>CHB751 (CHB751Q) /CSM/CH/CHB7-C/CHB751Q.Seq.d/
ATTTTTTATACATTAATTTTTTTTTAAAAAAAAATTATTTAATTTAAATTAACAAAGATT
TTGGCGCACAGATTTCAACAAAGATTTTTTTATTAATCAATTCCACATGATTCAATAAAG
GGGAAAATGAAATTACTTATTTTAACTTTATTTTTAGCTACTATTGTTTTAGCTCAAGCT
TTAACAGTACCATTAAACTTCCATCAAGCTTCAAGAGAATCTAGAAGAAGAGTTCCACAA
AAATGGTCAAACAGATTATCTGCTCTCAATGCTGGTACCACAATCCCAATTTCAGATTTT
GAAGATGCTCAATACTATGGTGCCATTACCATTGGTACCCCAGGTCAAGCCTTCAAAGTA
GTTTTCGATACTGGTTCATCCAACTTGTGGATTCCATCAAAGAAATGTCCAATCACTGTT
GTTGCATGTGATTTACATAACAAATATAACAGCGGTGCCTCAAGCACATATGTCGCCAAC
GGAACTGATTTCACCATCCAATACGGXXXXXXXXXX

ifytliff*kkii*fkltkilahrfqqrffy*SIPHDSIKGKMKLLILTLFLATIVLAQA
LTVPLNFHQASRESRRRVPQKWSNRLSALNAGTTIPISDFEDAQYYGAITIGTPGQAFKV
VFDTGSSNLWIPSKKCPITVVACDLHNKYNSGASSTYVANGTDFTIQY---

Frame A:
ifytliff*kkii*fkltkilahrfqqrffy*SIPHDSIKGKMKLLILTLFLATIVLAQA
LTVPLNFHQASRESRRRVPQKWSNRLSALNAGTTIPISDFEDAQYYGAITIGTPGQAFKV
VFDTGSSNLWIPSKKCPITVVACDLHNKYNSGASSTYVANGTDFTIQY---


Frame B:
ffih*fffkkklfnln*qrfwrtdfnkdffinqfhmiq*rgk*nylf*lyf*lllf*lkl
*qyh*tsiklqenleeefhkngqtdyllsmlvpqsqfqilkmlntmvplplvpqvkpsk*
fsilvhptcgfhqrnvqslllhviyitnitavpqahmsptelispsnt---


Frame C:
flyinfflkknyli*inkdfgaqistkifllinst*fnkgeneityfnfifsyycfsssf
nstiklpssfkri*kksstkmvkqiicsqcwyhnpnfrf*rcsilwchyhwyprsslqss
frywfiqlvdsikemsnhcccm*ft*qi*qrclkhicrqrn*fhhpi---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VFJ654 (VFJ654Q) /CSM/VF/VFJ6-C/VFJ654Q.Seq.d/                        839   0.0
VFE752 (VFE752Q) /CSM/VF/VFE7-C/VFE752Q.Seq.d/                        839   0.0
VFC755 (VFC755Q) /CSM/VF/VFC7-C/VFC755Q.Seq.d/                        839   0.0
VFC673 (VFC673Q) /CSM/VF/VFC6-D/VFC673Q.Seq.d/                        839   0.0
VFA504 (VFA504Q) /CSM/VF/VFA5-A/VFA504Q.Seq.d/                        839   0.0
SFK136 (SFK136Q) /CSM/SF/SFK1-B/SFK136Q.Seq.d/                        839   0.0
SFJ334 (SFJ334Q) /CSM/SF/SFJ3-B/SFJ334Q.Seq.d/                        839   0.0
SFI817 (SFI817Q) /CSM/SF/SFI8-A/SFI817Q.Seq.d/                        839   0.0
SFH318 (SFH318Q) /CSM/SF/SFH3-A/SFH318Q.Seq.d/                        839   0.0
SFG678 (SFG678Q) /CSM/SF/SFG6-D/SFG678Q.Seq.d/                        839   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

Y16962|Y16962.1 Dictyostelium discoideum mRNA for cathepsin D.    761   0.0    1
AJ243946|AJ243946.1 Dictyostelium discoideum ctsD gene for cathepsin D, exons 1 to 2.   636   0.0    2
AB106552|AB106552.1 Todarodes pacificus tpaD mRNA for cathepsin D, complete cds.    58   2e-06  2
AX059531|AX059531.1 Sequence 264 from Patent WO0055325.            62   6e-06  2
CB814835|CB814835.1 USDA-FP_100247 Adult Alate Brown Citrus Aphid Toxoptera citricida cDNA clone WHWTC-04_A10 5', mRNA sequence.    36   9e-06  3
AL762930|AL762930.1 Arabidopsis thaliana T-DNA flanking sequence GK-030C11-011522.    62   9e-06  1
BE525959|BE525959.1 M64C07STM Arabidopsis developing seed Arabidopsis thaliana cDNA clone 600034526R1 5', mRNA sequence.    62   9e-06  1
AL161500|AL161500.2 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 12.    62   9e-06  1
CD825453|CD825453.1 BN25.060N03F011129 BN25 Brassica napus cDNA clone BN25060N03, mRNA sequence.    62   9e-06  1
BX838383|BX838383.1 Arabidopsis thaliana Full-length cDNA 5PRIM end of clone  GSLTSIL89ZD03 of Silique of strain col-0 of Arabidopsis thaliana  (thale cress).    62   9e-06  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q03168) RecName: Full=Lysosomal aspartic protease;          EC=...   122   4e-27
AB106552_1(AB106552|pid:none) Todarodes pacificus tpaD mRNA for ...   120   2e-26
DQ010007_1(DQ010007|pid:none) Bombyx mori CathD mRNA, complete c...   119   3e-26
EF213114_1(EF213114|pid:none) Penaeus monodon cathepsin D mRNA, ...   118   7e-26
AB218595_1(AB218595|pid:none) Haemaphysalis longicornis AP mRNA ...   118   9e-26
EF070454_1(EF070454|pid:none) Maconellicoccus hirsutus clone WHM...   115   5e-25
(O93428) RecName: Full=Cathepsin D;          EC=3.4.23.5; Flags:...   115   6e-25
AF454831_1(AF454831|pid:none) Apriona germari cathepsin D mRNA, ...   114   1e-24
BT043515_1(BT043515|pid:none) Salmo salar clone HM4_0887 catheps...   112   5e-24
AJ007878_1(AJ007878|pid:none) Chionodraco hamatus mRNA for cathe...   112   5e-24

 psg: 0.86  gvh: 0.77  alm: 0.47  top: 0.60  tms: 0.00  mit: 0.32  mip: 0.10
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: extracellular, including cell wall
	 24.0 %: cytoplasmic
	 12.0 %: mitochondrial
	  8.0 %: cytoskeletal
	  8.0 %: vacuolar
	  4.0 %: nuclear

>> prediction for CHB751 is exc

>CHB751F.Seq
ATTTTTTATACATTAATTTTTTTTTAAAAAAAAATTATTTAATTTAAATTAACAAAGATT
TTGGCGCACAGATTTCAACAAAGATTTTTTTATTAATCAATTCCACATGATTCAATAAAG
GGGAAAATGAAATTACTTATTTTAACTTTATTTTTAGCTACTATTGTTTTAGCTCAAGCT
TTAACAGTACCATTAAACTTCCATCAAGCTTCAAGAGAATCTAGAAGAAGAGTTCCACAA
AAATGGTCAAACAGATTATCTGCTCTCAATGCTGGTACCACAATCCCAATTTCAGATTTT
GAAGATGCTCAATACTATGGTGCCATTACCATTGGTACCCCAGGTCAAGCCTTCAAAGTA
GTTTTCGATACTGGTTCATCCAACTTGTGGATTCCATCAAAGAAATGTCCAATCACTGTT
GTTGCATGTGATTTACATAACAAATATAACAGCGGTGCCTCAAGCACATATGTCGCCAAC
GGAACTGATTTCACCATCCAATACGGNNNNNNNNNN