>CHN872 (CHN872Q) /CSM/CH/CHN8-C/CHN872Q.Seq.d/
AATTACAATTTATAAATTTGTATTTATAAATAAATATATATATAAAAAATGGTTAAAAAT
ATAAAAATATTTTTATCATTATTTTTTGTAGTTGTATTAGGTTTATTAGCTACAACAGCA
AATTCAATGGTTATTGGTATTGATTTAGGTTCACAAACATTTAAAGTATCATTAATTAAA
CCAGGTGCATTTGAAACCGTTTTAAATGAACAATCTGGTAGAAAAACAATTTCATCTGTT
GGTTGGTTTAAAGATGAAAGATTATTTTCTTCTGATTCATTTAGTGTTTGGGCTAGAAAT
CCAAAACAAAATTATAATTTAATTCAAGCATTTTTAGGTATTAAATATAAAGAAGGATTA
GTTGAAGAGATTAGTAATGGATTACCATTAGGATTTAAGGTAAAGAATGATACTGTTAGA
AATACAGTTTCAATTGTATACGATGATGATACCAATTATTCAGCAGAGGAATTGACAGGT
ATGTTATTAAGAAGAGTTAAGGATATGGCATCGTCATATGCAGGTTCATCAATCAAGGAT
TGTGCAATCACAATTCCACCTTACTTTACACAACAACAAAGACAAGCATTATTGGATGCT
GCTCAATTXXXXXXXXXXAAAGAAGAGGAAGAAGAAGTTGTAGTTGTTGAAAAAGTTATT
GAATATATTCCAAAAAACAATTAGAGTACCATTAAATTTCACAATTAAATATAATGGTTG
TGTTGAACCATTATCAAAGGAATTAAGTCAAGAAAGTAATGATAGAATTAATAAATTGGA
TCAAGTTGATAGAATTTTAAGAGAATTAAGACAAGAGAGAAATAATTTAGAATCATTTAT
TTATGAAACTAAAGATAAATTGGAATCTAATGAAGAATATTTGAAATGTTCAACTCAACA
AGAGAGAGATCAATTGGTTGAAGAATTGGATAAAACATCTGCATGGTTATCGGATGCTTT
GGATAATGATAATACTGAAACCGAGGAATACCGTAAACAATTGAAAGATATTAAAAAGAA
AGCTGACAAAATCGTTAACCGTGTCTCTCAATACCAATTGGTACCTGTCGCATTGGAAGA
GTTGGAAGACACTGTTGATAAAGTTAAACCAATGTTTGAAATCGCTTCAAAGGATTTAAA
TGTAACCGCTGAGGAATTAAAAGAAACTACTGATAAAATTCAATCCGTTTCCGATTGGGT
ACAAGAAAAGAAATCTGAATTCAAATTAGCTGATTATTCAAAAGATTTACAAACTTCCTC
TTTTGATATTAAATTTAAACTTTATGATTTAGAAAGAACAATTAAAGAAATTTTAAAAAA
GAAAAAGAAACCTGTTAAACCATCCTCCTCTAAAAAAGATAAATCTTCAAAATCTTCAAA
AGGTAATCAAATTCAACNANAAAAAGAT

nynl*iciyk*iyi*KMVKNIKIFLSLFFVVVLGLLATTANSMVIGIDLGSQTFKVSLIK
PGAFETVLNEQSGRKTISSVGWFKDERLFSSDSFSVWARNPKQNYNLIQAFLGIKYKEGL
VEEISNGLPLGFKVKNDTVRNTVSIVYDDDTNYSAEELTGMLLRRVKDMASSYAGSSIKD
CAITIPPYFTQQQRQALLDAAQ---

---KEEEEEVVVVEKVIEYIPKNN*stikfhn*i*wlc*tiikgiksrk***n**igss*
*nfkriktrek*friiyl*n*r*igi**rifemfnstrersig*rig*nicmvigcfg**
*y*nrgip*tiery*kes*qnr*pclsipigtcrigrvgrhc**s*tnv*nrfkgfkcnr
*gikrny**nsirfrlgtrkei*iqis*lfkrftnflf*y*i*tl*frknn*rnfkkeke
tc*till*kr*ifkifkr*snstxkr

Frame A:
nynl*iciyk*iyi*KMVKNIKIFLSLFFVVVLGLLATTANSMVIGIDLGSQTFKVSLIK
PGAFETVLNEQSGRKTISSVGWFKDERLFSSDSFSVWARNPKQNYNLIQAFLGIKYKEGL
VEEISNGLPLGFKVKNDTVRNTVSIVYDDDTNYSAEELTGMLLRRVKDMASSYAGSSIKD
CAITIPPYFTQQQRQALLDAAQ---

---KEEEEEVVVVEKVIEYIPKNN*stikfhn*i*wlc*tiikgiksrk***n**igss*
*nfkriktrek*friiyl*n*r*igi**rifemfnstrersig*rig*nicmvigcfg**
*y*nrgip*tiery*kes*qnr*pclsipigtcrigrvgrhc**s*tnv*nrfkgfkcnr
*gikrny**nsirfrlgtrkei*iqis*lfkrftnflf*y*i*tl*frknn*rnfkkeke
tc*till*kr*ifkifkr*snstxkr

Frame B:
itiykfvfinkyiykkwlki*kyfyhyfl*ly*vy*lqqqiqwllvli*vhkhlkyh*ln
qvhlkpf*mnnlvekqfhllvglkmkdyfllihlvfgleiqnkiii*fkhf*vlnikkd*
lkrlvmdyh*dlr*rmilleiqfqlytmmipiiqqrn*qvcy*eelriwhrhmqvhqsri
vqsqfhltlhnnkdkhywmlln---

---kkrkkkl*llkkllnifqktirvplnftikyngcveplskelsqesndrinkldqvd
rilrelrqernnlesfiyetkdklesneeylkcstqqerdqlveeldktsawlsdaldnd
nteteeyrkqlkdikkkadkivnrvsqyqlvpvaleeledtvdkvkpmfeiaskdlnvta
eelkettdkiqsvsdwvqekksefkladyskdlqtssfdikfklydlertikeilkkkkk
pvkpssskkdkssksskgnqiqxxkd

Frame C:
lqfinlyl*iniyikng*kyknifiiifcscirfisynskfngywy*frftni*siin*t
rci*nrfk*tiw*knnficwlv*r*kiiff*fi*clg*ksktkl*fnssifry*i*rris
*rd**witiri*gke*yc*kysfncir**yqlfsrgidryvikks*gygivicrfinqgl
cnhnstllytttktsiigccsi---

---rrgrrscsc*ksy*iyskkqleyh*isqlnimvvlnhyqrn*vkkvmielinwikli
ef*en*dkreii*nhlfmklkinwnlmkni*nvqlnkreinwlknwikhlhgyrmlwimi
ilkprntvnn*kilkrkltksltvslntnwylshwkswktlliklnqclkslqri*m*pl
rn*kkllikfnpfpigykkrnlnsn*liiqkiyklpllilnlnfmi*keqlkkf*krkrn
llnhpplkkinlqnlqkvikfnxkk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHN872 (CHN872Q) /CSM/CH/CHN8-C/CHN872Q.Seq.d/                       2361   0.0
AHR122 (AHR122Q) /CSM/AH/AHR1-A/AHR122Q.Seq.d/                       1316   0.0
AHI423 (AHI423Q) /CSM/AH/AHI4-A/AHI423Q.Seq.d/                       1316   0.0
AHF613 (AHF613Q) /CSM/AH/AHF6-A/AHF613Q.Seq.d/                       1316   0.0
AHO795 (AHO795Q) /CSM/AH/AHO7-D/AHO795Q.Seq.d/                       1308   0.0
AHF505 (AHF505Q) /CSM/AH/AHF5-A/AHF505Q.Seq.d/                       1308   0.0
SHC629 (SHC629Q) /CSM/SH/SHC6-B/SHC629Q.Seq.d/                       1306   0.0
SHG291 (SHG291Q) /CSM/SH/SHG2-D/SHG291Q.Seq.d/                       1304   0.0
AHE572 (AHE572Q) /CSM/AH/AHE5-C/AHE572Q.Seq.d/                       1304   0.0
AHL129 (AHL129Q) /CSM/AH/AHL1-B/AHL129Q.Seq.d/                       1289   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence.  1229   0.0    26
AP006628|AP006628.1 Onion yellows phytoplasma OY-M DNA, complete genome.    40   9e-08  29
CP000046|CP000046.1 Staphylococcus aureus subsp. aureus COL, complete genome.    42   1e-07  33
BX571857|BX571857.1 Staphylococcus aureus strain MSSA476, complete genome.    42   1e-07  34
BA000033|BA000033.2 Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2.    42   2e-07  35
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4, complete sequence.    36   6e-07  22
AE017263|AE017263.1 Mesoplasma florum L1 complete genome.          36   1e-06  32
BA000018|BA000018.3 Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome.    42   2e-06  34
BA000017|BA000017.4 Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome.    42   3e-06  33
BA000021|BA000021.3 Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis DNA, complete genome.    38   5e-06  26

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC047807_1(BC047807|pid:none) Danio rerio hypoxia up-regulated 1...    98   8e-19
BC071372_1(BC071372|pid:none) Danio rerio hypoxia up-regulated 1...    98   8e-19
AP003983_11(AP003983|pid:none) Oryza sativa Japonica Group genom...    97   1e-18
BC043837_1(BC043837|pid:none) Xenopus laevis similar to calcium ...    95   7e-18
BT055084_1(BT055084|pid:none) Zea mays full-length cDNA clone ZM...    95   7e-18
BC078088_1(BC078088|pid:none) Xenopus laevis similar to calcium ...    95   7e-18
BC093532_1(BC093532|pid:none) Xenopus laevis similar to calcium ...    95   7e-18
AY051008_1(AY051008|pid:none) Arabidopsis thaliana putative HSP ...    94   1e-17
AK229980_1(AK229980|pid:none) Arabidopsis thaliana mRNA for HSP ...    93   2e-17
G71433(G71433)probable heat shock protein 110 - Arabidopsis thal...    93   2e-17

 psg: 0.99  gvh: 0.68  alm: 0.42  top: 0.33  tms: 0.00  mit: 0.30  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: extracellular, including cell wall
	 16.0 %: vacuolar
	  8.0 %: cytoplasmic
	  8.0 %: nuclear
	  8.0 %: endoplasmic reticulum
	  4.0 %: mitochondrial
	  4.0 %: Golgi

>> prediction for CHN872 is exc

>CHN872F.Seq
AATTACAATTTATAAATTTGTATTTATAAATAAATATATATATAAAAAATGGTTAAAAAT
ATAAAAATATTTTTATCATTATTTTTTGTAGTTGTATTAGGTTTATTAGCTACAACAGCA
AATTCAATGGTTATTGGTATTGATTTAGGTTCACAAACATTTAAAGTATCATTAATTAAA
CCAGGTGCATTTGAAACCGTTTTAAATGAACAATCTGGTAGAAAAACAATTTCATCTGTT
GGTTGGTTTAAAGATGAAAGATTATTTTCTTCTGATTCATTTAGTGTTTGGGCTAGAAAT
CCAAAACAAAATTATAATTTAATTCAAGCATTTTTAGGTATTAAATATAAAGAAGGATTA
GTTGAAGAGATTAGTAATGGATTACCATTAGGATTTAAGGTAAAGAATGATACTGTTAGA
AATACAGTTTCAATTGTATACGATGATGATACCAATTATTCAGCAGAGGAATTGACAGGT
ATGTTATTAAGAAGAGTTAAGGATATGGCATCGTCATATGCAGGTTCATCAATCAAGGAT
TGTGCAATCACAATTCCACCTTACTTTACACAACAACAAAGACAAGCATTATTGGATGCT
GCTCAATTNNNNNNNNNN

>CHN872Z.Seq
NNNNNNNNNNAAAGAAGAGGAAGAAGAAGTTGTAGTTGTTGAAAAAGTTATTGAATATAT
TCCAAAAAACAATTAGAGTACCATTAAATTTCACAATTAAATATAATGGTTGTGTTGAAC
CATTATCAAAGGAATTAAGTCAAGAAAGTAATGATAGAATTAATAAATTGGATCAAGTTG
ATAGAATTTTAAGAGAATTAAGACAAGAGAGAAATAATTTAGAATCATTTATTTATGAAA
CTAAAGATAAATTGGAATCTAATGAAGAATATTTGAAATGTTCAACTCAACAAGAGAGAG
ATCAATTGGTTGAAGAATTGGATAAAACATCTGCATGGTTATCGGATGCTTTGGATAATG
ATAATACTGAAACCGAGGAATACCGTAAACAATTGAAAGATATTAAAAAGAAAGCTGACA
AAATCGTTAACCGTGTCTCTCAATACCAATTGGTACCTGTCGCATTGGAAGAGTTGGAAG
ACACTGTTGATAAAGTTAAACCAATGTTTGAAATCGCTTCAAAGGATTTAAATGTAACCG
CTGAGGAATTAAAAGAAACTACTGATAAAATTCAATCCGTTTCCGATTGGGTACAAGAAA
AGAAATCTGAATTCAAATTAGCTGATTATTCAAAAGATTTACAAACTTCCTCTTTTGATA
TTAAATTTAAACTTTATGATTTAGAAAGAACAATTAAAGAAATTTTAAAAAAGAAAAAGA
AACCTGTTAAACCATCCTCCTCTAAAAAAGATAAATCTTCAAAATCTTCAAAAGGTAATC
AAATTCAACNANAAAAAGAT

>CHN872P.Seq
AATTACAATTTATAAATTTGTATTTATAAATAAATATATATATAAAAAATGGTTAAAAAT
ATAAAAATATTTTTATCATTATTTTTTGTAGTTGTATTAGGTTTATTAGCTACAACAGCA
AATTCAATGGTTATTGGTATTGATTTAGGTTCACAAACATTTAAAGTATCATTAATTAAA
CCAGGTGCATTTGAAACCGTTTTAAATGAACAATCTGGTAGAAAAACAATTTCATCTGTT
GGTTGGTTTAAAGATGAAAGATTATTTTCTTCTGATTCATTTAGTGTTTGGGCTAGAAAT
CCAAAACAAAATTATAATTTAATTCAAGCATTTTTAGGTATTAAATATAAAGAAGGATTA
GTTGAAGAGATTAGTAATGGATTACCATTAGGATTTAAGGTAAAGAATGATACTGTTAGA
AATACAGTTTCAATTGTATACGATGATGATACCAATTATTCAGCAGAGGAATTGACAGGT
ATGTTATTAAGAAGAGTTAAGGATATGGCATCGTCATATGCAGGTTCATCAATCAAGGAT
TGTGCAATCACAATTCCACCTTACTTTACACAACAACAAAGACAAGCATTATTGGATGCT
GCTCAATT----------AAAGAAGAGGAAGAAGAAGTTGTAGTTGTTGAAAAAGTTATT
GAATATATTCCAAAAAACAATTAGAGTACCATTAAATTTCACAATTAAATATAATGGTTG
TGTTGAACCATTATCAAAGGAATTAAGTCAAGAAAGTAATGATAGAATTAATAAATTGGA
TCAAGTTGATAGAATTTTAAGAGAATTAAGACAAGAGAGAAATAATTTAGAATCATTTAT
TTATGAAACTAAAGATAAATTGGAATCTAATGAAGAATATTTGAAATGTTCAACTCAACA
AGAGAGAGATCAATTGGTTGAAGAATTGGATAAAACATCTGCATGGTTATCGGATGCTTT
GGATAATGATAATACTGAAACCGAGGAATACCGTAAACAATTGAAAGATATTAAAAAGAA
AGCTGACAAAATCGTTAACCGTGTCTCTCAATACCAATTGGTACCTGTCGCATTGGAAGA
GTTGGAAGACACTGTTGATAAAGTTAAACCAATGTTTGAAATCGCTTCAAAGGATTTAAA
TGTAACCGCTGAGGAATTAAAAGAAACTACTGATAAAATTCAATCCGTTTCCGATTGGGT
ACAAGAAAAGAAATCTGAATTCAAATTAGCTGATTATTCAAAAGATTTACAAACTTCCTC
TTTTGATATTAAATTTAAACTTTATGATTTAGAAAGAACAATTAAAGAAATTTTAAAAAA
GAAAAAGAAACCTGTTAAACCATCCTCCTCTAAAAAAGATAAATCTTCAAAATCTTCAAA
AGGTAATCAAATTCAACNANAAAAAGAT