>CHI575 (CHI575Q) /CSM/CH/CHI5-D/CHI575Q.Seq.d/
GTGTGATTGTGTTGTGTGTGTATTTTGGTTGATACACATTATATATATATATAATACAAT
AAAATGTCATTTTTTTTAGGACAGATTTTAGAAAAGATGGGTTCCATCGATAAAGATATT
AGATTCATGGCAACTCATGATCTTGCAAATGAATTAGAAAAAGATACTTTTAAAATGGAT
CCAACTTATGAAAATAAAATTGTTACAAAATTATTAGCATTAACAGCTGATTCAGCAAAT
AATGTTCAAGGAAATGTTGTTAAATGTTTAGGTTTATTAATTAAAAGAGTTAAAGATTCA
CAAGCAACAGAAATTATTGATACATTATCAAAAAATATTTTAGAAGAATCAAATAAAGAA
GAATTAGTTGAAATTTCAGGTATTGGTTTAAAAACAATCATTACAAATTTACCAAGTGAA
GGTAGTTCAATTTCAACTTTAGTAATTAAAAATTTAGTACCAAAATTATTAATTGGTATT
GATAGTGAAAAATTAAAAGATAAAAATGAAATTAAAATGTCATGTTTAGATATTTTAAAT
GATTTATTACAAAAGTATGGATCATTTATGATTGGAGATTTAGAGAATATTCAAAAGGTA
GTATTACCAAAATTGAATGCAACTXXXXXXXXXX

v*lccvcilvdthyiyi*YNKMSFFLGQILEKMGSIDKDIRFMATHDLANELEKDTFKMD
PTYENKIVTKLLALTADSANNVQGNVVKCLGLLIKRVKDSQATEIIDTLSKNILEESNKE
ELVEISGIGLKTIITNLPSEGSSISTLVIKNLVPKLLIGIDSEKLKDKNEIKMSCLDILN
DLLQKYGSFMIGDLENIQKVVLPKLNA---

Frame A:
v*lccvcilvdthyiyi*YNKMSFFLGQILEKMGSIDKDIRFMATHDLANELEKDTFKMD
PTYENKIVTKLLALTADSANNVQGNVVKCLGLLIKRVKDSQATEIIDTLSKNILEESNKE
ELVEISGIGLKTIITNLPSEGSSISTLVIKNLVPKLLIGIDSEKLKDKNEIKMSCLDILN
DLLQKYGSFMIGDLENIQKVVLPKLNA---


Frame B:
cdcvvcvfwlihiiyiyntikchff*drf*krwvpsikildswqlmilqmn*kkillkwi
qlmkikllqny*h*qliqqimfkemllnv*vy*lkelkihkqqkllihyqkif*knqikk
n*lkfqvlv*kqslqiyqvkvvqfql**lki*yqny*lvlivkn*kikmklkchv*if*m
iyyksmdhl*lei*rifkr*yyqn*mq---


Frame C:
vivlcvyfg*ytlyiyiiq*nviffrtdfrkdgfhr*ry*ihgns*sck*irkryf*ngs
nl*k*ncykiisins*fsk*csrkcc*mfrfin*ks*rftsnrny*yiikkyfrrik*rr
is*nfrywfknnhykftk*r*fnfnfsn*kfstkiinwy***kikr*k*n*nvmfryfk*
fitkvwiiydwrfreyskgsitkiecn---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHI575 (CHI575Q) /CSM/CH/CHI5-D/CHI575Q.Seq.d/                        759   0.0
VHP493 (VHP493Q) /CSM/VH/VHP4-D/VHP493Q.Seq.d/                        751   0.0
VHO482 (VHO482Q) /CSM/VH/VHO4-D/VHO482Q.Seq.d/                        751   0.0
VHH480 (VHH480Q) /CSM/VH/VHH4-D/VHH480Q.Seq.d/                        751   0.0
VHE607 (VHE607Q) /CSM/VH/VHE6-A/VHE607Q.Seq.d/                        751   0.0
VHD369 (VHD369Q) /CSM/VH/VHD3-C/VHD369Q.Seq.d/                        751   0.0
VHB750 (VHB750Q) /CSM/VH/VHB7-C/VHB750Q.Seq.d/                        751   0.0
SHL726 (SHL726Q) /CSM/SH/SHL7-B/SHL726Q.Seq.d/                        751   0.0
SHK714 (SHK714Q) /CSM/SH/SHK7-A/SHK714Q.Seq.d/                        751   0.0
SHK667 (SHK667Q) /CSM/SH/SHK6-C/SHK667Q.Seq.d/                        751   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC116956|AC116956.2 Dictyostelium discoideum chromosome 2 map 1418423-1684967 strain AX4, complete sequence.   387   0.0    13
BA000026|BA000026.2 Mycoplasma penetrans HF-2 DNA, complete genome.    36   1e-12  31
AE017263|AE017263.1 Mesoplasma florum L1 complete genome.          36   4e-11  24
BD061520|BD061520.1 Genome DNA of symbiotic bacteria of aphid.     36   7e-10  21
AR409405|AR409405.1 Sequence 1 from patent US 6632935.             36   7e-10  21
AP006628|AP006628.1 Onion yellows phytoplasma OY-M DNA, complete genome.    34   5e-07  24
BX571856|BX571856.1 Staphylococcus aureus subsp. aureus strain MRSA252, complete genome.    38   6e-07  28
BX842642|BX842642.1 Mycoplasma mycoides subsp. mycoides SC genomic DNA, complete  sequence; segment 1/4.    34   8e-07  14
BA000016|BA000016.3 Clostridium perfringens str. 13 DNA, complete genome.    38   1e-06  30
BX842643|BX842643.1 Mycoplasma mycoides subsp. mycoides SC genomic DNA, complete  sequence; segment 2/4.    40   1e-06  15

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q86KD1) RecName: Full=Cullin-associated NEDD8-dissociated prote...   356   3e-97
AE014134_1928(AE014134|pid:none) Drosophila melanogaster chromos...   136   4e-31
BT023510_1(BT023510|pid:none) Drosophila melanogaster LD09533 fu...   136   4e-31
BC071146_1(BC071146|pid:none) Xenopus laevis MGC83065 protein, m...   133   4e-30
(Q6ZQ38) RecName: Full=Cullin-associated NEDD8-dissociated prote...   133   5e-30
AK144869_1(AK144869|pid:none) Mus musculus lung RCB-0558 LLC cDN...   133   5e-30
AK129225_1(AK129225|pid:none) Mus musculus mRNA for mKIAA0829 pr...   133   5e-30
AB020636_1(AB020636|pid:none) Homo sapiens mRNA for KIAA0829 pro...   133   5e-30
AK292456_1(AK292456|pid:none) Homo sapiens cDNA FLJ77762 complet...   133   5e-30
(A7MBJ5) RecName: Full=Cullin-associated NEDD8-dissociated prote...   133   5e-30

 psg: 0.90  gvh: 0.44  alm: 0.36  top: 0.40  tms: 0.00  mit: 0.16  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 28.0 %: nuclear
	 20.0 %: cytoskeletal
	  4.0 %: vacuolar
	  4.0 %: peroxisomal

>> prediction for CHI575 is cyt

>CHI575F.Seq
GTGTGATTGTGTTGTGTGTGTATTTTGGTTGATACACATTATATATATATATAATACAAT
AAAATGTCATTTTTTTTAGGACAGATTTTAGAAAAGATGGGTTCCATCGATAAAGATATT
AGATTCATGGCAACTCATGATCTTGCAAATGAATTAGAAAAAGATACTTTTAAAATGGAT
CCAACTTATGAAAATAAAATTGTTACAAAATTATTAGCATTAACAGCTGATTCAGCAAAT
AATGTTCAAGGAAATGTTGTTAAATGTTTAGGTTTATTAATTAAAAGAGTTAAAGATTCA
CAAGCAACAGAAATTATTGATACATTATCAAAAAATATTTTAGAAGAATCAAATAAAGAA
GAATTAGTTGAAATTTCAGGTATTGGTTTAAAAACAATCATTACAAATTTACCAAGTGAA
GGTAGTTCAATTTCAACTTTAGTAATTAAAAATTTAGTACCAAAATTATTAATTGGTATT
GATAGTGAAAAATTAAAAGATAAAAATGAAATTAAAATGTCATGTTTAGATATTTTAAAT
GATTTATTACAAAAGTATGGATCATTTATGATTGGAGATTTAGAGAATATTCAAAAGGTA
GTATTACCAAAATTGAATGCAACTNNNNNNNNNN