>CHD302 (CHD302Q) /CSM/CH/CHD3-A/CHD302Q.Seq.d/
XXXXXXXXXXGTGAAACTGTAACATGTGATAAAATTGTTTGTGATCCATCATATTTNCCA
AANAAAGTTCAAAAGAAAGGTAAAATTATTCGTTCAATTTGTATTTTGAANGGNCCAANT
CCATNTGNTNATAANAAATTTGAATCACTCCAAATCATTATCCCNCAAAAACAAGTTNAA
CGTCAATNAGATATGTACGTTGGTGTTANGTCATCCGCTCATTGNGTCTGNCCAAANGGT
NAANACNTTGCCATCGTTTCAGCCNCTGTTTAAACCAATNAACCANANAAAGNATTAGCN
CCAGCTTACGCTTTNTTAGGTCCNATTCNANAGAAATTTGNCTATATTTCTGATTTCANT
GNACCNANTNCTGATGGNACTGCCGACAATGTTTTCATCNCAAAATCANATGAAGNAACC
NCNCCCCANTNAATGTTGCCTTT

---ETVTCDKIVCDPSYXPXKVQKKGKIIRSICILXGPXPXXXXKFESLQIIIPQKQVXR
QXDMYVGVXSSAHXVXPXGXXXAIVSAXV*tnxpxkxlapayaxlgpixxkfxyisdfxx
pxxdgtadnvfixksxextxpxxmlp

Frame A:
---*ncnm**ncl*siifxkxssker*nysfnlyfexxxsxxx*xi*itpnhypxktsxt
sxryvrwcxvirslxlxkxxxxchrfsxclnqxtxxxisxslrfxrsxsxeixlyf*fxx
txx*wxcrqcfhxkix*xnxxpxnvaf


Frame B:
---ETVTCDKIVCDPSYXPXKVQKKGKIIRSICILXGPXPXXXXKFESLQIIIPQKQVXR
QXDMYVGVXSSAHXVXPXGXXXAIVSAXV*tnxpxkxlapayaxlgpixxkfxyisdfxx
pxxdgtadnvfixksxextxpxxmlp


Frame C:
---kl*hviklfvihhixqxkfkrkvklfvqfvf*xxqxhxxixnlnhskslsxknkxnv
nxictlvlxhplixsxqxvxtlpsfqplfkpxnxxkx*xqltlx*vxfxrnlxiflisxx
xxlmxlptmfssqnxmkxpxpxxccl

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHD302 (CHD302Q) /CSM/CH/CHD3-A/CHD302Q.Seq.d/                        603   e-172
VFJ639 (VFJ639Q) /CSM/VF/VFJ6-B/VFJ639Q.Seq.d/                        565   e-160
SLF383 (SLF383Q) /CSM/SL/SLF3-D/SLF383Q.Seq.d/                        565   e-160
SFL394 (SFL394Q) /CSM/SF/SFL3-D/SFL394Q.Seq.d/                        565   e-160
SFL120 (SFL120Q) /CSM/SF/SFL1-A/SFL120Q.Seq.d/                        565   e-160
SFJ795 (SFJ795Q) /CSM/SF/SFJ7-D/SFJ795Q.Seq.d/                        565   e-160
SFJ449 (SFJ449Q) /CSM/SF/SFJ4-C/SFJ449Q.Seq.d/                        565   e-160
SFI510 (SFI510Q) /CSM/SF/SFI5-A/SFI510Q.Seq.d/                        565   e-160
SFE141 (SFE141Q) /CSM/SF/SFE1-B/SFE141Q.Seq.d/                        565   e-160
SFD673 (SFD673Q) /CSM/SF/SFD6-D/SFD673Q.Seq.d/                        565   e-160

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AW306227|AW306227.1 se47g11.y1 Gm-c1017 Glycine max cDNA clone GENOME SYSTEMS CLONE ID:INHIBITOR. ;, mRNA sequence.    48   0.10   1
AC091550|AC091550.1 Homo sapiens chromosome 18 clone RP11-407C18 map 18, LOW-PASS SEQUENCE SAMPLING.    38   0.19   2
AI440725|AI440725.1 sa62g07.y1 Gm-c1004 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1004-3925 5' similar to TR:O22402 O22402 GDP DISSOCIATION INHIBITOR. ;, mRNA sequence.    44   1.6    1
AW831512|AW831512.1 sm26g12.y1 Gm-c1028 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1028-5087 5' similar to TR:O22402 O22402 GDP DISSOCIATION INHIBITOR. ;, mRNA sequence.    44   1.6    1
CA784798|CA784798.1 sat89e06.y1 Gm-c1062 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1062-5964 5' similar to TR:O65744 O65744 GDP DISSOCIATION INHIBITOR. ;, mRNA sequence.    44   1.6    1
BI972870|BI972870.1 sai84a09.y1 Gm-c1065 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1065-7338 5' similar to TR:O65744 O65744 GDP DISSOCIATION INHIBITOR. ;, mRNA sequence.    44   1.6    1
AW203575|AW203575.1 sf35g10.y1 Gm-c1028 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1028-2011 5' similar to TR:O22402 O22402 GDP DISSOCIATION INHIBITOR. ;, mRNA sequence.    44   1.6    1
BE059980|BE059980.1 sn39e03.y1 Gm-c1027 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1027-9653 5' similar to TR:O65744 O65744 GDP DISSOCIATION INHIBITOR. ;, mRNA sequence.    44   1.6    1
BI426472|BI426472.1 sag03f09.y1 Gm-c1080 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1080-257 5' similar to TR:O65744 O65744 GDP DISSOCIATION INHIBITOR. ;, mRNA sequence.    44   1.6    1
BI315670|BI315670.1 saf75f12.y1 Gm-c1078 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1078-2184 5' similar to TR:O65744 O65744 GDP DISSOCIATION INHIBITOR. ;, mRNA sequence.    44   1.6    1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF676817_1(EF676817|pid:none) Picea sitchensis clone WS02753_I09...   112   5e-24
EF085049_1(EF085049|pid:none) Picea sitchensis clone WS0297_P09 ...   112   5e-24
AE014134_1714(AE014134|pid:none) Drosophila melanogaster chromos...   110   1e-23
AJ401079_1(AJ401079|pid:none) Lycopersicon esculentum partial mR...   110   1e-23
AM710298_1(AM710298|pid:none) Lycopersicon esculentum GDI1 gene ...   110   1e-23
BT071197_1(BT071197|pid:none) Picea sitchensis clone WS0279_A10 ...   109   2e-23
BT039998_1(BT039998|pid:none) Zea mays full-length cDNA clone ZM...   108   6e-23
BC043955_1(BC043955|pid:none) Xenopus laevis GDP dissociation in...   107   1e-22
BC095329_1(BC095329|pid:none) Danio rerio GDP dissociation inhib...   107   1e-22
BC078017_1(BC078017|pid:none) Xenopus laevis GDP dissociation in...   107   2e-22

 psg: 0.75  gvh: 0.52  alm: 0.49  top: 0.53  tms: 0.00  mit: 0.16  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: cytoplasmic
	 24.0 %: nuclear
	 12.0 %: cytoskeletal
	 12.0 %: mitochondrial
	  4.0 %: Golgi
	  4.0 %: endoplasmic reticulum
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system

>> prediction for CHD302 is cyt

>CHD302Z.Seq
NNNNNNNNNNGTGAAACTGTAACATGTGATAAAATTGTTTGTGATCCATCATATTTNCCA
AANAAAGTTCAAAAGAAAGGTAAAATTATTCGTTCAATTTGTATTTTGAANGGNCCAANT
CCATNTGNTNATAANAAATTTGAATCACTCCAAATCATTATCCCNCAAAAACAAGTTNAA
CGTCAATNAGATATGTACGTTGGTGTTANGTCATCCGCTCATTGNGTCTGNCCAAANGGT
NAANACNTTGCCATCGTTTCAGCCNCTGTTTAAACCAATNAACCANANAAAGNATTAGCN
CCAGCTTACGCTTTNTTAGGTCCNATTCNANAGAAATTTGNCTATATTTCTGATTTCANT
GNACCNANTNCTGATGGNACTGCCGACAATGTTTTCATCNCAAAATCANATGAAGNAACC
NCNCCCCANTNAATGTTGCCTTT