>CHL545 (CHL545Q) /CSM/CH/CHL5-B/CHL545Q.Seq.d/
AACTCTCGAGTGCAAAAAAAGTAAAGTACAAAATGGTTAATTTCACAATCGATCAAATTC
GTGCCATTATGGACCGTCGTGAAAATATCAGTAATATGTCTGTTATTGCTCATGTCGATC
ACGGTAAAACCACTTTATCAGATTCTTTAATCCAAAGAGCTGGTATTATTGCCGATAAAG
TTTCTGGTGATATGAGATATATGTCATGTCGTGCTGATGAACAAGANCGTGGTATCACCA
TTAAATCTTCATCCGTATCACTTCACTTCGAAATGCCAAAGGAAGACAAATTACCAGCTG
GTTGTACTTCACACGAATTTTTAATCAATCTTATCGATTCCCCAGGTCACGTTGATTTCA
GTTCAGAAGTAACTGCTGCCCTCCGTGTTACTGATGGTGCTTTANTCGTTATCGATTGCG
TCGAAAGTGTTTGCGTACAAACCGAAACTGTATTACGTCAAGCCGTCGCTGAACGTATCA
AACCAGTCTTATTCGTCAACAAAGTCGATCGTTTCTTATTAGAACTCCAATTAAACACTG
AAGAAGCTTATCTCTCTTTCCGTAAAGCTATTGAATCCGTCAXXXXXXXXXX

LSSAKKVKYKMVNFTIDQIRAIMDRRENISNMSVIAHVDHGKTTLSDSLIQRAGIIADKV
SGDMRYMSCRADEQXRGITIKSSSVSLHFEMPKEDKLPAGCTSHEFLINLIDSPGHVDFS
SEVTAALRVTDGALXVIDCVESVCVQTETVLRQAVAERIKPVLFVNKVDRFLLELQLNTE
EAYLSFRKAIESV---

Frame A:
nsrvqkk*stkwlisqsikfvplwtvvkisvicllllmsitvkplyqil*skelvllpik
flvi*dichvvlmnkxvvsplnlhpyhftskcqrktnyqlvvlhtnf*silsipqvtlis
vqk*llpsvllmvlxslsiaskvfaykpklyyvkpslnvsnqsysstksivsy*nsn*tl
kklislsvkllnp---


Frame B:
tleckkskvqng*fhnrsnschygps*kyq*yvcycscrsr*nhfirffnpkswyycr*s
fw*yeiyvmsc**trxwyhh*ifiritslrnakgrqitswlyftrifnqsyrfprsr*fq
frsnccppcy*wcfxryrlrrkclrtnrncitssrr*tyqtslirqqsrsflirtpikh*
rslslfp*sy*ir---


Frame C:
LSSAKKVKYKMVNFTIDQIRAIMDRRENISNMSVIAHVDHGKTTLSDSLIQRAGIIADKV
SGDMRYMSCRADEQXRGITIKSSSVSLHFEMPKEDKLPAGCTSHEFLINLIDSPGHVDFS
SEVTAALRVTDGALXVIDCVESVCVQTETVLRQAVAERIKPVLFVNKVDRFLLELQLNTE
EAYLSFRKAIESV---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHL545 (CHL545Q) /CSM/CH/CHL5-B/CHL545Q.Seq.d/                       1102   0.0
CHL163 (CHL163Q) /CSM/CH/CHL1-C/CHL163Q.Seq.d/                       1074   0.0
VHP344 (VHP344Q) /CSM/VH/VHP3-B/VHP344Q.Seq.d/                       1072   0.0
VHO639 (VHO639Q) /CSM/VH/VHO6-B/VHO639Q.Seq.d/                       1072   0.0
VHN112 (VHN112Q) /CSM/VH/VHN1-A/VHN112Q.Seq.d/                       1072   0.0
VHH710 (VHH710Q) /CSM/VH/VHH7-A/VHH710Q.Seq.d/                       1072   0.0
VHD692 (VHD692Q) /CSM/VH/VHD6-D/VHD692Q.Seq.d/                       1072   0.0
VHP874 (VHP874Q) /CSM/modify/h12/F/treated/VHP874Q.Seq.d/            1070   0.0
VHH874 (VHH874Q) /CSM/VH/VHH8-D/VHH874Q.Seq.d/                       1070   0.0
VHG874 (VHG874Q) /CSM/VH/VHG8-D/VHG874Q.Seq.d/                       1070   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

M26017|M26017.1 D.discoideum elongation factor 2 mRNA, complete cds.  1068   0.0    1
CR382139|CR382139.1 Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii.    88   4e-24  2
BE579584|BE579584.1 kq31a10.y1 TBN95TM-SSR Strongyloides stercoralis cDNA 5' similar to WP:F25H5.4 CE15900 EFT-2: ELONGATION FACTOR 2 ;, mRNA sequence.    58   2e-22  4
CD421543|CD421543.1 ku85f05.y1 Strongyloides ratti PA female naive pAMP1 v1 Strongyloides ratti cDNA 5' similar to SW:EF2_CAEEL P29691 ELONGATION FACTOR 2 ;, mRNA sequence.    52   5e-22  4
BI742454|BI742454.1 kt51b05.y4 Strongyloides ratti L1 pAMP1 v3 Chiapelli McCarter Strongyloides ratti cDNA 5' similar to SW:EF2_CAEEL P29691 ELONGATION FACTOR 2 ;, mRNA sequence.    52   1e-21  4
AF240831|AF240831.1 Tanystylum orbiculare elongation factor-2 mRNA, partial cds.   105   2e-21  2
AF107286|AF107286.1 Candida albicans elongation factor 2 (EFT2) gene, partial cds.    80   2e-21  3
CN594093|CN594093.1 TTE00007728 Normalized large Tetrahymena thermophila cDNA, mRNA sequence.    70   6e-21  2
Y09664|Y09664.1 C.albicans EFT2 gene.                              80   8e-21  3
CK445967| translation elongation factor 2 (EF-2); Eft2p [Saccharomyces, mRNA sequence.    80   1e-20  3

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM270011_29(AM270011|pid:none) Aspergillus niger contig An02c016...   248   8e-65
AF083031_87(AF083031|pid:none) Guillardia theta nucleomorph chro...   243   3e-63
AF248644_1(AF248644|pid:none) Filobasidiella neoformans var. neo...   243   3e-63
DQ357217_1(DQ357217|pid:none) Leishmania braziliensis elongation...   241   1e-62
AM494972_26(AM494972|pid:none) Leishmania braziliensis chromosom...   241   1e-62
AY026074_1(AY026074|pid:none) Monosiga brevicollis elongation fa...   241   1e-62
AY618550_1(AY618550|pid:none) Trypanosoma cruzi elongation facto...   241   1e-62
CT005272_19(CT005272|pid:none) Leishmania major strain Friedlin,...   241   1e-62
(Q6FYA7) RecName: Full=Elongation factor 2;          Short=EF-2;...   240   2e-62
(Q874B9) RecName: Full=Elongation factor 2;          Short=EF-2;...   239   3e-62

 psg: 0.71  gvh: 0.38  alm: 0.39  top: 0.53  tms: 0.00  mit: 0.30  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: cytoplasmic
	 28.0 %: nuclear
	 16.0 %: mitochondrial
	  4.0 %: vesicles of secretory system

>> prediction for CHL545 is cyt

>CHL545F.Seq
AACTCTCGAGTGCAAAAAAAGTAAAGTACAAAATGGTTAATTTCACAATCGATCAAATTC
GTGCCATTATGGACCGTCGTGAAAATATCAGTAATATGTCTGTTATTGCTCATGTCGATC
ACGGTAAAACCACTTTATCAGATTCTTTAATCCAAAGAGCTGGTATTATTGCCGATAAAG
TTTCTGGTGATATGAGATATATGTCATGTCGTGCTGATGAACAAGANCGTGGTATCACCA
TTAAATCTTCATCCGTATCACTTCACTTCGAAATGCCAAAGGAAGACAAATTACCAGCTG
GTTGTACTTCACACGAATTTTTAATCAATCTTATCGATTCCCCAGGTCACGTTGATTTCA
GTTCAGAAGTAACTGCTGCCCTCCGTGTTACTGATGGTGCTTTANTCGTTATCGATTGCG
TCGAAAGTGTTTGCGTACAAACCGAAACTGTATTACGTCAAGCCGTCGCTGAACGTATCA
AACCAGTCTTATTCGTCAACAAAGTCGATCGTTTCTTATTAGAACTCCAATTAAACACTG
AAGAAGCTTATCTCTCTTTCCGTAAAGCTATTGAATCCGTCANNNNNNNNNN