>CHO266 (CHO266Q) /CSM/CH/CHO2-C/CHO266Q.Seq.d/
TTCTCTTTTTTAATTTTCTTTTATAAAAATTATTAAAAAGCCAAATTCAAAATAAAAAAA
ATCATTGATAAAAATGGAAAAGAAAATAATATTACTGATTTTATTTTTGTTCTTTATATC
AGGATATTCAATGAATCCTCCAACACCAATAGATGCAATATATGATGATAAATCATTTAC
ATTAATTTTTAATAGTAATCTCCCATATTCTACCCGTTTAATTTTGTATAAAAACGAAAA
AGAACCCAGAACTGAAATGGCACCAAATTATTTCAATTGTTCTCTAGTTGATGGAGAGAG
ACATTGTTTATTCCATTCAGATGAACCATTCTCAAGACTATGGGGTAGTATAGACAGTAA
GGTATGTGTTAGAGATAAATCAAATACTGTTGAGGATTGTACATTTGATGCTTCGGGTTT
AGTATATTATCCAAAAGTATACAATTTGAAATATAGTAAAAAACCAAAAACATCTGGTGA
AGATATAGTCATTACTGGCTCATATTTAAGATTATTTGGTGGTCCTAATTTCCTTATTAA
TTCCATTGATGTAAATAAACCTTTTGTTGTTAAAGGTAATTTCTCTGATCCATCTTTTGA
CTGTAATAATATTACTGTAAXXXXXXXXXX

slf*fsfikiikkpnsk*KKSLIKMEKKIILLILFLFFISGYSMNPPTPIDAIYDDKSFT
LIFNSNLPYSTRLILYKNEKEPRTEMAPNYFNCSLVDGERHCLFHSDEPFSRLWGSIDSK
VCVRDKSNTVEDCTFDASGLVYYPKVYNLKYSKKPKTSGEDIVITGSYLRLFGGPNFLIN
SIDVNKPFVVKGNFSDPSFDCNNITV---

Frame A:
fsfliffykny*kakfkikkiidkngkennitdfifvlyirifnessntnrcni***iiy
inf***spifypfnfv*krkrtqn*ngtklfqlfss*wretlfipfr*tilktmg*yrq*
gmc*r*ikyc*glyi*cfgfsilsksiqfei**ktkniw*ryshywlifkiiwws*fpy*
fh*ck*tfcc*r*fl*sif*l**yyc---


Frame B:
slf*fsfikiikkpnsk*KKSLIKMEKKIILLILFLFFISGYSMNPPTPIDAIYDDKSFT
LIFNSNLPYSTRLILYKNEKEPRTEMAPNYFNCSLVDGERHCLFHSDEPFSRLWGSIDSK
VCVRDKSNTVEDCTFDASGLVYYPKVYNLKYSKKPKTSGEDIVITGSYLRLFGGPNFLIN
SIDVNKPFVVKGNFSDPSFDCNNITV---


Frame C:
lffnfll*kllksqiqnkknh**kwkrk*yy*fyfcslyqdiq*ilqhq*mqymminhlh
*flivishilpv*fciktkknpelkwhqiisivl*lmerdivysiqmnhsqdygvv*tvr
yvleinqillrivhlmlrv*yiiqkyti*nivknqkhlvki*sllahi*dylvvlislli
plm*inllllkvislihlltviill---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHO266 (CHO266Q) /CSM/CH/CHO2-C/CHO266Q.Seq.d/                        735   0.0
SHK756 (SHK756Q) /CSM/SH/SHK7-C/SHK756Q.Seq.d/                        728   0.0
SHK652 (SHK652Q) /CSM/SH/SHK6-C/SHK652Q.Seq.d/                        728   0.0
SHK617 (SHK617Q) /CSM/SH/SHK6-A/SHK617Q.Seq.d/                        728   0.0
SHK103 (SHK103Q) /CSM/SH/SHK1-A/SHK103Q.Seq.d/                        728   0.0
SHJ608 (SHJ608Q) /CSM/SH/SHJ6-A/SHJ608Q.Seq.d/                        728   0.0
SHH790 (SHH790Q) /CSM/SH/SHH7-D/SHH790Q.Seq.d/                        728   0.0
SHH115 (SHH115Q) /CSM/SH/SHH1-A/SHH115Q.Seq.d/                        728   0.0
SHG657 (SHG657Q) /CSM/SH/SHG6-C/SHG657Q.Seq.d/                        728   0.0
SHG145 (SHG145Q) /CSM/SH/SHG1-B/SHG145Q.Seq.d/                        728   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

U09478|U09478.1 Dictyostelium discoideum KAx-3 LagC protein (lagC) mRNA, complete cds.   728   0.0    3
AF258615|AF258615.1 Dictyostelium discoideum LagC protein (lagC) gene, complete cds.   603   0.0    4
AC116982|AC116982.2 Dictyostelium discoideum chromosome 2 map 3622643-3879522 strain AX4, complete sequence.    62   3e-10  9
AY653733|AY653733.1 Acanthamoeba polyphaga mimivirus, complete genome.    32   6e-06  20
CP000046|CP000046.1 Staphylococcus aureus subsp. aureus COL, complete genome.    34   7e-04  25
BA000021|BA000021.3 Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis DNA, complete genome.    32   0.001  17
AL844507|AL844507.1 Plasmodium falciparum chromosome 8.            34   0.004  23
AL844506|AL844506.1 Plasmodium falciparum chromosome  7.           34   0.007  22
BX572093|BX572093.1 Prochlorococcus marinus MED4 complete genome; segment 4/5.    36   0.011  11
AL844509|AL844509.1 Plasmodium falciparum chromosome 13.           36   0.029  22

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A54280(A54280) cell differentiation protein LagC precursor - sli...   351   1e-95
FJ374933_1(FJ374933|pid:none) Dictyostelium discoideum strain QS...   316   3e-85
FJ374923_1(FJ374923|pid:none) Dictyostelium discoideum strain QS...   316   3e-85
FJ374927_1(FJ374927|pid:none) Dictyostelium discoideum strain QS...   316   4e-85
FJ374925_1(FJ374925|pid:none) Dictyostelium discoideum strain QS...   316   4e-85
FJ374948_1(FJ374948|pid:none) Dictyostelium discoideum strain QS...   311   9e-84
FJ374943_1(FJ374943|pid:none) Dictyostelium discoideum strain QS...   308   8e-83
FJ374945_1(FJ374945|pid:none) Dictyostelium discoideum strain QS...   308   8e-83
FJ374944_1(FJ374944|pid:none) Dictyostelium discoideum strain QS...   308   8e-83
FJ374949_1(FJ374949|pid:none) Dictyostelium discoideum strain QS...   308   8e-83

 psg: 1.02  gvh: 0.77  alm: 0.45  top: 0.07  tms: 0.00  mit: 0.26  mip: 0.00
 nuc: 0.03  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: extracellular, including cell wall
	 20.0 %: cytoplasmic
	 12.0 %: vacuolar
	 12.0 %: endoplasmic reticulum
	  4.0 %: mitochondrial
	  4.0 %: nuclear

>> prediction for CHO266 is exc

>CHO266F.Seq
TTCTCTTTTTTAATTTTCTTTTATAAAAATTATTAAAAAGCCAAATTCAAAATAAAAAAA
ATCATTGATAAAAATGGAAAAGAAAATAATATTACTGATTTTATTTTTGTTCTTTATATC
AGGATATTCAATGAATCCTCCAACACCAATAGATGCAATATATGATGATAAATCATTTAC
ATTAATTTTTAATAGTAATCTCCCATATTCTACCCGTTTAATTTTGTATAAAAACGAAAA
AGAACCCAGAACTGAAATGGCACCAAATTATTTCAATTGTTCTCTAGTTGATGGAGAGAG
ACATTGTTTATTCCATTCAGATGAACCATTCTCAAGACTATGGGGTAGTATAGACAGTAA
GGTATGTGTTAGAGATAAATCAAATACTGTTGAGGATTGTACATTTGATGCTTCGGGTTT
AGTATATTATCCAAAAGTATACAATTTGAAATATAGTAAAAAACCAAAAACATCTGGTGA
AGATATAGTCATTACTGGCTCATATTTAAGATTATTTGGTGGTCCTAATTTCCTTATTAA
TTCCATTGATGTAAATAAACCTTTTGTTGTTAAAGGTAATTTCTCTGATCCATCTTTTGA
CTGTAATAATATTACTGTAANNNNNNNNNN