>CFK273 (CFK273Q) /CSM/CF/CFK2-D/CFK273Q.Seq.d/
XXXXXXXXXXTNTTATAAAAGATATGTTACATTAGAAACTATTAGAGATTTAAAAGAAAC
TTNTTGTANAGTTTTTGATACAAAGGATTTAGGTGAAGATATAAATATAGCNCAAGTACC
ATATGAATTGCCAGATGGTAATTTATTANAGATTGGTTCAGATAGATTTCAAATTCCTGA
ATTATTATTTAATCCAACNCCATTGAATGAACAAATTTTNAATAACAATAATAATAATAG
CAATGGTGAGAATACAACAACATCATCAGTTGTTCAACAACCNCAATATCAAGGATTAGG
AAGAATGATTATAGAATCATTANAGAAAAGTGATACAGATATTNGTAAAGAATTAATAAG
TAATTTAATTATAACTGGTGGTAATACATTATTTGCAGGTTTCCAAGAAAGATTAGTTAN
AGACATTTNTGAAATCTCTTATAATAAACCAAAAATCGTTGCAAATCAAACTGAAAAAAA
GAATTCAGTTTGGATTGGTGGTTCTGNTCTTGGTTCT

---YKRYVTLETIRDLKETXCXVFDTKDLGEDINIAQVPYELPDGNLLXIGSDRFQIPEL
LFNPTPLNEQIXNNNNNNSNGENTTTSSVVQQPQYQGLGRMIIESLXKSDTDIXKELISN
LIITGGNTLFAGFQERLVXDIXEISYNKPKIVANQTEKKNSVWIGGSXLGS

Frame A:
---xikdmlh*kllei*kklxvxfliqri*vki*i*xkyhmncqmviyxrlvqidfkfln
yyliqxh*mnkfxitiiiiamvriqqhhqlfnnxnikd*ee*l*nhxrkviqixvkn**v
i*l*lvvihylqvskkd*lxtfxksliinqkslqiklkkriqfglvvlxlv


Frame B:
---l*kicyirny*rfkrnxlxsf*ykgfr*rykysxsti*iarw*fixdwfr*isns*i
ii*snxie*tnfx*q****qw*eynniiscsttxisrirkndyriixek*yryx*rink*
fnynww*yiicrfprkisxrhx*nll**tknrcksn*kkefsldwwfxswf


Frame C:
---YKRYVTLETIRDLKETXCXVFDTKDLGEDINIAQVPYELPDGNLLXIGSDRFQIPEL
LFNPTPLNEQIXNNNNNNSNGENTTTSSVVQQPQYQGLGRMIIESLXKSDTDIXKELISN
LIITGGNTLFAGFQERLVXDIXEISYNKPKIVANQTEKKNSVWIGGSXLGS

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CFK273 (CFK273Q) /CSM/CF/CFK2-D/CFK273Q.Seq.d/                        888   0.0
SFL243 (SFL243Q) /CSM/SF/SFL2-B/SFL243Q.Seq.d/                        878   0.0
CFH524 (CFH524Q) /CSM/CF/CFH5-A/CFH524Q.Seq.d/                        866   0.0
SFB730 (SFB730Q) /CSM/SF/SFB7-B/SFB730Q.Seq.d/                        862   0.0
SFC783 (SFC783Q) /CSM/SF/SFC7-D/SFC783Q.Seq.d/                        856   0.0
SFF737 (SFF737Q) /CSM/SF/SFF7-B/SFF737Q.Seq.d/                        850   0.0
AFG296 (AFG296Q) /CSM/AF/AFG2-D/AFG296Q.Seq.d/                        850   0.0
AFM734 (AFM734Q) /CSM/AF/AFM7-B/AFM734Q.Seq.d/                        844   0.0
AFL224 (AFL224Q) /CSM/AF/AFL2-A/AFL224Q.Seq.d/                        745   0.0
AFA162 (AFA162Q) /CSM/AF/AFA1-C/AFA162Q.Seq.d/                        607   e-173

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC116977|AC116977.2 Dictyostelium discoideum chromosome 2 map 5515173-5817331 strain AX4, complete sequence.    40   3e-06  5
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence.    44   9e-06  5
AE014826|AE014826.1 Plasmodium falciparum 3D7 chromosome 14 section 11 of 13 of the complete sequence.    38   2e-05  12
AL844509|AL844509.1 Plasmodium falciparum chromosome 13.           42   7e-05  6
AE014838|AE014838.1 Plasmodium falciparum 3D7 chromosome 11 section 3 of 8 of the complete sequence.    38   8e-05  9
AC117176|AC117176.2 Dictyostelium discoideum chromosome 2 map 5018074-5200947 strain AX4, complete sequence.    40   9e-05  4
AC115594|AC115594.2 Dictyostelium discoideum chromosome 2 map 4071862-4101005 strain AX4, complete sequence.    48   1e-04  3
AC115606|AC115606.2 Dictyostelium discoideum chromosome 2 map 159760-209066 strain AX4, complete sequence.    38   1e-04  5
AC115581|AC115581.2 Dictyostelium discoideum chromosome 2 map 5817431-5836155 strain AX4, complete sequence.    38   1e-04  5
AL772396|AL772396.7 Zebrafish DNA sequence from clone CH211-253F14.    38   2e-04  6

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT038602_1(BT038602|pid:none) Zea mays full-length cDNA clone ZM...   100   2e-20
(Q84M92) RecName: Full=Actin-related protein 4;  &AK228098_1(AK2...   100   4e-20
AY087788_1(AY087788|pid:none) Arabidopsis thaliana clone 38419 m...    99   5e-20
AC152123_6(AC152123|pid:none) Genomic sequence for broccoli [Bra...    99   5e-20
DQ980427_1(DQ980427|pid:none) Peridinium limbatum clone plactin2...    97   2e-19
AY345907_1(AY345907|pid:none) Karlodinium micrum actin gene, par...    96   4e-19
DQ980429_1(DQ980429|pid:none) Peridinium limbatum clone plactin2...    96   4e-19
EF134084_1(EF134084|pid:none) Karlodinium micrum strain CCMP1975...    96   4e-19
EU742856_1(EU742856|pid:none) Karlodinium veneficum strain CCMP2...    96   4e-19
EU742772_1(EU742772|pid:none) Amphidinium carterae strain CCMP13...    96   4e-19

 psg: 0.55  gvh: 0.23  alm: 0.40  top: 0.53  tms: 0.00  mit: 0.32  mip: 0.02
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: cytoplasmic
	 36.0 %: nuclear
	 12.0 %: cytoskeletal
	 12.0 %: mitochondrial
	  4.0 %: extracellular, including cell wall

>> prediction for CFK273 is cyt

>CFK273Z.Seq
NNNNNNNNNNTNTTATAAAAGATATGTTACATTAGAAACTATTAGAGATTTAAAAGAAAC
TTNTTGTANAGTTTTTGATACAAAGGATTTAGGTGAAGATATAAATATAGCNCAAGTACC
ATATGAATTGCCAGATGGTAATTTATTANAGATTGGTTCAGATAGATTTCAAATTCCTGA
ATTATTATTTAATCCAACNCCATTGAATGAACAAATTTTNAATAACAATAATAATAATAG
CAATGGTGAGAATACAACAACATCATCAGTTGTTCAACAACCNCAATATCAAGGATTAGG
AAGAATGATTATAGAATCATTANAGAAAAGTGATACAGATATTNGTAAAGAATTAATAAG
TAATTTAATTATAACTGGTGGTAATACATTATTTGCAGGTTTCCAAGAAAGATTAGTTAN
AGACATTTNTGAAATCTCTTATAATAAACCAAAAATCGTTGCAAATCAAACTGAAAAAAA
GAATTCAGTTTGGATTGGTGGTTCTGNTCTTGGTTCT