv

Frame A:
iiqfyf*siqikkknnn*ls*k*knnkgccx*kileyfl*yslyqnpmrrivikllmxkn
vinlrnvll*iihhvxxnknglalkvhlilvhmkivvixihpitkllkyqinasilmdll
klqlqpsxlvlmpx---

---p**mfikmsxxpmnvklipngkecxvrfp*ttthqkfcslrcppkt*m*i**sw*km
lckdsl**sl*frlw*rf*m*n*t*wfkmlcpfrkttpttt*km**emptrp*m*s*stw
krmlrccp*tttkmlfkmstkt*m*sqplw*rmlc*sspr*mfiemstrp*m*s*stwkr
mlrccp*tttkmxikmstkt*m*nqslw*rmlc*k*k*lfnl*rpkl*kkrftlchenct
nxkenc

Frame B:
lfnfifnqfklkkktitn*vknkkiikdvvxkkywsifydipcikilcdgl**ny**xkm
s*ifgmycyklytmlxxtkmgll*ryi*ylxi*k*llxkfiq*psc*sik*mlqs*wiy*
nynsnrvflf*cq---

---HDRCSLRCPHXX*m*s*spmvknvxsdshrppptrsfvh*dahqkheckfddhgkkc
cvkihcdevcdldcgrgfeckirhdgskccvrserphppqhekcnkrcppgheckvdqhg
keccvvahrpppkcslrcpprhecrvnhfgeeccvkvhhdkcslrcppgheckvdqhgke
ccvvahrpppkxslrcppkhecrinhfgeeccvksrndcltcedlncerkglhcamktvp
xikkiv

Frame C:
ysilflinsn*kkkq*ltklkikk**RMLFXKNIGVFFMIFLVSKSYATDCNKITNEXKC
HKSSECIVINYTPCXGEQKWACSKGTFDTCXYENSCYXNSSNNQVVEVSNKCFNLDGFIK
ITTPTEXSCSDAX---

---midvh*dvxmxxeckvdpqw*rmlxqipidhhppevlfikmptknmnvnlmimvknv
v*rfivmkfvi*ivvevlnvkldmmvqnvvsvqkdhthhnmknvirdahqamnvklinme
knvallpidhhqnal*dvhqdmnvesttlvknvvlkfttinvh*dvhqamnvklinmekn
vallpidhhqnxh*dvhqnmnvesitlvknavlkvemiv*lvkt*tvkekvyivp*klyq
x*rkl

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHO823 (CHO823Q) /CSM/CH/CHO8-A/CHO823Q.Seq.d/                       1974   0.0
CHF652 (CHF652Q) /CSM/CH/CHF6-C/CHF652Q.Seq.d/                       1334   0.0
CHG357 (CHG357Q) /CSM/CH/CHG3-C/CHG357Q.Seq.d/                       1328   0.0
CHE842 (CHE842Q) /CSM/CH/CHE8-B/CHE842Q.Seq.d/                       1328   0.0
SHE749 (SHE749Q) /CSM/SH/SHE7-C/SHE749Q.Seq.d/                       1326   0.0
CHF402 (CHF402Q) /CSM/CH/CHF4-A/CHF402Q.Seq.d/                       1326   0.0
SFB458 (SFB458Q) /CSM/SF/SFB4-C/SFB458Q.Seq.d/                       1324   0.0
CHQ876 (CHQ876Q) /CSM/CH/CHQ8-D/CHQ876Q.Seq.d/                       1324   0.0
CHG714 (CHG714Q) /CSM/CH/CHG7-A/CHG714Q.Seq.d/                       1324   0.0
AHB393 (AHB393Q) /CSM/AH/AHB3-D/AHB393Q.Seq.d/                       1324   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

U25144|U25144.1 Dictyostelium discoideum spore coat protein SP87 (PspD) gene, complete cds.  1148   0.0    9
AC117267|AC117267.2 Dictyostelium discoideum chromosome 2 map 5836255-5862024 strain AX4, complete sequence.  1148   0.0    10
M26239|M26239.1 D.discoideum spore coat protein SP60 gene, complete cds.    66   1e-12  4
X51892|X51892.1 Dictyostelium discoideum SP60 gene for spore coat protein.    66   3e-12  4
AC116977|AC116977.2 Dictyostelium discoideum chromosome 2 map 5515173-5817331 strain AX4, complete sequence.    66   3e-09  12
AC150841|AC150841.6 Medicago truncatula clone mth2-59m24, WORKING DRAFT SEQUENCE, 8 unordered pieces.    42   0.006  2
AP007723|AP007723.1 Lotus corniculatus var. japonicus genomic DNA, chromosome 3, clone:LjT42M03, TM0984.    38   0.013  8
AC124167|AC124167.2 Tetraodon nigroviridis clone GSTNB-42J2, WORKING DRAFT SEQUENCE, 14 unordered pieces.    38   0.072  4
AC146784|AC146784.26 Medicago truncatula clone mth2-172c4, WORKING DRAFT SEQUENCE, 2 ordered pieces.    34   0.084  7
AC141955|AC141955.2 Rattus norvegicus clone CH230-418P10, WORKING DRAFT SEQUENCE, 29 unordered pieces.    48   0.087  4

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC117267_7(AC117267|pid:none) Dictyostelium discoideum chromosom...   477   e-133
(P15270) RecName: Full=Spore coat protein SP60; Flags: Precursor...   172   2e-41
X52105_1(X52105|pid:none) Dictyostelium discoideum SP60 gene for...   110   7e-23
(Q54QX2) RecName: Full=Probable spore coat protein DDB_G0283555;...    80   2e-13
D13973_1(D13973|pid:none) Dictyostelium discoideum gene for Dp87...    70   1e-10
(Q04503) RecName: Full=Prespore protein Dp87; Flags: Precursor;        69   2e-10
S07638(S07638;A60942;B60942) spore coat protein SP96 precursor -...    67   1e-09
(P14328) RecName: Full=Spore coat protein SP96;  &AC117075_49(AC...    67   1e-09
(P54704) RecName: Full=Spore coat protein SP85; AltName: Full=Ce...    60   1e-07
(P15269) RecName: Full=Spore coat protein SP70; AltName: Full=Pr...    60   1e-07

 psg: 1.02  gvh: 0.68  alm: 0.51  top: 0.40  tms: 0.00  mit: 0.38  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 60.0 %: extracellular, including cell wall
	 12.0 %: mitochondrial
	  8.0 %: vacuolar
	  8.0 %: endoplasmic reticulum
	  4.0 %: cytoplasmic
	  4.0 %: Golgi
	  4.0 %: nuclear

>> prediction for CHO823 is exc

>CHO823F.Seq
ATTATTCAATTTTATTTTTAATCAATTCAAATTAAAAAAAAAAACAATAACTAACTAAGT
TAAAAATAAAAAAATAATAAAGGATGTTGTTTNTAAAAAATATTGGAGTATTTTTTATGA
TATTCCTTGTATCAAAATCCTATGCGACGGATTGTAATAAAATTACTAATGAANAAAAAT
GTCATAAATCTTCGGAATGTATTGTTATAAATTATACACCATGTTGNGGNGAACAAAAAT
GGGCTTGCTCTAAAGGTACATTTGATACTTGTNCATATGAAAATAGTTGTTATANAAATT
CATCCAATAACCAAGTTGTTGAAGTATCAAATAAATGCTTCAATCTTGATGGATTTATTA
AAATTACAACTCCAACCGAGTNTTCTTGTTCTGATGCCAANANNNNNNNNNN

>CHO823Z.Seq
NNNNNNNNNNCCATGATAGATGTTCATTAAGATGTCCNCATGNCCNATGAATGTAAAGTT
GATCCCCAATGGTAAAGAATGTTGNGTCAGATTCCCATAGACCACCACCCACCAGAAGTT
TTGTTCATTAAGATGCCCACCAAAAACATGAATGTAAATTTGATGATCATGGTAAAAAAT
GTTGTGTAAAGATTCATTGTGATGAAGTTTGTGATTTAGATTGTGGTAGAGGTTTTGAAT
GTAAAATTAGACATGATGGTTCAAAATGTTGTGTCCGTTCAGAAAGACCACACCCACCAC
AACATGAAAAATGTAATAAGAGATGCCCACCAGGCCATGAATGTAAAGTTGATCAACATG
GAAAAGAATGTTGCGTTGTTGCCCATAGACCACCACCAAAATGCTCTTTAAGATGTCCAC
CAAGACATGAATGTAGAGTCAACCACTTTGGTGAAGAATGTTGTGTTAAAGTTCACCACG
ATAAATGTTCATTGAGATGTCCACCAGGCCATGAATGTAAAGTTGATCAACATGGAAAAG
AATGTTGCGTTGTTGCCCATAGACCACCACCAAAATGNTCATTAAGATGTCCACCAAAAC
ATGAATGTAGAATCAATCACTTTGGTGAAGAATGCTGTGTTAAAAGTAGAAATGATTGTT
TAACTTGTGAAGACCTAAACTGTGAAAGAAAAGGTTTACATTGTGCCATGAAAACTGTAC
CAATNATAAAGAAAATTGTT

>CHO823P.Seq
ATTATTCAATTTTATTTTTAATCAATTCAAATTAAAAAAAAAAACAATAACTAACTAAGT
TAAAAATAAAAAAATAATAAAGGATGTTGTTTNTAAAAAATATTGGAGTATTTTTTATGA
TATTCCTTGTATCAAAATCCTATGCGACGGATTGTAATAAAATTACTAATGAANAAAAAT
GTCATAAATCTTCGGAATGTATTGTTATAAATTATACACCATGTTGNGGNGAACAAAAAT
GGGCTTGCTCTAAAGGTACATTTGATACTTGTNCATATGAAAATAGTTGTTATANAAATT
CATCCAATAACCAAGTTGTTGAAGTATCAAATAAATGCTTCAATCTTGATGGATTTATTA
AAATTACAACTCCAACCGAGTNTTCTTGTTCTGATGCCAANA----------CCATGATA
GATGTTCATTAAGATGTCCNCATGNCCNATGAATGTAAAGTTGATCCCCAATGGTAAAGA
ATGTTGNGTCAGATTCCCATAGACCACCACCCACCAGAAGTTTTGTTCATTAAGATGCCC
ACCAAAAACATGAATGTAAATTTGATGATCATGGTAAAAAATGTTGTGTAAAGATTCATT
GTGATGAAGTTTGTGATTTAGATTGTGGTAGAGGTTTTGAATGTAAAATTAGACATGATG
GTTCAAAATGTTGTGTCCGTTCAGAAAGACCACACCCACCACAACATGAAAAATGTAATA
AGAGATGCCCACCAGGCCATGAATGTAAAGTTGATCAACATGGAAAAGAATGTTGCGTTG
TTGCCCATAGACCACCACCAAAATGCTCTTTAAGATGTCCACCAAGACATGAATGTAGAG
TCAACCACTTTGGTGAAGAATGTTGTGTTAAAGTTCACCACGATAAATGTTCATTGAGAT
GTCCACCAGGCCATGAATGTAAAGTTGATCAACATGGAAAAGAATGTTGCGTTGTTGCCC
ATAGACCACCACCAAAATGNTCATTAAGATGTCCACCAAAACATGAATGTAGAATCAATC
ACTTTGGTGAAGAATGCTGTGTTAAAAGTAGAAATGATTGTTTAACTTGTGAAGACCTAA
ACTGTGAAAGAAAAGGTTTACATTGTGCCATGAAAACTGTACCAATNATAAAGAAAATTG
TT