>CHG241 (CHG241Q) /CSM/CH/CHG2-B/CHG241Q.Seq.d/
CTGGGGATAGTGATGTTATATTACAATCGTTAGCGGTAACATGTTTATTATCATTGTTAA
ACTCAAAGTATGGTATAGAGAAAGCGATAGCAACACCCAATTCAATGATTAGGTTAATCA
CATCAATGGATACACCAAAAGCGGATACAAGATCGAGTGTATTTGAAATATTGACAGCGA
TATGTATGATCTCAGAGAAAGGTTATCAATTGATTCTAGAGGCAATGACACACTTTAAAC
AAGTTCGTAAGGAACGTTTTAGATTTACATTTTTAGTGGAATCAATGAAGAAAGTAATGA
ATTCATCAGATAAGGAGTATTTAACAACTTGTTTAACTTTGGTCAATGGTATTGTAAATT
CATCAGAGGAAATCGATGAACGTATTCAATTGAGAACTGAGTTTACAAGATTGGGATTGG
ATGAGGTAAXXXXXXXXXX

GDSDVILQSLAVTCLLSLLNSKYGIEKAIATPNSMIRLITSMDTPKADTRSSVFEILTAI
CMISEKGYQLILEAMTHFKQVRKERFRFTFLVESMKKVMNSSDKEYLTTCLTLVNGIVNS
SEEIDERIQLRTEFTRLGLDEV---

Frame A:
lgivmlyynr*r*hvyyhc*tqsmv*rkr*qhpiq*lg*shqwihqkriqdrvylky*qr
yv*sqrkvin*f*rq*htlnkfvrnvldlhf*wnq*rk**ihqirsi*qlv*lwsmvl*i
hqrksmnvfn*elslqdwdwmr---


Frame B:
wg**cyitivsgnmfiiivklkvwyresdsntqfnd*vnhingytksgykieci*nidsd
mydlrerlsidsrgndtl*tss*gtf*iyifsgineesnefir*gvfnnlfnfgqwyckf
irgnr*tysien*vykigig*g---


Frame C:
GDSDVILQSLAVTCLLSLLNSKYGIEKAIATPNSMIRLITSMDTPKADTRSSVFEILTAI
CMISEKGYQLILEAMTHFKQVRKERFRFTFLVESMKKVMNSSDKEYLTTCLTLVNGIVNS
SEEIDERIQLRTEFTRLGLDEV---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHG241 (CHG241Q) /CSM/CH/CHG2-B/CHG241Q.Seq.d/                        850   0.0
SHF525 (SHF525Q) /CSM/SH/SHF5-B/SHF525Q.Seq.d/                        751   0.0
CHF689 (CHF689Q) /CSM/CH/CHF6-D/CHF689Q.Seq.d/                        714   0.0
AHB713 (AHB713Q) /CSM/AH/AHB7-A/AHB713Q.Seq.d/                        644   0.0
AHF519 (AHF519Q) /CSM/AH/AHF5-A/AHF519Q.Seq.d/                        591   e-168
CHE649 (CHE649Q) /CSM/CH/CHE6-C/CHE649Q.Seq.d/                        100   3e-20
SSL261 (SSL261Q) /CSM/SS/SSL2-C/SSL261Q.Seq.d/                         34   1.7
SSK696 (SSK696Q) /CSM/SS/SSK6-D/SSK696Q.Seq.d/                         34   1.7
VSG525 (VSG525Q) /CSM/VS/VSG5-B/VSG525Q.Seq.d/                         32   6.7
VSG366 (VSG366Q) /CSM/VS/VSG3-C/VSG366Q.Seq.d/                         32   6.7

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

BG683964|BG683964.1 602651464T1 NIH_MGC_47 Homo sapiens cDNA clone IMAGE:4761830 3', mRNA sequence.    46   0.47   1
BF163288|BF163288.1 601771826F1 NCI_CGAP_Lu29 Mus musculus cDNA clone IMAGE:3990871 5', mRNA sequence.    42   0.69   2
CK652863|CK652863.1 AGENCOURT_17673961 NIH_MGC_237 Rattus norvegicus cDNA clone IMAGE:7111340 5', mRNA sequence.    42   0.70   2
CD804387|CD804387.1 UI-M-GV0-cie-l-03-0-UI.r1 NIH_BMAP_GV0 Mus musculus cDNA clone IMAGE:30545450 5', mRNA sequence.    34   1.3    2
CA785391|CA785391.1 sau10h07.y1 Gm-c1062 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1062-8030 5', mRNA sequence.    44   1.9    1
AC097419|AC097419.8 Rattus norvegicus clone CH230-214O17, WORKING DRAFT SEQUENCE, 5 unordered pieces.    42   2.2    2
AC104341|AC104341.1 Mus musculus clone RP24-370I17, LOW-PASS SEQUENCE SAMPLING.    36   2.6    2
BX927341|BX927341.3 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone  DKEY-56J1.    36   3.6    3
AC105312|AC105312.2 Homo sapiens BAC clone RP11-17C4 from 4, complete sequence.    32   4.1    4
AP004599|AP004599.1 Oceanobacillus iheyensis HTE831 genomic DNA, section 7/13.    36   4.1    6

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q6NTV6) RecName: Full=Inverted formin-2;  &BC068848_1(BC068848|...    94   1e-18
BC084125_1(BC084125|pid:none) Xenopus laevis hypothetical LOC495...    94   1e-18
(Q0GNC1) RecName: Full=Inverted formin-2;  &DQ834374_1(DQ834374|...    94   2e-18
AK290083_1(AK290083|pid:none) Homo sapiens cDNA FLJ75252 complet...    92   4e-18
BX248757_1(BX248757|pid:none) human full-length cDNA 5-PRIME end...    92   4e-18
(Q27J81) RecName: Full=Inverted formin-2; AltName: Full=HBEBP2-b...    92   4e-18
(Q5TJ55) RecName: Full=Formin-D; AltName: Full=Diaphanous-relate...    90   2e-17
CR925815_1(CR925815|pid:none) Zebrafish DNA sequence from clone ...    89   4e-17
(Q6ZPF4) RecName: Full=Formin-like protein 3;  &AK155331_1(AK155...    86   4e-16
(Q8IVF7) RecName: Full=Formin-like protein 3; AltName: Full=Form...    86   4e-16

 psg: 0.75  gvh: 0.72  alm: 0.33  top: 0.53  tms: 0.00  mit: 0.14  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: cytoplasmic
	 24.0 %: nuclear
	 12.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: Golgi
	  4.0 %: vesicles of secretory system

>> prediction for CHG241 is cyt

>CHG241F.Seq
CTGGGGATAGTGATGTTATATTACAATCGTTAGCGGTAACATGTTTATTATCATTGTTAA
ACTCAAAGTATGGTATAGAGAAAGCGATAGCAACACCCAATTCAATGATTAGGTTAATCA
CATCAATGGATACACCAAAAGCGGATACAAGATCGAGTGTATTTGAAATATTGACAGCGA
TATGTATGATCTCAGAGAAAGGTTATCAATTGATTCTAGAGGCAATGACACACTTTAAAC
AAGTTCGTAAGGAACGTTTTAGATTTACATTTTTAGTGGAATCAATGAAGAAAGTAATGA
ATTCATCAGATAAGGAGTATTTAACAACTTGTTTAACTTTGGTCAATGGTATTGTAAATT
CATCAGAGGAAATCGATGAACGTATTCAATTGAGAACTGAGTTTACAAGATTGGGATTGG
ATGAGGTAANNNNNNNNNN