>CHN802 (CHN802Q) /CSM/CH/CHN8-A/CHN802Q.Seq.d/
ATATTTTCTTCACCAAAAACTATTGAAAATGTTTGAAAGAACATTGGTTGACCTCATCAG
AGGTATTAGAAACCATAAAAAGAATGAAACTAAATTTATAAATCAATGTATAAATGAAAT
TAAAGAAGAATTAAAAGGTGATATGCAAAAAAAGACAGTTGCCGTCCAAAAATTAACATA
TATTCAAATGTTAGGATTTGATATTAGTTGGGCATCATTTAAAATTGTTGAAGTTATGAG
TTGTAATAAATTTTCATCAAAAAGAATTGGATATTTAGCAGCATCACAAAGTTTTAATGA
AGGAACAGATGTTATTGTATTGGCAACTCATCAAATTAGAAAGGATTTCTTATCATCGAA
TCAAAGTGAAGCCTATTTAGCATTGAATTGTCTTTCAAATATTTGTACAACCGATTTAGC
AAGAGAGTTGGCAAATGATATCCTAACATTATTGAGTACACAAAAAACACATATTTTAAA
GAGAGCCATCACGGTGTTATATAAGATATTCTTGAGATATCCAGAATCGCTAAXXXXXXX
XXXACCATCACATATTCAATCAGTTTACATGTTAAATTCATTAAAAGTTTTCTCTCATGC
TTGTGCAAAAGCAAACGGTGACAAAATCCCATCATTAGACGATGATGATGAGGAAGAGGA
AGCACAAGAAGAAGAGGACCAAAATGAAATCACTCATGAAATCGTTCAAGAATGTCTTGA
AATTATTAAATCACGTTTAACAATTTTCACTCATAGTATTTACCTAAATGTACAAGAACG
TGCTTGTCTTATTAATGAATTATTATCATTCTACACAGTCACTAAAGAACAAGGTAATAA
TATTTCAAAGGAGTTAATTTCATTGTTCACAGAACAATTAAATCCAGTTGGTCCAAAAGC
TCAAAAGAAAGTACCAATTCCAGAAGGTTTAGATTTAGATGAATGGATTAATGATCCAAA
ACATCAAGAACCAATTGAAGAGGATGAAGATGATGATATTTTCAATACAAGTACATCTAG
TCATCAAAAGAAACATCACAAACATCACCGTGGAGGATATGATGGTGATGATGATGAAGA
TGATGAAACCAATAGTTCTCATTCAGGTCATTCAAGTAGTAATTTCAATCGTCATCCAAT
TGATATTCAAAGACAAAAGGAAGAAAGATTAAGAAAACAAGCTAATAATCCATATATGTT
GGGTGGTAAAGTATCAAAGAAATTATCAACCAAGATCCTGAAAATATTCCAGGGTTCAAC
TAACTGGGATTTAGGTCATCTTCATGTTGGTGCATCATCAAATAGACCAAGCCATCAAAA
G

YFLHQKLLKMFERTLVDLIRGIRNHKKNETKFINQCINEIKEELKGDMQKKTVAVQKLTY
IQMLGFDISWASFKIVEVMSCNKFSSKRIGYLAASQSFNEGTDVIVLATHQIRKDFLSSN
QSEAYLALNCLSNICTTDLARELANDILTLLSTQKTHILKRAITVLYKIFLRYPESL---

---PSHIQSVYMLNSLKVFSHACAKANGDKIPSLDDDDEEEEAQEEEDQNEITHEIVQEC
LEIIKSRLTIFTHSIYLNVQERACLINELLSFYTVTKEQGNNISKELISLFTEQLNPVGP
KAQKKVPIPEGLDLDEWINDPKHQEPIEEDEDDDIFNTSTSSHQKKHHKHHRGGYDGDDD
EDDETNSSHSGHSSSNFNRHPIDIQRQKEERLRKQANNPYMLGGKVSKKLSTKILKIFQG
STNWDLGHLHVGASSNRPSHQK

Frame A:
ifsspktienv*knig*phqry*kp*ke*n*iyksmyk*n*rrikr*yakkdscrpkini
ysnvri*y*lgii*nc*syel**ifikknwifssitkf**rnrcycignssn*kgfliie
sk*slfsielsfkylynrfskrvgk*ypniieytkntyfkeshhgvi*dileisria---

---titysislhvkfiksflsclckskr*qnpiirr***grgstrrrgpk*nhs*nrsrm
s*ny*itfnnfhs*ylpkctrtclsy**iiiilhsh*rtr**yfkgvnfivhrtikssws
ksskestnsrrfrfr*md**sktsrtn*rg*r**yfqykyi*ssketsqtspwri*w***
*r**nq*fsfrsfk**fqsssn*ysktkgrkikkts**siyvgw*sikeiinqdpenipg
fn*lgfrssscwciik*tkpsk

Frame B:
YFLHQKLLKMFERTLVDLIRGIRNHKKNETKFINQCINEIKEELKGDMQKKTVAVQKLTY
IQMLGFDISWASFKIVEVMSCNKFSSKRIGYLAASQSFNEGTDVIVLATHQIRKDFLSSN
QSEAYLALNCLSNICTTDLARELANDILTLLSTQKTHILKRAITVLYKIFLRYPESL---

---PSHIQSVYMLNSLKVFSHACAKANGDKIPSLDDDDEEEEAQEEEDQNEITHEIVQEC
LEIIKSRLTIFTHSIYLNVQERACLINELLSFYTVTKEQGNNISKELISLFTEQLNPVGP
KAQKKVPIPEGLDLDEWINDPKHQEPIEEDEDDDIFNTSTSSHQKKHHKHHRGGYDGDDD
EDDETNSSHSGHSSSNFNRHPIDIQRQKEERLRKQANNPYMLGGKVSKKLSTKILKIFQG
STNWDLGHLHVGASSNRPSHQK

Frame C:
ifftkny*kclkehwltssevletikrmklnl*inv*mklkkn*kvickkrqlpskn*hi
fkc*dlilvghhlkllkl*vvinfhqkeldi*qhhkvlmkeqmllywqliklerisyhri
kvkpi*h*ivfqifvqpi*qeswqmis*hy*vhkkhif*repsrcyirys*diqnr*---

---hhifnqftc*ih*kfslmlvqkqtvtkshh*tmmmrkrkhkkkrtkmkslmksfknv
lkllnhv*qfslivft*myknvlvllmnyyhstqslknkviifqrs*fhcsqnn*iqlvq
klkrkyqfqkv*i*mnglmiqniknqlkrmkmmifsiqvhlvikrnitnitvedmmvmmm
kmmkpivliqviqvvisiviqlifkdkrkkd*enkliihicwvvkyqrnyqprs*kysrv
qltgi*vifmlvhhqidqaik

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHN802 (CHN802Q) /CSM/CH/CHN8-A/CHN802Q.Seq.d/                       1990   0.0
VHN748 (VHN748Q) /CSM/VH/VHN7-B/VHN748Q.Seq.d/                       1015   0.0
VHH681 (VHH681Q) /CSM/VH/VHH6-D/VHH681Q.Seq.d/                       1015   0.0
CHL747 (CHL747Q) /CSM/CH/CHL7-B/CHL747Q.Seq.d/                       1015   0.0
AHN471 (AHN471Q) /CSM/AH/AHN4-C/AHN471Q.Seq.d/                       1015   0.0
AHL367 (AHL367Q) /CSM/AH/AHL3-C/AHL367Q.Seq.d/                       1015   0.0
AHF385 (AHF385Q) /CSM/AH/AHF3-D/AHF385Q.Seq.d/                       1015   0.0
AHO526 (AHO526Q) /CSM/AH/AHO5-B/AHO526Q.Seq.d/                       1013   0.0
VHK160 (VHK160Q) /CSM/VH/VHK1-C/VHK160Q.Seq.d/                       1007   0.0
VHL879 (VHL879Q) /CSM/VH/VHL8-D/VHL879Q.Seq.d/                       1003   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AE017263|AE017263.1 Mesoplasma florum L1 complete genome.          38   8e-08  31
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence.    40   2e-07  23
AC116982|AC116982.2 Dictyostelium discoideum chromosome 2 map 3622643-3879522 strain AX4, complete sequence.    40   4e-07  20
AL844509|AL844509.1 Plasmodium falciparum chromosome 13.           36   8e-07  26
CR382400|CR382400.1 Plasmodium falciparum chromosome 6, complete sequence; segment 3/5.    40   1e-06  17
AE014826|AE014826.1 Plasmodium falciparum 3D7 chromosome 14 section 11 of 13 of the complete sequence.    36   1e-05  15
CR382137|CR382137.1 Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii.    44   1e-05  31
CR382139|CR382139.1 Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii.    36   3e-05  35
AC117075|AC117075.2 Dictyostelium discoideum chromosome 2 map 5201047-5455781 strain AX4, complete sequence.    40   7e-05  16
AL844507|AL844507.1 Plasmodium falciparum chromosome 8.            34   8e-05  29

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC005142_1(BC005142|pid:none) Homo sapiens adaptor-related prote...   212   2e-53
BC010065_1(BC010065|pid:none) Homo sapiens adaptor-related prote...   212   2e-53
AB384738_1(AB384738|pid:none) Synthetic construct DNA, clone: pF...   212   2e-53
(O14617) RecName: Full=AP-3 complex subunit delta-1; AltName: Fu...   212   2e-53
AB015979_1(AB015979|pid:none) Bos taurus mRNA for adaptor relate...   210   8e-53
AK141789_1(AK141789|pid:none) Mus musculus 9 days embryo whole b...   210   1e-52
AK155518_1(AK155518|pid:none) Mus musculus NOD-derived CD11c +ve...   210   1e-52
(O54774) RecName: Full=AP-3 complex subunit delta-1; AltName: Fu...   210   1e-52
BC037477_1(BC037477|pid:none) Mus musculus adaptor-related prote...   210   1e-52
BC154680_1(BC154680|pid:none) Xenopus tropicalis adaptor-related...   208   4e-52

 psg: 0.59  gvh: 0.42  alm: 0.43  top: 0.53  tms: 0.00  mit: 0.25  mip: 0.00
 nuc: 0.06  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: cytoplasmic
	 32.0 %: nuclear
	 16.0 %: mitochondrial
	  8.0 %: vesicles of secretory system
	  4.0 %: cytoskeletal

>> prediction for CHN802 is cyt

>CHN802F.Seq
ATATTTTCTTCACCAAAAACTATTGAAAATGTTTGAAAGAACATTGGTTGACCTCATCAG
AGGTATTAGAAACCATAAAAAGAATGAAACTAAATTTATAAATCAATGTATAAATGAAAT
TAAAGAAGAATTAAAAGGTGATATGCAAAAAAAGACAGTTGCCGTCCAAAAATTAACATA
TATTCAAATGTTAGGATTTGATATTAGTTGGGCATCATTTAAAATTGTTGAAGTTATGAG
TTGTAATAAATTTTCATCAAAAAGAATTGGATATTTAGCAGCATCACAAAGTTTTAATGA
AGGAACAGATGTTATTGTATTGGCAACTCATCAAATTAGAAAGGATTTCTTATCATCGAA
TCAAAGTGAAGCCTATTTAGCATTGAATTGTCTTTCAAATATTTGTACAACCGATTTAGC
AAGAGAGTTGGCAAATGATATCCTAACATTATTGAGTACACAAAAAACACATATTTTAAA
GAGAGCCATCACGGTGTTATATAAGATATTCTTGAGATATCCAGAATCGCTAANNNNNNN
NNN

>CHN802Z.Seq
NNNNNNNNNNACCATCACATATTCAATCAGTTTACATGTTAAATTCATTAAAAGTTTTCT
CTCATGCTTGTGCAAAAGCAAACGGTGACAAAATCCCATCATTAGACGATGATGATGAGG
AAGAGGAAGCACAAGAAGAAGAGGACCAAAATGAAATCACTCATGAAATCGTTCAAGAAT
GTCTTGAAATTATTAAATCACGTTTAACAATTTTCACTCATAGTATTTACCTAAATGTAC
AAGAACGTGCTTGTCTTATTAATGAATTATTATCATTCTACACAGTCACTAAAGAACAAG
GTAATAATATTTCAAAGGAGTTAATTTCATTGTTCACAGAACAATTAAATCCAGTTGGTC
CAAAAGCTCAAAAGAAAGTACCAATTCCAGAAGGTTTAGATTTAGATGAATGGATTAATG
ATCCAAAACATCAAGAACCAATTGAAGAGGATGAAGATGATGATATTTTCAATACAAGTA
CATCTAGTCATCAAAAGAAACATCACAAACATCACCGTGGAGGATATGATGGTGATGATG
ATGAAGATGATGAAACCAATAGTTCTCATTCAGGTCATTCAAGTAGTAATTTCAATCGTC
ATCCAATTGATATTCAAAGACAAAAGGAAGAAAGATTAAGAAAACAAGCTAATAATCCAT
ATATGTTGGGTGGTAAAGTATCAAAGAAATTATCAACCAAGATCCTGAAAATATTCCAGG
GTTCAACTAACTGGGATTTAGGTCATCTTCATGTTGGTGCATCATCAAATAGACCAAGCC
ATCAAAAG

>CHN802P.Seq
ATATTTTCTTCACCAAAAACTATTGAAAATGTTTGAAAGAACATTGGTTGACCTCATCAG
AGGTATTAGAAACCATAAAAAGAATGAAACTAAATTTATAAATCAATGTATAAATGAAAT
TAAAGAAGAATTAAAAGGTGATATGCAAAAAAAGACAGTTGCCGTCCAAAAATTAACATA
TATTCAAATGTTAGGATTTGATATTAGTTGGGCATCATTTAAAATTGTTGAAGTTATGAG
TTGTAATAAATTTTCATCAAAAAGAATTGGATATTTAGCAGCATCACAAAGTTTTAATGA
AGGAACAGATGTTATTGTATTGGCAACTCATCAAATTAGAAAGGATTTCTTATCATCGAA
TCAAAGTGAAGCCTATTTAGCATTGAATTGTCTTTCAAATATTTGTACAACCGATTTAGC
AAGAGAGTTGGCAAATGATATCCTAACATTATTGAGTACACAAAAAACACATATTTTAAA
GAGAGCCATCACGGTGTTATATAAGATATTCTTGAGATATCCAGAATCGCTAA-------
---ACCATCACATATTCAATCAGTTTACATGTTAAATTCATTAAAAGTTTTCTCTCATGC
TTGTGCAAAAGCAAACGGTGACAAAATCCCATCATTAGACGATGATGATGAGGAAGAGGA
AGCACAAGAAGAAGAGGACCAAAATGAAATCACTCATGAAATCGTTCAAGAATGTCTTGA
AATTATTAAATCACGTTTAACAATTTTCACTCATAGTATTTACCTAAATGTACAAGAACG
TGCTTGTCTTATTAATGAATTATTATCATTCTACACAGTCACTAAAGAACAAGGTAATAA
TATTTCAAAGGAGTTAATTTCATTGTTCACAGAACAATTAAATCCAGTTGGTCCAAAAGC
TCAAAAGAAAGTACCAATTCCAGAAGGTTTAGATTTAGATGAATGGATTAATGATCCAAA
ACATCAAGAACCAATTGAAGAGGATGAAGATGATGATATTTTCAATACAAGTACATCTAG
TCATCAAAAGAAACATCACAAACATCACCGTGGAGGATATGATGGTGATGATGATGAAGA
TGATGAAACCAATAGTTCTCATTCAGGTCATTCAAGTAGTAATTTCAATCGTCATCCAAT
TGATATTCAAAGACAAAAGGAAGAAAGATTAAGAAAACAAGCTAATAATCCATATATGTT
GGGTGGTAAAGTATCAAAGAAATTATCAACCAAGATCCTGAAAATATTCCAGGGTTCAAC
TAACTGGGATTTAGGTCATCTTCATGTTGGTGCATCATCAAATAGACCAAGCCATCAAAA
G