>CHE152 (CHE152Q) /CSM/CH/CHE1-C/CHE152Q.Seq.d/
XXXXXXXXXXCCACCTCCACCACCAGGTGGTAAATTAGCACCATCAACACCACAACTATG
TTCACGNCCACCATCAATTACCAATGAAATCANATCAATGGACACGTTATCGTACTAGAA
ACGTTACCNATACATTCTGGAAGAATGTTAATCTCACAAAG

---hlhhqvvn*HHQHHNYVHXHHQLPMKSXQWTRYRTRNVTXTFWKNVNLTK

Frame A:
---hlhhqvvn*HHQHHNYVHXHHQLPMKSXQWTRYRTRNVTXTFWKNVNLTK


Frame B:
---tsttrw*istintttmftxtinyq*nxinghvivletlpihsgrmlisq


Frame C:
---ppppggklapstpqlcsrppsitneixsmdtlsy*kryxyileec*shk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHE152 (CHE152Q) /CSM/CH/CHE1-C/CHE152Q.Seq.d/                        281   1e-75
CHF259 (CHF259Q) /CSM/CH/CHF2-C/CHF259Q.Seq.d/                        258   2e-68
CFH376 (CFH376Q) /CSM/CF/CFH3-D/CFH376Q.Seq.d/                        258   2e-68
AFF686 (AFF686Q) /CSM/AF/AFF6-D/AFF686Q.Seq.d/                        244   3e-64
CHI467 (CHI467Q) /CSM/CH/CHI4-C/CHI467Q.Seq.d/                        242   1e-63
AFG401 (AFG401Q) /CSM/AF/AFG4-A/AFG401Q.Seq.d/                        242   1e-63
SLE344 (SLE344Q) /CSM/SL/SLE3-B/SLE344Q.Seq.d/                        240   5e-63
SSF282 (SSF282Q) /CSM/SS/SSF2-D/SSF282Q.Seq.d/                         34   0.58
SSA304 (SSA304Q) /CSM/SS/SSA3-A/SSA304Q.Seq.d/                         34   0.58
CHE289 (CHE289Q) /CSM/CH/CHE2-D/CHE289Q.Seq.d/                         34   0.58

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC106085|AC106085.5 Rattus norvegicus clone CH230-125G16, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces.    32   0.28   2
AC112593|AC112593.4 Rattus norvegicus clone CH230-33O5, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces.    32   0.28   2
AC120311|AC120311.4 Rattus norvegicus clone CH230-480G19, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces.    42   2.1    1
AC109080|AC109080.5 Rattus norvegicus clone CH230-261D7, *** SEQUENCING IN PROGRESS ***, 56 unordered pieces.    42   2.1    1
AP005739|AP005739.2 Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0012A04.    34   2.8    2
AC141482|AC141482.2 Mus musculus chromosome UNK clone RP23-159C3, WORKING DRAFT SEQUENCE, 15 unordered pieces.    30   3.7    2
AC114805|AC114805.2 Homo sapiens chromosome 4 clone RP11-1214A2, WORKING DRAFT SEQUENCE, 12 unordered pieces.    30   3.8    2
AC114815|AC114815.5 Homo sapiens BAC clone RP11-1369K4 from 4, complete sequence.    30   3.9    2
AL121955|AL121955.20 Human DNA sequence from clone RP1-62D2 on chromosome 6.    40   8.4    1
CB483546|CB483546.1 ccluwtbl008005 Coregonus clupeaformis head Coregonus clupeaformis cDNA, mRNA sequence.    40   8.4    1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q5TJ55) RecName: Full=Formin-D; AltName: Full=Diaphanous-relate...    55   2e-13

 psg: 0.68  gvh: 0.33  alm: 0.73  top: 0.53  tms: 0.00  mit: 0.53  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 68.0 %: mitochondrial
	 16.0 %: nuclear
	 12.0 %: cytoplasmic
	  4.0 %: cytoskeletal

>> prediction for CHE152 is mit

>CHE152Z.Seq
NNNNNNNNNNCCACCTCCACCACCAGGTGGTAAATTAGCACCATCAACACCACAACTATG
TTCACGNCCACCATCAATTACCAATGAAATCANATCAATGGACACGTTATCGTACTAGAA
ACGTTACCNATACATTCTGGAAGAATGTTAATCTCACAAAG