>CHD753 (CHD753Q) /CSM/CH/CHD7-C/CHD753Q.Seq.d/
XXXXXXXXXXTAATACAAGCATGTGGTCCAGATAATAATTACCAATGTGAATTTGTTGAT
AAGATATGTAACACTACTAATGACAAATGTTTAGTAGAATCTTGTGAAATAGGTTTTGGT
TGTCTTGCAATTCCAAAAAATTGTAATGATAATGATCCATGTACCACTGATCATTGTGAT
CCAGCTATAGGTTGTTATTATGATAAGTTTGATAATTGTGATGCATGTAATGCTGTAGAT
ACTTGTATTACAAATGATTTATGCTTCCCAAGGGAATGTAATCCAAGAGGGAACCCACCT
TGTTTAATAAACCCTATTAATTGTACAAGCACTGATCCATGCATTTTTTCATATTGTGAA
AATGGTGTATGTATTCCAACATACATTTGTACTCCAACTCCATCTGTAACTCCAACTGTT
ACCCCAACTGTTACTCCAACTGTTACCCCAACTGTTACACCAACCGTTACTCCAACCGTT
ACCCCAACTCCAACTACAACTCCAACTCCATCACCAACCACTGTCCCACCAAGACCAACC
CCAACTCCATTACCAGCTGATCCACCACCATATGATTTAGAAGAAGGTTGTTTAGTATGT
CGTGATCTTGATTGTGAAAAAACAGGTAAGAGTTGTACATACCTTGAAAA

---IQACGPDNNYQCEFVDKICNTTNDKCLVESCEIGFGCLAIPKNCNDNDPCTTDHCDP
AIGCYYDKFDNCDACNAVDTCITNDLCFPRECNPRGNPPCLINPINCTSTDPCIFSYCEN
GVCIPTYICTPTPSVTPTVTPTVTPTVTPTVTPTVTPTVTPTPTTTPTPSPTTVPPRPTP
TPLPADPPPYDLEEGCLVCRDLDCEKTGKSCTYLE

Frame A:
---ntsmwsr**lpm*ic**dm*hy**qmfsril*nrfwlscnskkl****smyh*sl*s
syrlll**v**l*cm*ccrylyyk*fmlpkgm*skreptlfnkpy*lykh*smhffil*k
wcmysnihlysnsicnsncypncysncypncytnrysnrypnsnynsnsitnhcptktnp
nsits*stti*frrrlfsms*s*l*knr*elyip*k


Frame B:
---IQACGPDNNYQCEFVDKICNTTNDKCLVESCEIGFGCLAIPKNCNDNDPCTTDHCDP
AIGCYYDKFDNCDACNAVDTCITNDLCFPRECNPRGNPPCLINPINCTSTDPCIFSYCEN
GVCIPTYICTPTPSVTPTVTPTVTPTVTPTVTPTVTPTVTPTPTTTPTPSPTTVPPRPTP
TPLPADPPPYDLEEGCLVCRDLDCEKTGKSCTYLE


Frame C:
---ykhvvqiiitnvnlliryvtllmtnv**nlvk*vlvvlqfqkivmimihvpliiviq
l*vvimisliivmhvml*ilvlqmiyasqgnviqegthlv**tllivqalihaffhivkm
vyvfqhtfvlqlhl*lqllpqlllqllpqllhqpllqplpqlqlqlqlhhqplshqdqpq
lhyqlihhhmi*kkvv*yvvilivkkqvrvvhtlk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHD753 (CHD753Q) /CSM/CH/CHD7-C/CHD753Q.Seq.d/                        932   0.0
CFF487 (CFF487Q) /CSM/CF/CFF4-D/CFF487Q.Seq.d/                        932   0.0
CHH341 (CHH341Q) /CSM/CH/CHH3-B/CHH341Q.Seq.d/                        926   0.0
CHB474 (CHB474Q) /CSM/CH/CHB4-D/CHB474Q.Seq.d/                        926   0.0
SHF881 (SHF881Q) /CSM/SH/SHF8-D/SHF881Q.Seq.d/                        918   0.0
CFC857 (CFC857Q) /CSM/CF/CFC8-C/CFC857Q.Seq.d/                        896   0.0
CHQ213 (CHQ213Q) /CSM/CH/CHQ2-A/CHQ213Q.Seq.d/                        880   0.0
AFN818 (AFN818Q) /CSM/AF/AFN8-A/AFN818Q.Seq.d/                        878   0.0
CHB286 (CHB286Q) /CSM/CH/CHB2-D/CHB286Q.Seq.d/                        874   0.0
CHB332 (CHB332Q) /CSM/CH/CHB3-B/CHB332Q.Seq.d/                        854   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

X16057|X16057.1 Dictyostelium discoideum DNA for cyclic nucleotide phosphodiesterase inhibitor.    56   6e-04  1
M20909|M20909.1 Dictyostelium discoideum cell surface glycoprotein PsA precursor (D19) gene, complete cds.    42   0.023  2
X15980|X15980.1 Dictyostelium discoideum D19 gene 5'-flanking region.    42   0.051  2
X02398|X02398.1 Zygosaccharomyces rouxii plasmid pSR1.             36   0.61   2
AC128037|AC128037.3 Rattus norvegicus clone CH230-480P10, *** SEQUENCING IN PROGRESS ***, 2 unordered pieces.    46   0.61   1
AC103146|AC103146.5 Rattus norvegicus clone CH230-37H7, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces.    46   0.61   1
AC145244|AC145244.2 Gallus gallus clone CH261-124A8, WORKING DRAFT SEQUENCE, 3 ordered pieces.    46   0.61   1
AC118948|AC118948.6 Rattus norvegicus clone CH230-91A14, *** SEQUENCING IN PROGRESS ***, 2 unordered pieces.    46   0.61   1
CC209859|CC209859.1 CH261-95M24_RM1.1 CH261 Gallus gallus genomic clone CH261-95M24, DNA sequence.    46   0.61   1
AQ517158|AQ517158.1 HS_5116_B1_B11_T7A RPCI-11 Human Male BAC Library Homo sapiens genomic clone Plate=692 Col=21 Row=D, genomic survey sequence.    40   0.88   2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54FD8) RecName: Full=Protein psiD; Flags: Precursor;                332   7e-90
(Q1ZXC5) RecName: Full=Protein psiC; Flags: Precursor;                110   3e-23
(Q54C31) RecName: Full=Protein psiR; Flags: Precursor;                 78   2e-13
(Q54C32) RecName: Full=Protein psiQ; Flags: Precursor;                 77   5e-13
(Q54G85) RecName: Full=Protein psiJ; Flags: Precursor;                 75   2e-12
(Q54CH8) RecName: Full=Protein psiN; Flags: Precursor;                 72   2e-11
AC117072_61(AC117072|pid:none) Dictyostelium discoideum chromoso...    70   4e-11
S44208(S44208) extracellular matrix protein B - Dictyostelium mi...    67   3e-10
A26838(A26838)prestalk protein precursor - slime mold (Dictyoste...    64   3e-09
(P11976) RecName: Full=Prestalk protein; AltName: Full=Extracell...    64   4e-09

 psg: 0.75  gvh: 0.49  alm: 0.43  top: 0.53  tms: 0.00  mit: 0.18  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 24.0 %: nuclear
	  8.0 %: cytoskeletal
	  8.0 %: Golgi
	  4.0 %: mitochondrial
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system
	  4.0 %: endoplasmic reticulum

>> prediction for CHD753 is cyt

>CHD753Z.Seq
NNNNNNNNNNTAATACAAGCATGTGGTCCAGATAATAATTACCAATGTGAATTTGTTGAT
AAGATATGTAACACTACTAATGACAAATGTTTAGTAGAATCTTGTGAAATAGGTTTTGGT
TGTCTTGCAATTCCAAAAAATTGTAATGATAATGATCCATGTACCACTGATCATTGTGAT
CCAGCTATAGGTTGTTATTATGATAAGTTTGATAATTGTGATGCATGTAATGCTGTAGAT
ACTTGTATTACAAATGATTTATGCTTCCCAAGGGAATGTAATCCAAGAGGGAACCCACCT
TGTTTAATAAACCCTATTAATTGTACAAGCACTGATCCATGCATTTTTTCATATTGTGAA
AATGGTGTATGTATTCCAACATACATTTGTACTCCAACTCCATCTGTAACTCCAACTGTT
ACCCCAACTGTTACTCCAACTGTTACCCCAACTGTTACACCAACCGTTACTCCAACCGTT
ACCCCAACTCCAACTACAACTCCAACTCCATCACCAACCACTGTCCCACCAAGACCAACC
CCAACTCCATTACCAGCTGATCCACCACCATATGATTTAGAAGAAGGTTGTTTAGTATGT
CGTGATCTTGATTGTGAAAAAACAGGTAAGAGTTGTACATACCTTGAAAA