>CHI419 (CHI419Q) /CSM/CH/CHI4-A/CHI419Q.Seq.d/
XXXXXXXXXXTGGTTCCCATAAGAAACGTCACTGGCAATTACACCCAGAACATTGTGGCG
GACGTCCAAATAAGATTAAAGTCATCTGTGTTCCATCACCAAAAGGTACTTGCAAGACTG
TTCAATGTCCAAAAGGTTACAAATGCAAACTCTATGCTGATGGTCCAACATGTGTAAAGA
TTGAAAAACCAAAATGTCTCACTTGTAAAGATATGCATTGTGAGTCAAATGGATTACTCT
GTGTCTTGACTCCACAAAAGAAGACTGATGAAGAATGTTGTCCAATTATTCCAATCTGTA
TCAATCCATCAACTATTGCCGCATCCACTATTGCCACTACAACTGCATCAACTCGTCACT
CAACTGCCTCAACAATTGCCTCATTAGTCACTGGTACCACAAGTGGTGGTGGTGGTATGG
GTTCATTTGGTGGTCGATCCGATGAAGAATCAAGTGATCCAAATGCTATACTTGGTCTCT
TTGAAGACGATATTTTCTGGGGTGATAATGATGAATACTTTAGTGATAACTACCGTTATG
TTGATGAAGNAGATATTGATGAAGNTTTCAATGGTAATGATGAATTG

---GSHKKRHWQLHPEHCGGRPNKIKVICVPSPKGTCKTVQCPKGYKCKLYADGPTCVKI
EKPKCLTCKDMHCESNGLLCVLTPQKKTDEECCPIIPICINPSTIAASTIATTTASTRHS
TASTIASLVTGTTSGGGGMGSFGGRSDEESSDPNAILGLFEDDIFWGDNDEYFSDNYRYV
DEXDIDEXFNGNDEL

Frame A:
---GSHKKRHWQLHPEHCGGRPNKIKVICVPSPKGTCKTVQCPKGYKCKLYADGPTCVKI
EKPKCLTCKDMHCESNGLLCVLTPQKKTDEECCPIIPICINPSTIAASTIATTTASTRHS
TASTIASLVTGTTSGGGGMGSFGGRSDEESSDPNAILGLFEDDIFWGDNDEYFSDNYRYV
DEXDIDEXFNGNDEL


Frame B:
---vpirnvtgnytqnivadvqirlkssvfhhqkvlarlfnvqkvtnansmlmvqhv*rl
knqnvslvkicivsqmdysvs*lhkrrlmknvvqlfqsvsihqllphpllplqlhqlvtq
lpqqlph*slvpqvvvvvwvhlvvdpmknqviqmlylvslktifsgvimmntlvittvml
mkxilmkxsmvmmn


Frame C:
---fp*etslaitprtlwrtsk*d*shlcsitkrylqdcsmskrlqmqtlc*wsnmckd*
ktkmshl*ryal*vkwitlcldstked**rmlsnysnlyqsinycrihychyncinssln
clnnclishwyhkwwwwygfiwwsir*rik*skcytwsl*rryflg****il***lplc*
*xry**xfqw***i

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHI419 (CHI419Q) /CSM/CH/CHI4-A/CHI419Q.Seq.d/                       1132   0.0
SFI483 (SFI483Q) /CSM/SF/SFI4-D/SFI483Q.Seq.d/                       1126   0.0
SSC714 (SSC714Q) /CSM/SS/SSC7-A/SSC714Q.Seq.d/                       1122   0.0
SHA271 (SHA271Q) /CSM/SH/SHA2-C/SHA271Q.Seq.d/                       1122   0.0
SFE688 (SFE688Q) /CSM/SF/SFE6-D/SFE688Q.Seq.d/                       1122   0.0
CHS349 (CHS349Q) /CSM/CH/CHS3-C/CHS349Q.Seq.d/                       1122   0.0
AHF640 (AHF640Q) /CSM/AH/AHF6-B/AHF640Q.Seq.d/                       1122   0.0
SHG454 (SHG454Q) /CSM/SH/SHG4-C/SHG454Q.Seq.d/                       1116   0.0
CHM718 (CHM718Q) /CSM/CH/CHM7-A/CHM718Q.Seq.d/                       1116   0.0
CFF409 (CFF409Q) /CSM/CF/CFF4-A/CFF409Q.Seq.d/                       1116   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC115584|AC115584.2 Dictyostelium discoideum chromosome 2 map complement(3622543-3568102) strain AX4, complete sequence.  1130   0.0    1
M26238|M26238.1 D.discoideum spore coat protein SP70 gene, complete cds.  1104   0.0    2
AC116956|AC116956.2 Dictyostelium discoideum chromosome 2 map 1418423-1684967 strain AX4, complete sequence.    38   0.024  10
BD454036|BD454036.1 NOVEL DNA POLYMERASE III HOLOENZYME DELTA SUBUNIT NUCLEIC ACID MOLECULES AND PROTEINS.    40   1.5    2
BD454035|BD454035.1 NOVEL DNA POLYMERASE III HOLOENZYME DELTA SUBUNIT NUCLEIC ACID MOLECULES AND PROTEINS.    40   1.5    2
CQ328733|CQ328733.1 Sequence 2827 from Patent WO0157275.           26   1.5    4
CQ254590|CQ254590.1 Sequence 2851 from Patent WO0157277.           26   1.5    4
CQ216033|CQ216033.1 Sequence 2872 from Patent WO0157273.           26   1.5    4
CQ200507|CQ200507.1 Sequence 2784 from Patent WO0157271.           26   1.5    4
CQ171398|CQ171398.1 Sequence 2794 from Patent WO0157274.           26   1.5    4

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P15269) RecName: Full=Spore coat protein SP70; AltName: Full=Pr...   283   2e-75
S07638(S07638;A60942;B60942) spore coat protein SP96 precursor -...    60   6e-08
(P14328) RecName: Full=Spore coat protein SP96;  &AC117075_49(AC...    60   6e-08
(Q54QX2) RecName: Full=Probable spore coat protein DDB_G0283555;...    50   4e-05
(Q04503) RecName: Full=Prespore protein Dp87; Flags: Precursor;        49   1e-04
D13973_1(D13973|pid:none) Dictyostelium discoideum gene for Dp87...    49   1e-04
AC117267_7(AC117267|pid:none) Dictyostelium discoideum chromosom...    44   0.004
S72639_1(S72639|pid:none) PspB=prespore-specific gene {5' region...    41   0.020
(P54704) RecName: Full=Spore coat protein SP85; AltName: Full=Ce...    41   0.020
T22274(T22274)hypothetical protein F46B3.9 - Caenorhabditis eleg...    40   0.046

 psg: 0.58  gvh: 0.35  alm: 0.37  top: 0.53  tms: 0.00  mit: 0.20  mip: 0.04
 nuc: 0.05  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 32.0 %: nuclear
	  8.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system

>> prediction for CHI419 is cyt

>CHI419Z.Seq
NNNNNNNNNNTGGTTCCCATAAGAAACGTCACTGGCAATTACACCCAGAACATTGTGGCG
GACGTCCAAATAAGATTAAAGTCATCTGTGTTCCATCACCAAAAGGTACTTGCAAGACTG
TTCAATGTCCAAAAGGTTACAAATGCAAACTCTATGCTGATGGTCCAACATGTGTAAAGA
TTGAAAAACCAAAATGTCTCACTTGTAAAGATATGCATTGTGAGTCAAATGGATTACTCT
GTGTCTTGACTCCACAAAAGAAGACTGATGAAGAATGTTGTCCAATTATTCCAATCTGTA
TCAATCCATCAACTATTGCCGCATCCACTATTGCCACTACAACTGCATCAACTCGTCACT
CAACTGCCTCAACAATTGCCTCATTAGTCACTGGTACCACAAGTGGTGGTGGTGGTATGG
GTTCATTTGGTGGTCGATCCGATGAAGAATCAAGTGATCCAAATGCTATACTTGGTCTCT
TTGAAGACGATATTTTCTGGGGTGATAATGATGAATACTTTAGTGATAACTACCGTTATG
TTGATGAAGNAGATATTGATGAAGNTTTCAATGGTAATGATGAATTG