>CHN863 (CHN863Q) /CSM/CH/CHN8-C/CHN863Q.Seq.d/
TGGCCTACTGGAAAAAACTATTTAAAAAAAAATAGAGAATATAGTTATATATATAACACA
CAAAAAAATTCATATCACATTATTGTTTTTCATTAATTTATAAACAATAATATATATATA
ATAAACACTCTATCATTTAATTTTAATAAAAAAAAAAXXXXXXXXXXTGGTCAAGGTGCT
GTTCAAACCGCTCTCTTATTCTTGGCTCTCATTTCCATTCCAGTTATGTTGGTCATTAAA
CCATTGTTCATGAAGAGATTCCACTTCCAAGAAGTCGAAAGAAAGAAATTAGGTCACCAC
GAAGAGGAACATGATGATGAAGCTCTCTACACTGGTCATCACGGTGAAGAATTTGAAATG
GGTGAAGTCTTTGTTCATCAAGTCATTCATACCATCGAGTTTGTTTTGGGTGCTGTTTCA
AATACTGCCTCTTATCTTCGTTTATGGGCTCTTTCATTGGCTCACTCTGAGTTATCTTCT
GTATTTTGGGAACGTATTCTCATTGGTCAAGTCGAACGTGGTAATCCATTCTTGGCTTTC
GTTGGTTTTGGTGCTTGGTTAGGTGCCTCTGTTGCTGNACTTTCACTTATGGAATCCCTT
TCTGCTTTCTTGCACGCTCTTAGACTTCATTGGGTAGAATTCCAAAATAAATTCTATATT
GGTGATGGTGTTAGATTCATTCCATACAGTGCCACTCGATTCTTTC

wptgknylkknreysyiyntqknsyhiivfh*FINNNIYIINTLSFNFNKKK---

---GQGAVQTALLFLALISIPVMLVIKPLFMKRFHFQEVERKKLGHHEEEHDDEALYTGH
HGEEFEMGEVFVHQVIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFWERILIGQVER
GNPFLAFVGFGAWLGASVAXLSLMESLSAFLHALRLHWVEFQNKFYIGDGVRFIPYSATR
FF

Frame A:
wptgknylkknreysyiyntqknsyhiivfh*FINNNIYIINTLSFNFNKKK---

---wsrccsnrslilgshfhssyvgh*tivheeiplprsrkkeirsprrgt***sslhws
sr*ri*ng*slcssshsyhrvcfgccfkycllssfmgsfigsl*vifcilgtyshwssrt
w*silgfrwfwclvrclccxtftygipfcflars*tslgripk*ilyw*wc*ihsiqchs
il

Frame B:
gllekti*kkieniviyithkkihitllffinl*tiiyi**tlyhlilikkk---

---GQGAVQTALLFLALISIPVMLVIKPLFMKRFHFQEVERKKLGHHEEEHDDEALYTGH
HGEEFEMGEVFVHQVIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFWERILIGQVER
GNPFLAFVGFGAWLGASVAXLSLMESLSAFLHALRLHWVEFQNKFYIGDGVRFIPYSATR
FF

Frame C:
aywkklfkkk*ri*lyi*htkkfishycfsliykq*yiynkhsii*f**kk---

---vkvlfkplsyswlsfpfqlcwslnhcs*rdstskkskern*vttkrnmmmklstlvi
tvknlkwvkslfiksfipsslfwvlfqilplifvyglfhwltlsyllyfgnvfslvksnv
vihswlslvlvlg*vplllxfhlwnpfllsctlldfig*nskinsilvmvldsfhtvpld
sf

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHN863 (CHN863Q) /CSM/CH/CHN8-C/CHN863Q.Seq.d/                       1063   0.0
AFB674 (AFB674Q) /CSM/AF/AFB6-D/AFB674Q.Seq.d/                       1055   0.0
VHP711 (VHP711Q) /CSM/VH/VHP7-A/VHP711Q.Seq.d/                       1041   0.0
VHN293 (VHN293Q) /CSM/VH/VHN2-D/VHN293Q.Seq.d/                       1041   0.0
SHL126 (SHL126Q) /CSM/SH/SHL1-B/SHL126Q.Seq.d/                       1041   0.0
SHJ790 (SHJ790Q) /CSM/SH/SHJ7-D/SHJ790Q.Seq.d/                       1041   0.0
SHE806 (SHE806Q) /CSM/SH/SHE8-A/SHE806Q.Seq.d/                       1041   0.0
CHR818 (CHR818Q) /CSM/CH/CHR8-A/CHR818Q.Seq.d/                       1041   0.0
CHR349 (CHR349Q) /CSM/CH/CHR3-C/CHR349Q.Seq.d/                       1041   0.0
CHM455 (CHM455Q) /CSM/CH/CHM4-C/CHM455Q.Seq.d/                       1041   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

U38803|U38803.1 Dictyostelium discoideum vacuolar proton ATPase 100-kDa subunit (vatM) mRNA, complete cds.  1039   0.0    2
BF272276|BF272276.2 GA__Eb0014G21f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Eb0014G21f, mRNA sequence.    72   9e-14  2
BU012351|BU012351.1 QGJ1L02.yg.ab1 QG_EFGHJ lettuce serriola Lactuca sativa cDNA clone QGJ1L02, mRNA sequence.    80   2e-11  2
BQ853466|BQ853466.1 QGB20J11.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGB20J11, mRNA sequence.    80   6e-11  1
AC137668|AC137668.18 Medicago truncatula clone mth2-5f8, complete sequence.    52   2e-09  6
CV164410|CV164410.1 rsmsxl_003361.y1.scf cDNA Library of Salvia miltiorrhiza Salvia miltiorrhiza cDNA 5', mRNA sequence.    54   3e-09  3
CV172465|CV172465.1 rsmsxlre_008717.z1.scf cDNA Library of Salvia miltiorrhiza Salvia miltiorrhiza cDNA 5', mRNA sequence.    54   5e-09  3
CO124018|CO124018.1 GR__Eb06J21.r GR__Eb Gossypium raimondii cDNA clone GR__Eb06J21 3', mRNA sequence.    72   1e-08  1
CO114922|CO114922.1 GR__Eb016F15.r GR__Eb Gossypium raimondii cDNA clone GR__Eb016F15 3', mRNA sequence.    72   1e-08  1
CO114094|CO114094.1 GR__Eb015A17.r GR__Eb Gossypium raimondii cDNA clone GR__Eb015A17 3', mRNA sequence.    72   1e-08  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54E04) RecName: Full=Vacuolar proton translocating ATPase 100 ...   353   2e-96
U38803_1(U38803|pid:none) Dictyostelium discoideum vacuolar prot...   353   2e-96
AC093568_14(AC093568|pid:none) Oryza sativa chromosome 10 clone ...   196   6e-49
AL035679_18(AL035679|pid:none) Arabidopsis thaliana DNA chromoso...   192   1e-47
AK221976_1(AK221976|pid:none) Arabidopsis thaliana mRNA for hypo...   192   1e-47
AK227321_1(AK227321|pid:none) Arabidopsis thaliana mRNA for hypo...   192   1e-47
AK101151_1(AK101151|pid:none) Oryza sativa Japonica Group cDNA c...   191   1e-47
AK230210_1(AK230210|pid:none) Arabidopsis thaliana mRNA for hypo...   191   2e-47
CP000588_396(CP000588|pid:none) Ostreococcus lucimarinus CCE9901...   186   6e-46
CR954208_391(CR954208|pid:none) Ostreococcus tauri strain OTTH05...   186   7e-46

 psg: 0.85  gvh: 0.62  alm: 0.18  top: 0.50  tms: 0.07  mit: 0.32  mip: 0.09
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.19  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 1.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 24.0 %: endoplasmic reticulum
	 20.0 %: cytoplasmic
	 16.0 %: Golgi
	 16.0 %: mitochondrial
	 16.0 %: nuclear
	  4.0 %: plasma membrane
	  4.0 %: vesicles of secretory system

>> prediction for CHN863 is end

>CHN863F.Seq
TGGCCTACTGGAAAAAACTATTTAAAAAAAAATAGAGAATATAGTTATATATATAACACA
CAAAAAAATTCATATCACATTATTGTTTTTCATTAATTTATAAACAATAATATATATATA
ATAAACACTCTATCATTTAATTTTAATAAAAAAAAAANNNNNNNNNN

>CHN863Z.Seq
NNNNNNNNNNTGGTCAAGGTGCTGTTCAAACCGCTCTCTTATTCTTGGCTCTCATTTCCA
TTCCAGTTATGTTGGTCATTAAACCATTGTTCATGAAGAGATTCCACTTCCAAGAAGTCG
AAAGAAAGAAATTAGGTCACCACGAAGAGGAACATGATGATGAAGCTCTCTACACTGGTC
ATCACGGTGAAGAATTTGAAATGGGTGAAGTCTTTGTTCATCAAGTCATTCATACCATCG
AGTTTGTTTTGGGTGCTGTTTCAAATACTGCCTCTTATCTTCGTTTATGGGCTCTTTCAT
TGGCTCACTCTGAGTTATCTTCTGTATTTTGGGAACGTATTCTCATTGGTCAAGTCGAAC
GTGGTAATCCATTCTTGGCTTTCGTTGGTTTTGGTGCTTGGTTAGGTGCCTCTGTTGCTG
NACTTTCACTTATGGAATCCCTTTCTGCTTTCTTGCACGCTCTTAGACTTCATTGGGTAG
AATTCCAAAATAAATTCTATATTGGTGATGGTGTTAGATTCATTCCATACAGTGCCACTC
GATTCTTTC

>CHN863P.Seq
TGGCCTACTGGAAAAAACTATTTAAAAAAAAATAGAGAATATAGTTATATATATAACACA
CAAAAAAATTCATATCACATTATTGTTTTTCATTAATTTATAAACAATAATATATATATA
ATAAACACTCTATCATTTAATTTTAATAAAAAAAAAA----------TGGTCAAGGTGCT
GTTCAAACCGCTCTCTTATTCTTGGCTCTCATTTCCATTCCAGTTATGTTGGTCATTAAA
CCATTGTTCATGAAGAGATTCCACTTCCAAGAAGTCGAAAGAAAGAAATTAGGTCACCAC
GAAGAGGAACATGATGATGAAGCTCTCTACACTGGTCATCACGGTGAAGAATTTGAAATG
GGTGAAGTCTTTGTTCATCAAGTCATTCATACCATCGAGTTTGTTTTGGGTGCTGTTTCA
AATACTGCCTCTTATCTTCGTTTATGGGCTCTTTCATTGGCTCACTCTGAGTTATCTTCT
GTATTTTGGGAACGTATTCTCATTGGTCAAGTCGAACGTGGTAATCCATTCTTGGCTTTC
GTTGGTTTTGGTGCTTGGTTAGGTGCCTCTGTTGCTGNACTTTCACTTATGGAATCCCTT
TCTGCTTTCTTGCACGCTCTTAGACTTCATTGGGTAGAATTCCAAAATAAATTCTATATT
GGTGATGGTGTTAGATTCATTCCATACAGTGCCACTCGATTCTTTC