>CHF177 (CHF177Q) /CSM/CH/CHF1-D/CHF177Q.Seq.d/
XXXXXXXXXXATTTGATCAAGGTGGTACAAACCCATTGGGTGATCTAATGCCAGACATTA
GAACTGTCTTTGAAAAATGTTTTTTCCAAGTACACTCGCCGCTCAACCGTTGGTCAGAGG
TGATGATATCGAATTACTCTTATGGGACGTCCAAGGTTTCCCATGTANATTCGCTGTCGA
AGGTGGTCAATGTATCGATCCTTCAAGCTTGAAAGTTGGTGGTAAATACTCGTTTATTGC
CTTTTCAACATGTCGTTNTAAATTTGATAATCAAAAAATTCACGATTGTGATTGGATCAT
TCAAGGCCCCACAACTCCATCGNTATGCGCAAATTGTGGTAAAATTTGCACTTCAAAATG
TACAACAAACTATTGTGATCGTGATNGTCAAACTG

---*srwykpig*snarh*ncl*KMFFPSTLAAQPLVRGDDIELLLWDVQGFPCXFAVEG
GQCIDPSSLKVGGKYSFIAFSTCRXKFDNQKIHDCDWIIQGPTTPSXCANCGKICTSKCT
TNYCDRDXQT

Frame A:
---fdqggtnplgdlmpdirtvfekcffqvhsplnrwsevmisnysygtskvshvxslsk
vvnvsilqa*klvvntrllpfqhvvxnliikkftivigsfkapqlhryaqivvkfalqnv
qqtivivxvkl


Frame B:
---likvvqthwvi*cqtlelslknvfskytrrstvgqr**yritlmgrprfpmxircrr
wsmyrsfklesww*ilvyclfnmsx*i**sknsrl*ldhsrphnsixmrklw*nlhfkmy
nkll*s*xsn


Frame C:
---*srwykpig*snarh*ncl*KMFFPSTLAAQPLVRGDDIELLLWDVQGFPCXFAVEG
GQCIDPSSLKVGGKYSFIAFSTCRXKFDNQKIHDCDWIIQGPTTPSXCANCGKICTSKCT
TNYCDRDXQT

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHF177 (CHF177Q) /CSM/CH/CHF1-D/CHF177Q.Seq.d/                        739   0.0
SHL102 (SHL102Q) /CSM/SH/SHL1-A/SHL102Q.Seq.d/                        731   0.0
CHR420 (CHR420Q) /CSM/CH/CHR4-A/CHR420Q.Seq.d/                        731   0.0
CHM846 (CHM846Q) /CSM/CH/CHM8-B/CHM846Q.Seq.d/                        731   0.0
CHF421 (CHF421Q) /CSM/CH/CHF4-A/CHF421Q.Seq.d/                        731   0.0
CHE616 (CHE616Q) /CSM/CH/CHE6-A/CHE616Q.Seq.d/                        731   0.0
AHR373 (AHR373Q) /CSM/AH/AHR3-D/AHR373Q.Seq.d/                        731   0.0
AHO814 (AHO814Q) /CSM/AH/AHO8-A/AHO814Q.Seq.d/                        731   0.0
AHF612 (AHF612Q) /CSM/AH/AHF6-A/AHF612Q.Seq.d/                        724   0.0
AHH739 (AHH739Q) /CSM/AH/AHH7-B/AHH739Q.Seq.d/                        718   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence.   731   0.0    1
AC108322|AC108322.4 Rattus norvegicus clone CH230-261G16, *** SEQUENCING IN PROGRESS ***, 2 unordered pieces.    48   0.11   1
BX511305|BX511305.7 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone  DKEY-76H4.    36   0.17   3
AC091834|AC091834.2 Homo sapiens chromosome 5 clone CTD-2054H24, complete sequence.    36   0.75   4
AC011240|AC011240.3 Homo sapiens chromosome 3 clone RP11-436A20, WORKING DRAFT SEQUENCE, 43 unordered pieces.    40   0.95   3
AC107582|AC107582.5 Rattus norvegicus clone CH230-29B17, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces.    38   1.4    3
U43282|U43282.1 Caenorhabditis elegans cosmid T22E5, complete sequence.    44   1.7    1
AU216516|AU216516.1 Caenorhabditis elegans cDNA clone:yk838g12 : 3' end, single read.    44   1.7    1
AU214172|AU214172.1 Caenorhabditis elegans cDNA clone:yk810b04 : 3' end, single read.    44   1.7    1
AC146908|AC146908.1 Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0063C17, *** SEQUENCING IN PROGRESS ***, 76 unordered pieces.    44   1.7    1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CP000620_48(CP000620|pid:none) Burkholderia vietnamiensis G4 pla...    33   2.3
DQ834383_10(DQ834383|pid:none) Ralstonia sp. PHS1 btx operon, pa...    33   3.0
CP000089_2746(CP000089|pid:none) Dechloromonas aromatica RCB, co...    33   3.0
CP000742_472(CP000742|pid:none) Methanococcus vannielii SB, comp...    32   5.1
AY500357_1(AY500357|pid:none) Homo sapiens zinc finger protein 1...    32   5.1
AC116330_2(AC116330|pid:none) Dictyostelium discoideum chromosom...    32   8.6

 psg: 0.93  gvh: 0.64  alm: 0.42  top: 0.20  tms: 0.00  mit: 0.34  mip: 0.04
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: extracellular, including cell wall
	 20.0 %: cytoplasmic
	 12.0 %: endoplasmic reticulum
	  8.0 %: vacuolar
	  8.0 %: nuclear
	  4.0 %: mitochondrial
	  4.0 %: vesicles of secretory system

>> prediction for CHF177 is exc

>CHF177Z.Seq
NNNNNNNNNNATTTGATCAAGGTGGTACAAACCCATTGGGTGATCTAATGCCAGACATTA
GAACTGTCTTTGAAAAATGTTTTTTCCAAGTACACTCGCCGCTCAACCGTTGGTCAGAGG
TGATGATATCGAATTACTCTTATGGGACGTCCAAGGTTTCCCATGTANATTCGCTGTCGA
AGGTGGTCAATGTATCGATCCTTCAAGCTTGAAAGTTGGTGGTAAATACTCGTTTATTGC
CTTTTCAACATGTCGTTNTAAATTTGATAATCAAAAAATTCACGATTGTGATTGGATCAT
TCAAGGCCCCACAACTCCATCGNTATGCGCAAATTGTGGTAAAATTTGCACTTCAAAATG
TACAACAAACTATTGTGATCGTGATNGTCAAACTG