>AFG193 (AFG193Q) /CSM/AF/AFG1-D/AFG193Q.Seq.d/
XXXXXXXXXXTCATTGGAATCTGAAAAGGTCTCACGTGAACNATTAATCAAACANAAGGA
TCGACTCAATAGTTTATTGGCATCATTAGAGTCCGAAGGTGCTGAACGTGAAAAGAGACT
TCGTGAATTGGAAGCCAAACTCGATGAAACCTTAAAGAACTTGGAATTAGAGAAATTGGC
TCGTATGGAACTCGAAGCAAGATTAGCCAAGACCGAAAAGGATAGAGCTATCTTGGAATT
GAAATTAGCTGAAGCCATCGATGAAAAATCAAAACTCGAACAACAAATCGAAGCCACCAG
AATCAGAGGTGCTGCTGAAGCTCAAGGTCTTGGTCTCTTAAGAAAGAACCTCGACACTCA
CGTTCACGATTTACTCAAATGGCAAAAGTTAACAATGGAAAACTCTTCCTCATCCTCTAT
CGATGACCNAATCNT

---LESEKVSREXLIKXKDRLNSLLASLESEGAEREKRLRELEAKLDETLKNLELEKLAR
MELEARLAKTEKDRAILELKLAEAIDEKSKLEQQIEATRIRGAAEAQGLGLLRKNLDTHV
HDLLKWQKLTMENSSSSSIDDXI

Frame A:
---hwnlkrshvnx*snxridsivywhh*spkvlnvkrdfvnwkpnsmkp*rtwn*rnwl
vwnskqd*prpkrielswn*n*lkpsmknqnsnnkskppesevllklkvlvs*ertstlt
ftiysngks*qwktlphplsmtxs


Frame B:
---igi*kglt*tinqtxgstq*figiirvrrc*t*kets*igsqtr*nlkelgireigs
ygtrskisqdrkg*sylgieis*shr*kiktrttnrshqnqrcc*ssrswslkkeprhsr
srftqmakvnngklflilyr*pnx


Frame C:
---LESEKVSREXLIKXKDRLNSLLASLESEGAEREKRLRELEAKLDETLKNLELEKLAR
MELEARLAKTEKDRAILELKLAEAIDEKSKLEQQIEATRIRGAAEAQGLGLLRKNLDTHV
HDLLKWQKLTMENSSSSSIDDXI

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AFG193 (AFG193Q) /CSM/AF/AFG1-D/AFG193Q.Seq.d/                        821   0.0
VSJ276 (VSJ276Q) /CSM/VS/VSJ2-D/VSJ276Q.Seq.d/                        813   0.0
VSB491 (VSB491Q) /CSM/VS/VSB4-D/VSB491Q.Seq.d/                        813   0.0
VFJ634 (VFJ634Q) /CSM/VF/VFJ6-B/VFJ634Q.Seq.d/                        813   0.0
VFD762 (VFD762Q) /CSM/VF/VFD7-C/VFD762Q.Seq.d/                        813   0.0
VFA811 (VFA811Q) /CSM/VF/VFA8-A/VFA811Q.Seq.d/                        813   0.0
SSF572 (SSF572Q) /CSM/SS/SSF5-C/SSF572Q.Seq.d/                        813   0.0
SLE631 (SLE631Q) /CSM/SL/SLE6-B/SLE631Q.Seq.d/                        813   0.0
SFH329 (SFH329Q) /CSM/SF/SFH3-B/SFH329Q.Seq.d/                        813   0.0
SFH314 (SFH314Q) /CSM/SF/SFH3-A/SFH314Q.Seq.d/                        813   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

L49527|L49527.1 Dictyostelium discoideum cortexillin I mRNA, complete cds.   813   0.0    1
AX430298|AX430298.1 Sequence 80 from Patent WO0240715.             36   0.081  2
AR448144|AR448144.1 Sequence 822 from patent US 6673549.           36   0.081  2
AE003695|AE003695.2 Drosophila melanogaster chromosome 3R, section 33 of 118 of the complete sequence.    32   0.83   2
AC009741|AC009741.5 Drosophila melanogaster, chromosome 3R, region 87B-87B, BAC clone BACR44K17, complete sequence.    32   0.84   2
AC017240|AC017240.1 Drosophila melanogaster, WORKING DRAFT SEQUENCE, in ordered pieces.    32   0.86   2
CQ614498|CQ614498.1 Sequence 42256 from Patent WO0171042.          32   1.0    2
CQ598157|CQ598157.1 Sequence 25915 from Patent WO0171042.          32   1.0    2
CQ614501|CQ614501.1 Sequence 42259 from Patent WO0171042.          32   1.0    2
CQ614499|CQ614499.1 Sequence 42257 from Patent WO0171042.          32   1.1    2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q9Y0T4) RecName: Full=Cortexillin-1; AltName: Full=Cortexillin ...   166   3e-40
(Q66H60) RecName: Full=Coiled-coil domain-containing protein 146...    39   0.053
AF324061_1(AF324061|pid:none) Streptococcus pyogenes IgG Fc rece...    37   0.20
AF007557_1(AF007557|pid:none) Streptococcus pyogenes Mrp22 gene,...    37   0.20
X78483_2(X78483|pid:none) S.pyogenes (isolate 71-686) FcrA13 gen...    37   0.20
A33939(A33939) Fc gamma (IgG) receptor II precursor - Streptococ...    37   0.20
CP000056_1698(CP000056|pid:none) Streptococcus pyogenes MGAS6180...    37   0.20
AB210007_1(AB210007|pid:none) Homo sapiens mRNA for NUMA1 varian...    37   0.26
BC013023_1(BC013023|pid:none) Homo sapiens nuclear mitotic appar...    37   0.26
A42184(A42184;S33376;S55331;S23647;S24554) nuclear mitotic appar...    37   0.26

 psg: 0.75  gvh: 0.56  alm: 0.57  top: 0.53  tms: 0.00  mit: 0.16  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: cytoplasmic
	 24.0 %: nuclear
	 16.0 %: cytoskeletal
	 12.0 %: mitochondrial
	  4.0 %: Golgi
	  4.0 %: vacuolar

>> prediction for AFG193 is cyt

>AFG193Z.Seq
----------TCATTGGAATCTGAAAAGGTCTCACGTGAACNATTAATCAAACANAAGGA
TCGACTCAATAGTTTATTGGCATCATTAGAGTCCGAAGGTGCTGAACGTGAAAAGAGACT
TCGTGAATTGGAAGCCAAACTCGATGAAACCTTAAAGAACTTGGAATTAGAGAAATTGGC
TCGTATGGAACTCGAAGCAAGATTAGCCAAGACCGAAAAGGATAGAGCTATCTTGGAATT
GAAATTAGCTGAAGCCATCGATGAAAAATCAAAACTCGAACAACAAATCGAAGCCACCAG
AATCAGAGGTGCTGCTGAAGCTCAAGGTCTTGGTCTCTTAAGAAAGAACCTCGACACTCA
CGTTCACGATTTACTCAAATGGCAAAAGTTAACAATGGAAAACTCTTCCTCATCCTCTAT
CGATGACCNAATCNT