>CHN511 (CHN511Q) /CSM/CH/CHN5-A/CHN511Q.Seq.d/
XXXXXXXXXXAGGTTATGGTGCAAGTGAAGGCTGTGGTGGTGATGCATGTAAAAGATTAG
ATGATGAATCAGTTGGTACAATTGGACCACCATTTGCAAGTAATGAAATTAAATTAGTTG
ATGTACCAGAGTTGGGTTATGATAGTAATGGTGAAGTACAAACTGGTGAAGTATGTCTTC
GTGGTCCAAGTATCTCAAGTGGTTATTATAAAGATGAGGAGAAAACTAGAGAAGAATTCA
AAGATGGTTGGTTCCATACTGGTGATATTGGTCGTTGGAATCGTGATGGTAGTCTTAGCA
TTGTTGATCGTAAGAAAAATATCTTTAAATTATCTCAAGGTGAATATGTTGCAGTTGAAA
AGATTGAAACAATAGTTGTAAAGAGTGAATACGTTGAACAAGTTTGTATTTATGGTGATT
CTCAAAAATCATGTGTAATTGCAATCATTCATCCACATCCAGAATCATGTAGTGAATGGG
CTGGTTCAAAGAAAACTGATAAAGACATTAAAGAAATTTGTAAAAATCAAGATTTTATCA
AAGTTGTATTGGATGATATAATTAAAAATTGCAAAAAATCTGGTCTTCATGGATTTG

---GYGASEGCGGDACKRLDDESVGTIGPPFASNEIKLVDVPELGYDSNGEVQTGEVCLR
GPSISSGYYKDEEKTREEFKDGWFHTGDIGRWNRDGSLSIVDRKKNIFKLSQGEYVAVEK
IETIVVKSEYVEQVCIYGDSQKSCVIAIIHPHPESCSEWAGSKKTDKDIKEICKNQDFIK
VVLDDIIKNCKKSGLHGF

Frame A:
---GYGASEGCGGDACKRLDDESVGTIGPPFASNEIKLVDVPELGYDSNGEVQTGEVCLR
GPSISSGYYKDEEKTREEFKDGWFHTGDIGRWNRDGSLSIVDRKKNIFKLSQGEYVAVEK
IETIVVKSEYVEQVCIYGDSQKSCVIAIIHPHPESCSEWAGSKKTDKDIKEICKNQDFIK
VVLDDIIKNCKKSGLHGF


Frame B:
---vmvqvkavvvmhvkd*mmnqlvqldhhlqvmkln*lmyqswvmivmvkyklvkyvfv
vqvsqvviikmrrkleknskmvgsilvilvvgivmvvlallivrkislnylkvnmlqlkr
lkq*l*rvntlnkfvfmvilknhv*lqsfihiqnhvvnglvqrkliktlkkfvkikilsk
lywmi*lkiaknlvfmdl


Frame C:
---lwck*rlww*cm*kir**iswynwttick**n*is*ctrvgl***w*stnw*smssw
skylkwll*r*gen*rriqrwlvpyw*ywsles*w*s*hc*s*ekyl*iisr*iccs*kd
*nnscke*ir*tslylw*fskimcncnhsstsrim**mgwfken**rh*rnl*ksrfyqs
cig*yn*klqkiwsswi

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHN511 (CHN511Q) /CSM/CH/CHN5-A/CHN511Q.Seq.d/                       1164   0.0
AHB382 (AHB382Q) /CSM/AH/AHB3-D/AHB382Q.Seq.d/                       1164   0.0
AFG590 (AFG590Q) /CSM/AF/AFG5-D/AFG590Q.Seq.d/                       1164   0.0
AFE482 (AFE482Q) /CSM/AF/AFE4-D/AFE482Q.Seq.d/                       1164   0.0
CHG452 (CHG452Q) /CSM/CH/CHG4-C/CHG452Q.Seq.d/                       1162   0.0
AHJ607 (AHJ607Q) /CSM/AH/AHJ6-A/AHJ607Q.Seq.d/                       1144   0.0
CHR758 (CHR758Q) /CSM/CH/CHR7-C/CHR758Q.Seq.d/                       1114   0.0
CFI593 (CFI593Q) /CSM/CF/CFI5-D/CFI593Q.Seq.d/                       1110   0.0
VFM341 (VFM341Q) /CSM/VF/VFM3-B/VFM341Q.Seq.d/                       1104   0.0
CHG651 (CHG651Q) /CSM/CH/CHG6-C/CHG651Q.Seq.d/                       1102   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AY196478|AY196478.1 Dictyostelium discoideum fatty acyl-CoA synthetase (fcsA) mRNA, complete cds.    82   3e-30  2
BQ875501|BQ875501.1 QGI8E20.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGI8E20, mRNA sequence.    62   3e-12  2
BQ870927|BQ870927.1 QGI10G21.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGI10G21, mRNA sequence.    62   4e-12  2
BU014148|BU014148.1 QGJ6J03.yg.ab1 QG_EFGHJ lettuce serriola Lactuca sativa cDNA clone QGJ6J03, mRNA sequence.    48   3e-08  2
AJ770328|AJ770328.1 Populus euphratica EST, clone P0001100010E05F1.    52   9e-07  2
AJ770266|AJ770266.1 Populus euphratica EST, clone P0001100009F07F1.    48   9e-07  2
CZ290149|CZ290149.1 cp68c03.r Candida parapsilosis Random Genomic Library Candida parapsilosis genomic clone cp68c03, genomic survey sequence.    52   1e-06  3
CV280626|CV280626.1 WS0137.B21_B09 PTxD-IL-FL-A-4 Populus balsamifera subsp. trichocarpa x Populus deltoides cDNA clone WS0137_B09 3', mRNA sequence.    44   3e-06  2
CV271705|CV271705.1 WS0155.B21_G24 PTxN-IB-A-6 Populus balsamifera subsp. trichocarpa x Populus nigra cDNA clone WS0155_G24 3', mRNA sequence.    44   3e-06  2
CV226271|CV226271.1 WS0163.B21_M14 PT-DX-A-7 Populus balsamifera subsp. trichocarpa cDNA clone WS0163_M14 3', mRNA sequence.    44   4e-06  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC077120_1(BC077120|pid:none) Danio rerio zgc:101071, mRNA (cDNA...   186   5e-46
(P33124) RecName: Full=Long-chain-fatty-acid--CoA ligase 6;     ...   180   3e-44
AL049876_1(AL049876|pid:none) Arabidopsis thaliana DNA chromosom...   178   1e-43
AF080118_2(AF080118|pid:none) Arabidopsis thaliana BAC F8M12.  &...   178   1e-43
BC046740_1(BC046740|pid:none) Xenopus laevis similar to fatty ac...   177   1e-43
BC076898_1(BC076898|pid:none) Xenopus tropicalis acyl-CoA synthe...   177   2e-43
AL596127_3(AL596127|pid:none) Mouse DNA sequence from clone RP23...   176   4e-43
AL596127_4(AL596127|pid:none) Mouse DNA sequence from clone RP23...   176   4e-43
AK122384_1(AK122384|pid:none) Mus musculus mRNA for mKIAA0837 pr...   176   4e-43
AK147421_1(AK147421|pid:none) Mus musculus adult male brain UNDE...   176   4e-43

 psg: 0.75  gvh: 0.32  alm: 0.46  top: 0.53  tms: 0.00  mit: 0.10  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: cytoplasmic
	 40.0 %: nuclear
	  8.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system

>> prediction for CHN511 is cyt

>CHN511Z.Seq
NNNNNNNNNNAGGTTATGGTGCAAGTGAAGGCTGTGGTGGTGATGCATGTAAAAGATTAG
ATGATGAATCAGTTGGTACAATTGGACCACCATTTGCAAGTAATGAAATTAAATTAGTTG
ATGTACCAGAGTTGGGTTATGATAGTAATGGTGAAGTACAAACTGGTGAAGTATGTCTTC
GTGGTCCAAGTATCTCAAGTGGTTATTATAAAGATGAGGAGAAAACTAGAGAAGAATTCA
AAGATGGTTGGTTCCATACTGGTGATATTGGTCGTTGGAATCGTGATGGTAGTCTTAGCA
TTGTTGATCGTAAGAAAAATATCTTTAAATTATCTCAAGGTGAATATGTTGCAGTTGAAA
AGATTGAAACAATAGTTGTAAAGAGTGAATACGTTGAACAAGTTTGTATTTATGGTGATT
CTCAAAAATCATGTGTAATTGCAATCATTCATCCACATCCAGAATCATGTAGTGAATGGG
CTGGTTCAAAGAAAACTGATAAAGACATTAAAGAAATTTGTAAAAATCAAGATTTTATCA
AAGTTGTATTGGATGATATAATTAAAAATTGCAAAAAATCTGGTCTTCATGGATTTG