>CHC251 (CHC251Q) /CSM/CH/CHC2-C/CHC251Q.Seq.d/
CTGTTGGCCTACTGGTATTGTAGTATTTTGTTCATATTCAAATTAAATATCAATACAATT
AAAAAAAGTTAAAATTAAATTTGTAAAATCAATTTGTAACAAAAACTAGTAATTTAAAAA
AAAAAAAACCAAAAAAAAAAXXXXXXXXXX

LLAYWYCSILFIFKLNINTIKKS*n*ickinl*qklvi*kkknqkk---

Frame A:
LLAYWYCSILFIFKLNINTIKKS*n*ickinl*qklvi*kkknqkk---


Frame B:
cwptgivvfcsysn*isiqlkkvkikfvksicnkn**fkkkktkkk---


Frame C:
vgllvl*yfvhiqikyqyn*kklklnl*nqfvtktsnlkkkkpkk---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHD890 (CHD890Q) /CSM/CH/CHD8-D/CHD890Q.Seq.d/                        186   6e-47
CHC476 (CHC476Q) /CSM/CH/CHC4-D/CHC476Q.Seq.d/                        186   6e-47
CHC251 (CHC251Q) /CSM/CH/CHC2-C/CHC251Q.Seq.d/                        186   6e-47
CHC222 (CHC222Q) /CSM/CH/CHC2-A/CHC222Q.Seq.d/                        186   6e-47
CHB290 (CHB290Q) /CSM/CH/CHB2-D/CHB290Q.Seq.d/                        186   6e-47
CHA366 (CHA366Q) /CSM/CH/CHA3-C/CHA366Q.Seq.d/                        186   6e-47
CHA244 (CHA244Q) /CSM/CH/CHA2-B/CHA244Q.Seq.d/                        186   6e-47
CHA164 (CHA164Q) /CSM/CH/CHA1-C/CHA164Q.Seq.d/                        186   6e-47
AFO483 (AFO483Q) /CSM/AF/AFO4-D/AFO483Q.Seq.d/                        186   6e-47
AFJ514 (AFJ514Q) /CSM/AF/AFJ5-A/AFJ514Q.Seq.d/                        186   6e-47

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

X51892|X51892.1 Dictyostelium discoideum SP60 gene for spore coat protein.    88   1e-30  2
X52105|X52105.1 Dictyostelium discoideum SP60 gene for spore coat protein.    80   2e-28  2
M34546|M34546.1 D.discoideum spore coat 60 (sp60) gene, 5' flank.    88   4e-14  1
M26239|M26239.1 D.discoideum spore coat protein SP60 gene, complete cds.    80   1e-11  1
AL161576|AL161576.2 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 72.    40   0.050  5
BV025443|BV025443.1 S212P6456FC5.T0 CZECHII/Ei Mus musculus STS genomic, sequence tagged site.    42   0.056  2
AX196294|AX196294.1 Sequence 1 from Patent WO0151627.              38   0.071  4
BX322622|BX322622.10 Zebrafish DNA sequence from clone DKEYP-14D3 in linkage group 8.    36   0.082  5
AC073090|AC073090.8 Homo sapiens BAC clone RP11-328J2 from 7, complete sequence.    32   0.095  6
AC148398|AC148398.7 Medicago truncatula clone mth2-24c23, WORKING DRAFT SEQUENCE, 2 ordered pieces.    32   0.100  7

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3039690
Number of Hits to DB: 110,951,223

 psg: 0.94  gvh: 0.36  alm: 0.36  top: 0.67  tms: 0.00  mit: 0.36  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: cytoplasmic
	 28.0 %: mitochondrial
	 28.0 %: nuclear
	  8.0 %: vacuolar

>> prediction for CHC251 is cyt

>CHC251F.Seq
CTGTTGGCCTACTGGTATTGTAGTATTTTGTTCATATTCAAATTAAATATCAATACAATT
AAAAAAAGTTAAAATTAAATTTGTAAAATCAATTTGTAACAAAAACTAGTAATTTAAAAA
AAAAAAAACCAAAAAAAAAANNNNNNNNNN