>CHK796 (CHK796Q) /CSM/CH/CHK7-D/CHK796Q.Seq.d/
AATAAAAATAAAATAAAATAAATAATAATAATAATAATAAATTAAATTAAATAAATAAAT
AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT
AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT
AAATAANCGANCAANCAANCAANCAAAAAAAAAAAXXXXXXXXXX

ikik*nk******iklnk*ink*ink*ink*ink*ink*ink*ink*ink*ink*ink*I
NXRXXXQXKKK---

Frame A:
nknkik*iiiiiin*ik*ink*ink*ink*ink*ink*ink*ink*ink*ink*ink*in
k*xxxqxxkkk---


Frame B:
ikik*nk******iklnk*ink*ink*ink*ink*ink*ink*ink*ink*ink*ink*I
NXRXXXQXKKK---


Frame C:
*k*nkinnnnnnkln*ink*ink*ink*ink*ink*ink*ink*ink*ink*ink*ink*
ixxqxxxqkk---

 ***** No hits found ******

Lambda     K      H
    1.37    0.711     1.31

Gapped
Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 0
Number of Sequences: 97611
Number of extensions: 0
Number of successful extensions: 0
Number of sequences better than 10.0: 0
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 0
length of query: 225
length of database: 80,480,566
effective HSP length: 17
effective length of query: 208
effective length of database: 78,821,179
effective search space: 16394805232
effective search space used: 16394805232
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)

 ***** No hits found ******

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Hits to DB: 0
Number of Sequences: 42533465
Number of extensions: 0
Number of successful extensions: 0
Number of sequences better than 10.0: 0
length of query: 225
length of database: ^,551,261,559
effective HSP length: 22
effective length of query: 203
effective length of database: ],615,525,329
effective search space: 9259951641787
effective search space used: 9259951641787
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
[blastall] WARNING:  [000.000]  1108466719.dictycdb.dna: Blast: No valid letters to be indexed on context 0

ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL844504_88(AL844504|pid:none) Plasmodium falciparum strain 3D7,...    47   2e-04
AF416700_2(AF416700|pid:none) Empedobacter brevis metallo-beta-l...    41   0.014
AL844507_12(AL844507|pid:none) Plasmodium falciparum 3D7 chromos...    35   0.59

 psg: 0.75  gvh: 0.69  alm: 0.18  top: 0.47  tms: 0.20  mit: 0.32  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 1.00  m3b: 0.00  m_ : 0.00 

	 28.0 %: mitochondrial
	 28.0 %: endoplasmic reticulum
	 20.0 %: plasma membrane
	  8.0 %: extracellular, including cell wall
	  4.0 %: vacuolar
	  4.0 %: Golgi
	  4.0 %: nuclear
	  4.0 %: vesicles of secretory system

>> prediction for CHK796 is mit

>CHK796F.Seq
AATAAAAATAAAATAAAATAAATAATAATAATAATAATAAATTAAATTAAATAAATAAAT
AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT
AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT
AAATAANCGANCAANCAANCAANCAAAAAAAAAAANNNNNNNNNN