>CHD620 (CHD620Q) /CSM/CH/CHD6-A/CHD620Q.Seq.d/
ATTAGCAGCAAAAGTAAAATGGGCATTAACACCAGCTCCAAGAAGAGGTGAAATTGTTAG
ATTAATTGGTCAAGCCATGAGAGAAAAAATTGAACCATTATCAAAATTAATTTCATTAGA
AATGGGTAAAATTTACATTGAAGCTAAAGGTGAAGTACAAGAATTCATTGACGTATGCGA
TTATGCAACTGGTTTAAGTAGATCAATCAATGGTCAAGTGATGCCATCTGAACGTCCAAA
TCACATTTTAATGGAAACCTGGAATCCATTAGGTTTAGTTGGTATCATTACTGCTTTCAA
TTTCCCATGTGCCGTACTTGGTTGGAATGCTGCAATCTCAATGATTTGCGGTAACGTCCA
ATTATGGAAAGGTGCCTCCACCACTTCACTCATTACATTAGCCGTTAGCAAAATCATTGA
AAAGGTTTTAGTTGAAAATGATGTCGACCCAGCCGTCTGTTGTGTCCTCATTGGTCCAGG
TCGTACCGTTGGTGAACAAATGATTCAAGATAAACGTTTCGGTTTAATTTCATTCACTXX
XXXXXXXX

LAAKVKWALTPAPRRGEIVRLIGQAMREKIEPLSKLISLEMGKIYIEAKGEVQEFIDVCD
YATGLSRSINGQVMPSERPNHILMETWNPLGLVGIITAFNFPCAVLGWNAAISMICGNVQ
LWKGASTTSLITLAVSKIIEKVLVENDVDPAVCCVLIGPGRTVGEQMIQDKRFGLISF--
-

Frame A:
isskskmgintsskkr*nc*inwssherkn*tiikinfirng*nlh*s*r*strih*rmr
lcnwfk*inqwssdai*tskshfngnlesirfswyhycfqfpmcrtwleccnlndlr*rp
imerclhhfthyisr*qnh*kgfs*k*crpsrllcphwsrsyrw*tndsr*tfrfnfih-
--


Frame B:
LAAKVKWALTPAPRRGEIVRLIGQAMREKIEPLSKLISLEMGKIYIEAKGEVQEFIDVCD
YATGLSRSINGQVMPSERPNHILMETWNPLGLVGIITAFNFPCAVLGWNAAISMICGNVQ
LWKGASTTSLITLAVSKIIEKVLVENDVDPAVCCVLIGPGRTVGEQMIQDKRFGLISF--
-


Frame C:
*qqk*ngh*hqlqeevklld*lvkp*ekklnhyqn*fh*kwvkftlklkvkyknsltyai
mqlv*vdqsmvk*chlnvqitf*wkpgih*v*lvslllsishvpylvgmlqsq*favtsn
ygkvppplhslh*plakslkrf*lkmmstqpsvvsslvqvvplvnk*fkinvsv*fhs--
-

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHD620 (CHD620Q) /CSM/CH/CHD6-A/CHD620Q.Seq.d/                       1066   0.0
VFL108 (VFL108Q) /CSM/VF/VFL1-A/VFL108Q.Seq.d/                       1065   0.0
SFA430 (SFA430Q) /CSM/SF/SFA4-B/SFA430Q.Seq.d/                       1065   0.0
CHC616 (CHC616Q) /CSM/CH/CHC6-A/CHC616Q.Seq.d/                       1063   0.0
SLC178 (SLC178Q) /CSM/SL/SLC1-D/SLC178Q.Seq.d/                       1005   0.0
SFF552 (SFF552Q) /CSM/SF/SFF5-C/SFF552Q.Seq.d/                       1003   0.0
FC-AA10 (FC-AA10Q) /CSM/FC/FC-AA/FC-AA10Q.Seq.d/                      922   0.0
VFB844 (VFB844Q) /CSM/VF/VFB8-B/VFB844Q.Seq.d/                        916   0.0
SLE339 (SLE339Q) /CSM/SL/SLE3-B/SLE339Q.Seq.d/                        888   0.0
CFD614 (CFD614Q) /CSM/CF/CFD6-A/CFD614Q.Seq.d/                        886   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC117076|AC117076.3 Dictyostelium discoideum chromosome 2 map 3323568-3470138 strain AX4, complete sequence.  1065   0.0    1
BU042811|BU042811.1 PP_LEa0014A23f Peach developing fruit mesocarp Prunus persica cDNA clone PP_LEa0014A23f, mRNA sequence.    74   4e-12  2
CV149734|CV149734.1 Mdst6007g23.y1 Mdst Malus x domestica cDNA clone Mdst6007g23 5' similar to TR:Q9ZPB7 Q9ZPB7 PROTEIN ABUNDANTLY EXPRESSED DURING APPLE FRUIT DEVELOPMENT. ;, mRNA sequence.    72   1e-08  1
CV150833|CV150833.1 Mdst6010o01.y1 Mdst Malus x domestica cDNA clone Mdst6010o01 5' similar to TR:Q9ZPB7 Q9ZPB7 PROTEIN ABUNDANTLY EXPRESSED DURING APPLE FRUIT DEVELOPMENT. ;, mRNA sequence.    72   1e-08  1
CN875989|CN875989.1 020813AARA008546HT (AARA) Royal Gala partially senescing leaf Malus x domestica cDNA clone AARA008546, mRNA sequence.    72   1e-08  1
D88434|D88434.1 Malus domestica mRNA for protein abundantly expressed during apple fruit development, complete cds.    72   1e-08  1
CN903667|CN903667.1 021018ABCA005552HT (ABCA) Royal Gala fruit stored at 0.5 degrees C for 24 hours Malus x domestica cDNA clone ABCA005552, mRNA sequence.    72   1e-08  1
CN883223|CN883223.1 010813AASB004877HT (AASB) Royal Gala 10 DAFB fruit Malus x domestica cDNA clone AASB004877, mRNA sequence.    72   1e-08  1
CN895049|CN895049.1 010626AAYA004321HT (AAYA) Royal Gala 126 DAFB fruit cortex Malus x domestica cDNA clone AAYA004321, mRNA sequence.    64   3e-06  1
CN902319|CN902319.1 021014ABCA004075HT (ABCA) Royal Gala fruit stored at 0.5 degrees C for 24 hours Malus x domestica cDNA clone ABCA004075, mRNA sequence.    64   3e-06  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P83401) RecName: Full=Putative aldehyde dehydrogenase family 7 ...   359   3e-98
(P49419) RecName: Full=Alpha-aminoadipic semialdehyde dehydrogen...   226   4e-58
BC044367_1(BC044367|pid:none) Danio rerio aldehyde dehydrogenase...   225   5e-58
EF678715_1(EF678715|pid:none) Picea sitchensis clone WS0295_M17 ...   225   5e-58
AK297365_1(AK297365|pid:none) Homo sapiens cDNA FLJ56008 complet...   224   8e-58
BT044648_1(BT044648|pid:none) Salmo salar clone ssal-rgf-001-326...   224   1e-57
AY847462_1(AY847462|pid:none) Acanthopagrus schlegelii antiquiti...   222   4e-57
AK160117_1(AK160117|pid:none) Mus musculus osteoclast-like cell ...   221   7e-57
(Q9DBF1) RecName: Full=Alpha-aminoadipic semialdehyde dehydrogen...   221   7e-57
AK145873_1(AK145873|pid:none) Mus musculus 14 days embryo liver ...   220   2e-56

 psg: 0.72  gvh: 0.39  alm: 0.29  top: 0.70  tms: 0.07  mit: 0.31  mip: 0.04
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 1.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 48.0 %: nuclear
	 28.0 %: cytoplasmic
	 12.0 %: mitochondrial
	  8.0 %: Golgi
	  4.0 %: vesicles of secretory system

>> prediction for CHD620 is nuc

>CHD620F.Seq
ATTAGCAGCAAAAGTAAAATGGGCATTAACACCAGCTCCAAGAAGAGGTGAAATTGTTAG
ATTAATTGGTCAAGCCATGAGAGAAAAAATTGAACCATTATCAAAATTAATTTCATTAGA
AATGGGTAAAATTTACATTGAAGCTAAAGGTGAAGTACAAGAATTCATTGACGTATGCGA
TTATGCAACTGGTTTAAGTAGATCAATCAATGGTCAAGTGATGCCATCTGAACGTCCAAA
TCACATTTTAATGGAAACCTGGAATCCATTAGGTTTAGTTGGTATCATTACTGCTTTCAA
TTTCCCATGTGCCGTACTTGGTTGGAATGCTGCAATCTCAATGATTTGCGGTAACGTCCA
ATTATGGAAAGGTGCCTCCACCACTTCACTCATTACATTAGCCGTTAGCAAAATCATTGA
AAAGGTTTTAGTTGAAAATGATGTCGACCCAGCCGTCTGTTGTGTCCTCATTGGTCCAGG
TCGTACCGTTGGTGAACAAATGATTCAAGATAAACGTTTCGGTTTAATTTCATTCACTNN
NNNNNNNN