>CHA613 (CHA613Q) /CSM/CH/CHA6-A/CHA613Q.Seq.d/
AAATATTAAATCATTGTAGTATTTTGTTCATATTCAAATTAAATATCAATACAATTAAAA
AAAGTTAAAATTAAATTTGTAAAATCAATTTGTAACAAAAACTAGTAATTTAAAAAAAAA
AAAACCNAAAAAAAAAXXXXXXXXXX

ILNHCSILFIFKLNINTIKKS*n*ickinl*qklvi*kkknxkk---

Frame A:
ky*iivvfcsysn*isiqlkkvkikfvksicnkn**fkkkktxkk---


Frame B:
niksl*yfvhiqikyqyn*kklklnl*nqfvtktsnlkkkkpkk---


Frame C:
ILNHCSILFIFKLNINTIKKS*n*ickinl*qklvi*kkknxkk---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SLF326 (SLF326Q) /CSM/SL/SLF3-B/SLF326Q.Seq.d/                        178   1e-44
SHA483 (SHA483Q) /CSM/SH/SHA4-D/SHA483Q.Seq.d/                        178   1e-44
SFI660 (SFI660Q) /CSM/SF/SFI6-C/SFI660Q.Seq.d/                        178   1e-44
SFE832 (SFE832Q) /CSM/SF/SFE8-B/SFE832Q.Seq.d/                        178   1e-44
SFE258 (SFE258Q) /CSM/SF/SFE2-C/SFE258Q.Seq.d/                        178   1e-44
SFA760 (SFA760Q) /CSM/SF/SFA7-C/SFA760Q.Seq.d/                        178   1e-44
CHD817 (CHD817Q) /CSM/CH/CHD8-A/CHD817Q.Seq.d/                        178   1e-44
CHD178 (CHD178Q) /CSM/CH/CHD1-D/CHD178Q.Seq.d/                        178   1e-44
CHB757 (CHB757Q) /CSM/CH/CHB7-C/CHB757Q.Seq.d/                        178   1e-44
CHA613 (CHA613Q) /CSM/CH/CHA6-A/CHA613Q.Seq.d/                        178   1e-44

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

X51892|X51892.1 Dictyostelium discoideum SP60 gene for spore coat protein.   111   9e-38  2
X52105|X52105.1 Dictyostelium discoideum SP60 gene for spore coat protein.   103   2e-35  2
M34546|M34546.1 D.discoideum spore coat 60 (sp60) gene, 5' flank.   111   3e-21  1
M26239|M26239.1 D.discoideum spore coat protein SP60 gene, complete cds.    80   1e-11  1
AC014725|AC014725.1 Drosophila melanogaster, WORKING DRAFT SEQUENCE, in ordered pieces.    34   0.004  3
AC146572|AC146572.11 Medicago truncatula clone mth2-104c10, complete sequence.    34   0.006  6
AC011986|AC011986.3 Homo sapiens clone RP11-18M15, WORKING DRAFT SEQUENCE, 22 unordered pieces.    36   0.019  8
BX322622|BX322622.10 Zebrafish DNA sequence from clone DKEYP-14D3 in linkage group 8.    36   0.031  6
AE017339|AE017339.1 Mycoplasma mobile 163K section 3 of 3 of...    34   0.050  8
BV025443|BV025443.1 S212P6456FC5.T0 CZECHII/Ei Mus musculus STS genomic, sequence tagged site.    42   0.052  2

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3039690
Number of Hits to DB: 87,110,368

 psg: 0.92  gvh: 0.36  alm: 0.43  top: 0.63  tms: 0.00  mit: 0.39  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: mitochondrial
	 32.0 %: cytoplasmic
	 24.0 %: nuclear
	  8.0 %: vacuolar

>> prediction for CHA613 is mit

>CHA613F.Seq
AAATATTAAATCATTGTAGTATTTTGTTCATATTCAAATTAAATATCAATACAATTAAAA
AAAGTTAAAATTAAATTTGTAAAATCAATTTGTAACAAAAACTAGTAATTTAAAAAAAAA
AAAACCNAAAAAAAAANNNNNNNNNN