>CHB392 (CHB392Q) /CSM/CH/CHB3-D/CHB392Q.Seq.d/
XXXXXXXXXXTAGAGGTAATCCAACTTGTATTAAAGCAAGACCACCGGTACCACCACCAC
ATTGCTCAACTTGTGCAGAGCTATCATCAGCATGTAATCACGTTGGAATGATTTGTATTC
AAGTACCAAGCAATTGAACCAATACTAGATTCCCATGTTGCCCATCTCATCCAATTTGTA
TTCATCCATCAACTACTGCTGCTTCAACCANTGCAACAACTGCATCAACTGTCGCAACTA
CAACCTCTGCAACTACTGCAGGTACAACAACTGGTGGAACTACAACTGGTGGTTCAACTT
CTGATAGTAGTGCTGCTTCCTCAGCCGATAGTAGCGCTGCCTCCTCATCACCATCAAGCA
GTGCTGCTTCAAGTGCCG

---eviqlvlkqdhryhhhiaqlvqsyhqhvitle*FVFKYQAIEPILDSHVAHLIQFVF
IHQLLLLQPXQQLHQLSQLQPLQLLQVQQLVELQLVVQLLIVVLLPQPIVALPPHHHQAV
LLQVP

Frame A:
---rgnptcikarppvppphcstcaelssacnhvgmiciqvpsn*tntrfpccpshpici
hpsttaastxattastvatttsattagtttggtttggstsdssaassadssaassspsss
aassa


Frame B:
---eviqlvlkqdhryhhhiaqlvqsyhqhvitle*FVFKYQAIEPILDSHVAHLIQFVF
IHQLLLLQPXQQLHQLSQLQPLQLLQVQQLVELQLVVQLLIVVLLPQPIVALPPHHHQAV
LLQVP


Frame C:
---r*snly*skttgttttllnlcraiism*srwndlysstkqlnqy*ipmlpissnlys
sinyccfnxcnncincrnynlcnycrynnwwnynwwfnf***ccflsr**rcllitikqc
cfkc

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHB392 (CHB392Q) /CSM/CH/CHB3-D/CHB392Q.Seq.d/                        724   0.0
VFN316 (VFN316Q) /CSM/VF/VFN3-A/VFN316Q.Seq.d/                        716   0.0
VFM702 (VFM702Q) /CSM/VF/VFM7-A/VFM702Q.Seq.d/                        716   0.0
VFA856 (VFA856Q) /CSM/VF/VFA8-C/VFA856Q.Seq.d/                        716   0.0
SSG603 (SSG603Q) /CSM/SS/SSG6-A/SSG603Q.Seq.d/                        716   0.0
SSG344 (SSG344Q) /CSM/SS/SSG3-B/SSG344Q.Seq.d/                        716   0.0
SSB232 (SSB232Q) /CSM/SS/SSB2-B/SSB232Q.Seq.d/                        716   0.0
SLG852 (SLG852Q) /CSM/SL/SLG8-C/SLG852Q.Seq.d/                        716   0.0
SLG851 (SLG851Q) /CSM/SL/SLG8-C/SLG851Q.Seq.d/                        716   0.0
SLG750 (SLG750Q) /CSM/SL/SLG7-C/SLG750Q.Seq.d/                        716   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

D13973|D13973.1 Dictyostelium discoideum DNA for Dp87 protein, complete cds.   716   0.0    1
BJ170760|BJ170760.1 Physcomitrella patens subsp. patens cDNA clone:pph26m16, 3' end, single read.   182   2e-42  1
BX284669|BX284669.3 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH211-280E18.    44   1.3    5
AC027658|AC027658.1 Oryza sativa subsp. japonica BAC nbxb0006I13, chromosome 10, complete sequence.    44   1.3    1
AE017095|AE017095.1 Oryza sativa (japonica cultivar-group) chromosome 10, section 49 of 77 of the complete sequence.    44   1.3    1
CB670885|CB670885.1 OSJNEe04D05.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA clone OSJNEe04D05 3', mRNA sequence.    44   1.3    1
CF324744|CF324744.1 JMT1--01-F20.g1 AtJMT-overexpressing transgenic rice lambda phage cDNA library (JMT1) Oryza sativa cDNA clone JMT1--01-F20, mRNA sequence.    44   1.3    1
AU068578|AU068578.1 Oryza sativa (japonica cultivar-group) cDNA, partial sequence (C30478_11Z).    44   1.3    1
CB628070|CB628070.1 ---.    44   1.3    1
CB682568|CB682568.1 OSJNEf10A23.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA clone OSJNEf10A23 3', mRNA sequence.    44   1.3    1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q04503) RecName: Full=Prespore protein Dp87; Flags: Precursor;       104   1e-21
D13973_1(D13973|pid:none) Dictyostelium discoideum gene for Dp87...   104   1e-21
AY484971_2(AY484971|pid:none) Homo sapiens type XVIII collagen g...    32   5.0
CP001096_3495(CP001096|pid:none) Rhodopseudomonas palustris TIE-...    32   8.6

 psg: 0.74  gvh: 0.63  alm: 0.23  top: 0.70  tms: 0.07  mit: 0.17  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.48  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 1.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 44.0 %: nuclear
	 28.0 %: cytoplasmic
	 12.0 %: mitochondrial
	  8.0 %: Golgi
	  4.0 %: vesicles of secretory system
	  4.0 %: endoplasmic reticulum

>> prediction for CHB392 is nuc

>CHB392Z.Seq
NNNNNNNNNNTAGAGGTAATCCAACTTGTATTAAAGCAAGACCACCGGTACCACCACCAC
ATTGCTCAACTTGTGCAGAGCTATCATCAGCATGTAATCACGTTGGAATGATTTGTATTC
AAGTACCAAGCAATTGAACCAATACTAGATTCCCATGTTGCCCATCTCATCCAATTTGTA
TTCATCCATCAACTACTGCTGCTTCAACCANTGCAACAACTGCATCAACTGTCGCAACTA
CAACCTCTGCAACTACTGCAGGTACAACAACTGGTGGAACTACAACTGGTGGTTCAACTT
CTGATAGTAGTGCTGCTTCCTCAGCCGATAGTAGCGCTGCCTCCTCATCACCATCAAGCA
GTGCTGCTTCAAGTGCCG