>CHC111 (CHC111Q) /CSM/CH/CHC1-A/CHC111Q.Seq.d/
CTGTTGGCCTACTGGACAAAAAACATTTTCTAATAAAACAGATAAATTAAAAAATGACTA
CCTTTAACGAATATCCATTCTTGGCTGAATTAGGCATTAAAGCTGAAAATAATGATGGAG
TCTTCAATGGAAAATGGGGAGGTGCTGGTGAAATCATCAAATGTTTAAATCCAACAAATA
ATAAAGTTATTGCAACTGTTAGAGGTGCTGCACCAGAAGAATATGAAACATGTATTCAAG
CAATGTTAGCAGCAAAAGTAAAATGGGCATTAACACCAGCTCCAAGAAGAGGTGAAATTG
TTAGATTAATTGGTCAAGCCATGAGAGAAAAAATTGAACCATTATCAAAATTAATTTCAT
TAGAAATGGGTAAAATTTACATTGAAGCTAAAGGTGAAGTACAAGAATTCATTGACGTAT
GCGATTATGCAACTGGTTTAAGTAGATCAATCAATGGTCAAGTGATGCCATCTGAACGTC
CAAATCACATTTTAATGGAAACCTGGAATCCATTAGGTTTAGTTGGTATCATTACTGCTT
TCAATTTCCCATGTGCCGTACTTGGTTGGAATGCTGCAATCTCAATGATTTGCXXXXXXX
XXX

vglldkkhflikqin*KMTTFNEYPFLAELGIKAENNDGVFNGKWGGAGEIIKCLNPTNN
KVIATVRGAAPEEYETCIQAMLAAKVKWALTPAPRRGEIVRLIGQAMREKIEPLSKLISL
EMGKIYIEAKGEVQEFIDVCDYATGLSRSINGQVMPSERPNHILMETWNPLGLVGIITAF
NFPCAVLGWNAAISMI---

Frame A:
llaywtknif**nr*ikk*lpltnihswln*alklkimmessmengevlvkssnv*iqqi
ikllqllevlhqknmkhvfkqc*qqk*ngh*hqlqeevklld*lvkp*ekklnhyqn*fh
*kwvkftlklkvkyknsltyaimqlv*vdqsmvk*chlnvqitf*wkpgih*v*lvslll
sishvpylvgmlqsq*f---


Frame B:
cwptgqktfsnktdklkndyl*risilg*irh*s*k**wslqwkmgrcw*nhqmfksnk*
*sycnc*rcctrri*nmyssnvsskskmgintsskkr*nc*inwssherkn*tiikinfi
rng*nlh*s*r*strih*rmrlcnwfk*inqwssdai*tskshfngnlesirfswyhycf
qfpmcrtwleccnlndl---


Frame C:
vglldkkhflikqin*KMTTFNEYPFLAELGIKAENNDGVFNGKWGGAGEIIKCLNPTNN
KVIATVRGAAPEEYETCIQAMLAAKVKWALTPAPRRGEIVRLIGQAMREKIEPLSKLISL
EMGKIYIEAKGEVQEFIDVCDYATGLSRSINGQVMPSERPNHILMETWNPLGLVGIITAF
NFPCAVLGWNAAISMI---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFC444 (SFC444Q) /CSM/SF/SFC4-B/SFC444Q.Seq.d/                       1176   0.0
CHC111 (CHC111Q) /CSM/CH/CHC1-A/CHC111Q.Seq.d/                       1176   0.0
CFC708 (CFC708Q) /CSM/CF/CFC7-A/CFC708Q.Seq.d/                       1176   0.0
VFN466 (VFN466Q) /CSM/VF/VFN4-C/VFN466Q.Seq.d/                       1170   0.0
CHE175 (CHE175Q) /CSM/CH/CHE1-D/CHE175Q.Seq.d/                       1168   0.0
CHE460 (CHE460Q) /CSM/CH/CHE4-C/CHE460Q.Seq.d/                       1166   0.0
SFH846 (SFH846Q) /CSM/SF/SFH8-B/SFH846Q.Seq.d/                       1156   0.0
SFD368 (SFD368Q) /CSM/SF/SFD3-C/SFD368Q.Seq.d/                       1152   0.0
SFH487 (SFH487Q) /CSM/SF/SFH4-D/SFH487Q.Seq.d/                       1148   0.0
CHA156 (CHA156Q) /CSM/CH/CHA1-C/CHA156Q.Seq.d/                       1148   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC117076|AC117076.3 Dictyostelium discoideum chromosome 2 map 3323568-3470138 strain AX4, complete sequence.   767   0.0    5
BU042811|BU042811.1 PP_LEa0014A23f Peach developing fruit mesocarp Prunus persica cDNA clone PP_LEa0014A23f, mRNA sequence.    74   4e-12  2
CN875989|CN875989.1 020813AARA008546HT (AARA) Royal Gala partially senescing leaf Malus x domestica cDNA clone AARA008546, mRNA sequence.    72   1e-08  1
CN903667|CN903667.1 021018ABCA005552HT (ABCA) Royal Gala fruit stored at 0.5 degrees C for 24 hours Malus x domestica cDNA clone ABCA005552, mRNA sequence.    72   1e-08  1
D88434|D88434.1 Malus domestica mRNA for protein abundantly expressed during apple fruit development, complete cds.    72   1e-08  1
CN883223|CN883223.1 010813AASB004877HT (AASB) Royal Gala 10 DAFB fruit Malus x domestica cDNA clone AASB004877, mRNA sequence.    72   1e-08  1
CV150833|CV150833.1 Mdst6010o01.y1 Mdst Malus x domestica cDNA clone Mdst6010o01 5' similar to TR:Q9ZPB7 Q9ZPB7 PROTEIN ABUNDANTLY EXPRESSED DURING APPLE FRUIT DEVELOPMENT. ;, mRNA sequence.    72   1e-08  1
CV149734|CV149734.1 Mdst6007g23.y1 Mdst Malus x domestica cDNA clone Mdst6007g23 5' similar to TR:Q9ZPB7 Q9ZPB7 PROTEIN ABUNDANTLY EXPRESSED DURING APPLE FRUIT DEVELOPMENT. ;, mRNA sequence.    72   1e-08  1
CN895049|CN895049.1 010626AAYA004321HT (AAYA) Royal Gala 126 DAFB fruit cortex Malus x domestica cDNA clone AAYA004321, mRNA sequence.    64   3e-06  1
CN902319|CN902319.1 021014ABCA004075HT (ABCA) Royal Gala fruit stored at 0.5 degrees C for 24 hours Malus x domestica cDNA clone ABCA004075, mRNA sequence.    64   3e-06  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P83401) RecName: Full=Putative aldehyde dehydrogenase family 7 ...   369   e-101
BC044367_1(BC044367|pid:none) Danio rerio aldehyde dehydrogenase...   228   7e-59
EF678715_1(EF678715|pid:none) Picea sitchensis clone WS0295_M17 ...   226   4e-58
BT044648_1(BT044648|pid:none) Salmo salar clone ssal-rgf-001-326...   223   4e-57
AF323586_1(AF323586|pid:none) Oryza sativa aldehyde dehydrogenas...   220   3e-56
AY883858_1(AY883858|pid:none) Sterkiella histriomuscorum turgor ...   219   6e-56
AY847462_1(AY847462|pid:none) Acanthopagrus schlegelii antiquiti...   217   2e-55
BT067707_1(BT067707|pid:none) Zea mays full-length cDNA clone ZM...   216   4e-55
AK297365_1(AK297365|pid:none) Homo sapiens cDNA FLJ56008 complet...   215   6e-55
(P49419) RecName: Full=Alpha-aminoadipic semialdehyde dehydrogen...   215   6e-55

 psg: 0.78  gvh: 0.31  alm: 0.29  top: 0.57  tms: 0.07  mit: 0.21  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 1.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 20.0 %: cytoplasmic
	 16.0 %: nuclear
	 16.0 %: vesicles of secretory system
	 12.0 %: endoplasmic reticulum
	  8.0 %: Golgi
	  8.0 %: mitochondrial
	  8.0 %: plasma membrane
	  4.0 %: extracellular, including cell wall
	  4.0 %: cytoskeletal
	  4.0 %: vacuolar

>> prediction for CHC111 is cyt

>CHC111F.Seq
CTGTTGGCCTACTGGACAAAAAACATTTTCTAATAAAACAGATAAATTAAAAAATGACTA
CCTTTAACGAATATCCATTCTTGGCTGAATTAGGCATTAAAGCTGAAAATAATGATGGAG
TCTTCAATGGAAAATGGGGAGGTGCTGGTGAAATCATCAAATGTTTAAATCCAACAAATA
ATAAAGTTATTGCAACTGTTAGAGGTGCTGCACCAGAAGAATATGAAACATGTATTCAAG
CAATGTTAGCAGCAAAAGTAAAATGGGCATTAACACCAGCTCCAAGAAGAGGTGAAATTG
TTAGATTAATTGGTCAAGCCATGAGAGAAAAAATTGAACCATTATCAAAATTAATTTCAT
TAGAAATGGGTAAAATTTACATTGAAGCTAAAGGTGAAGTACAAGAATTCATTGACGTAT
GCGATTATGCAACTGGTTTAAGTAGATCAATCAATGGTCAAGTGATGCCATCTGAACGTC
CAAATCACATTTTAATGGAAACCTGGAATCCATTAGGTTTAGTTGGTATCATTACTGCTT
TCAATTTCCCATGTGCCGTACTTGGTTGGAATGCTGCAATCTCAATGATTTGCNNNNNNN
NNN