>CFJ203 (CFJ203Q) /CSM/CF/CFJ2-A/CFJ203Q.Seq.d/
ACAACTCCCAAATCCTTTTTCACTACAACCACTTTGTTTATTTTTTATTATTTTATTTTT
TTAATTATTTTTATTATTTATTATTTATCATAAATTATTTAATTAATATATTGTTTGTTT
AAAAAAAACAAAACCAATTAAAATGAATACAATTTATAAAACTCTTTGCTCACCAAAAAA
ATTTATAATTGGAAAGAATTTATTAAATGATCCTTCAAAATTTATTAAAGATTTTGGAAA
TAAATGTTTTATTGTTTGTGATGAGAGATTAATTGATCAAGTAAATCAAAAAACTGTAAA
GTCTTTAGAAAAAGAGAATATTATATCTCACGTTGAAAAATTTAAAATTGAATGTNCAAA
AAATGAAGTTGAAAGAATGTGTTCAATTAAAAAATCTAAAGGTTCAAATGTAATTTTAGG
AATTGGTGGTGGTAAAACGATTGATACTGCAAAAGCAATGGCATTTTATGAAAAATGTCC
AGTAGTAATATTTCCAACAGCAGCATCAACTGATGCACCATGTACATCATTAGCAGTTTT
ATACAAAGATAATGGXXXXXXXXXXAGTTGTTATGGTTACTGCACCACCAAGATTATTTT
CTTCAGGAGTAGGTGATGCACTTGCAACTTATTTTGAAGCAAGACAATGTTTCCAAAGTT
TTGGAAATAATTTAACCAATACAAAACCATCATTGATTGGATATAACCTTTCAAAATTAT
GCTATAAAATCATAAGTGAAAATATTGAAAAAGCAATGGATTCTTTAAATTGTAAATCAA
ATTCAATTTCATTTGAAAATATTTTAGAAGCAACAATTTATTTAAGTGGTATTGGGGCAG
AGAGTGGAGGACTTGCTGCTGCCCATGCAATTTCCAATGGTCTAAGTTCAATAGAACAAT
TACATTCCTCTCAACATGGTGAAAAGGTTGCATTTGGTTTATTGGCTCAATTGATTTTAG
AAGATGCTCCAACTGGAGAAATTGAAAATGTAATTAGAATAATGAAAATTGCAAAACTTC
CGATGACATTAGAGGATTTAGGTTATAAAAATTGGAATGATGAAGATATTAAAAAAGTGG
CTTCAATTTCAAATTTACCATCAGATACAATGTCAAACATGTTAAGAAACTTTGAAAATG
ATGATATCTTTAATTCAATTGTGGCTGCAAATGAAATGGGTAAAAGATATAAAAAAATAT
CAATAGAAAATTTAAAACCAAATTATCCAATTTAAAATTCTTTCAAT

qlpnpfslqplclffiilff*lfllfiiyhklfn*YIVCLKKTKPIKMNTIYKTLCSPKK
FIIGKNLLNDPSKFIKDFGNKCFIVCDERLIDQVNQKTVKSLEKENIISHVEKFKIECXK
NEVERMCSIKKSKGSNVILGIGGGKTIDTAKAMAFYEKCPVVIFPTAASTDAPCTSLAVL
YKDN---

---VVMVTAPPRLFSSGVGDALATYFEARQCFQSFGNNLTNTKPSLIGYNLSKLCYKIIS
ENIEKAMDSLNCKSNSISFENILEATIYLSGIGAESGGLAAAHAISNGLSSIEQLHSSQH
GEKVAFGLLAQLILEDAPTGEIENVIRIMKIAKLPMTLEDLGYKNWNDEDIKKVASISNL
PSDTMSNMLRNFENDDIFNSIVAANEMGKRYKKISIENLKPNYPI*nsfn

Frame A:
ttpksffttttlfifyyfifliifiiyyls*ii*liyclfkknktn*neynl*nslltkk
iynwkefik*sfkiy*rfwk*mfycl**ein*ssksknckvfrkreyyisr*ki*n*mxk
k*s*knvfn*ki*rfkcnfrnwww*nd*ycksngil*kmsssnisnssin*ctmyiissf
iqr*w---

---scygycttkiiffrsr*ctcnlf*sktmfpkfwk*fnqyktiidwi*pfkiml*nhk
*ky*ksngffkl*ikfnfi*kyfrsnnlfkwywgrewrtcccpcnfqwskfnrtitflst
w*kgciwfigsidfrrcsnwrn*kcn*nnencktsddirgfrl*kle**ry*ksgfnfkf
tirynvkhvkkl*k**yl*fncgck*ng*ki*kninrkfktklsnlkffq

Frame B:
qlpnpfslqplclffiilff*lfllfiiyhklfn*YIVCLKKTKPIKMNTIYKTLCSPKK
FIIGKNLLNDPSKFIKDFGNKCFIVCDERLIDQVNQKTVKSLEKENIISHVEKFKIECXK
NEVERMCSIKKSKGSNVILGIGGGKTIDTAKAMAFYEKCPVVIFPTAASTDAPCTSLAVL
YKDN---

---VVMVTAPPRLFSSGVGDALATYFEARQCFQSFGNNLTNTKPSLIGYNLSKLCYKIIS
ENIEKAMDSLNCKSNSISFENILEATIYLSGIGAESGGLAAAHAISNGLSSIEQLHSSQH
GEKVAFGLLAQLILEDAPTGEIENVIRIMKIAKLPMTLEDLGYKNWNDEDIKKVASISNL
PSDTMSNMLRNFENDDIFNSIVAANEMGKRYKKISIENLKPNYPI*nsfn

Frame C:
nsqilfhynhfvyfllfyffnyfyyllfiinylinilfv*kkqnqlk*iqfiklfahqkn
l*leriy*milqnllkileinvllfvmrd*lik*ikkl*sl*kkrilyltlknlklnvqk
mklkecvqlknlkvqm*f*elvvvkrlilqkqwhfmknvq**yfqqqhqlmhhvhh*qfy
tkim---

---llwllhhqdyflqe*vmhlqlilkqdnvskvleii*piqnhh*lditfqnyaiks*v
kilkkqwil*ivnqiqfhlkif*kqqfi*vvlgqrvedlllpmqfpmv*vq*nnyiplnm
vkrlhlvywln*f*kmlqleklkm*le**klqnfr*h*ri*vikigmmkilkkwlqfqiy
hqiqcqtc*etlkmmisliqlwlqmkwvkdikkyq*ki*nqiiqfkils

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CFJ203 (CFJ203Q) /CSM/CF/CFJ2-A/CFJ203Q.Seq.d/                       2101   0.0
CFG510 (CFG510Q) /CSM/CF/CFG5-A/CFG510Q.Seq.d/                       1310   0.0
CFF833 (CFF833Q) /CSM/CF/CFF8-B/CFF833Q.Seq.d/                       1310   0.0
CFF396 (CFF396Q) /CSM/CF/CFF3-D/CFF396Q.Seq.d/                       1304   0.0
CFK417 (CFK417Q) /CSM/CF/CFK4-A/CFK417Q.Seq.d/                       1296   0.0
CFF691 (CFF691Q) /CSM/CF/CFF6-D/CFF691Q.Seq.d/                       1289   0.0
CHB806 (CHB806Q) /CSM/CH/CHB8-A/CHB806Q.Seq.d/                       1281   0.0
CHD547 (CHD547Q) /CSM/CH/CHD5-B/CHD547Q.Seq.d/                       1045   0.0
CHA247 (CHA247Q) /CSM/CH/CHA2-B/CHA247Q.Seq.d/                        775   0.0
VSH482 (VSH482Q) /CSM/VS/VSH4-D/VSH482Q.Seq.d/                         42   0.020

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC116330|AC116330.2 Dictyostelium discoideum chromosome 2 map 3191214-3323468 strain AX4, complete sequence.  1239   0.0    16
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence.    36   7e-11  29
AC116977|AC116977.2 Dictyostelium discoideum chromosome 2 map 5515173-5817331 strain AX4, complete sequence.    34   2e-09  22
AL844509|AL844509.1 Plasmodium falciparum chromosome 13.           38   2e-09  29
AL445564|AL445564.1 Mycoplasma pulmonis (strain UAB CTIP) complete genome; segment 2/3.    34   2e-09  24
AE015937|AE015937.1 Clostridium tetani E88, section 2 of 10 of the complete genome.    42   5e-09  19
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence.    32   8e-09  24
AB063522|AB063522.2 Wigglesworthia brevipalpis DNA, complete genome, section 2/2.    34   1e-08  19
AB063521|AB063521.2 Wigglesworthia brevipalpis DNA, complete genome, section 1/2.    36   3e-08  25
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence.    32   1e-07  24

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116330_35(AC116330|pid:none) Dictyostelium discoideum chromoso...   437   0.0
CP000563_3296(CP000563|pid:none) Shewanella baltica OS155, compl...   235   e-101
CP000753_965(CP000753|pid:none) Shewanella baltica OS185, comple...   237   e-100
CP000503_994(CP000503|pid:none) Shewanella sp. W3-18-1, complete...   233   3e-99
AM942759_2742(AM942759|pid:none) Proteus mirabilis strain HI4320...   237   9e-98
CP000644_2108(CP000644|pid:none) Aeromonas salmonicida subsp. sa...   226   1e-93
AE017333_772(AE017333|pid:none) Bacillus licheniformis DSM 13, c...   215   6e-93
CP000939_1937(CP000939|pid:none) Clostridium botulinum B1 str. O...   167   7e-67
AM412317_1988(AM412317|pid:none) Clostridium botulinum A str. AT...   166   4e-66
CP001078_882(CP001078|pid:none) Clostridium botulinum E3 str. Al...   167   3e-64

 psg: 0.72  gvh: 0.37  alm: 0.43  top: 0.53  tms: 0.00  mit: 0.32  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: cytoplasmic
	 32.0 %: nuclear
	 16.0 %: mitochondrial
	  4.0 %: plasma membrane
	  4.0 %: vesicles of secretory system
	  4.0 %: peroxisomal

>> prediction for CFJ203 is cyt

>CFJ203F.Seq
ACAACTCCCAAATCCTTTTTCACTACAACCACTTTGTTTATTTTTTATTATTTTATTTTT
TTAATTATTTTTATTATTTATTATTTATCATAAATTATTTAATTAATATATTGTTTGTTT
AAAAAAAACAAAACCAATTAAAATGAATACAATTTATAAAACTCTTTGCTCACCAAAAAA
ATTTATAATTGGAAAGAATTTATTAAATGATCCTTCAAAATTTATTAAAGATTTTGGAAA
TAAATGTTTTATTGTTTGTGATGAGAGATTAATTGATCAAGTAAATCAAAAAACTGTAAA
GTCTTTAGAAAAAGAGAATATTATATCTCACGTTGAAAAATTTAAAATTGAATGTNCAAA
AAATGAAGTTGAAAGAATGTGTTCAATTAAAAAATCTAAAGGTTCAAATGTAATTTTAGG
AATTGGTGGTGGTAAAACGATTGATACTGCAAAAGCAATGGCATTTTATGAAAAATGTCC
AGTAGTAATATTTCCAACAGCAGCATCAACTGATGCACCATGTACATCATTAGCAGTTTT
ATACAAAGATAATGGNNNNNNNNNN

>CFJ203Z.Seq
NNNNNNNNNNAGTTGTTATGGTTACTGCACCACCAAGATTATTTTCTTCAGGAGTAGGTG
ATGCACTTGCAACTTATTTTGAAGCAAGACAATGTTTCCAAAGTTTTGGAAATAATTTAA
CCAATACAAAACCATCATTGATTGGATATAACCTTTCAAAATTATGCTATAAAATCATAA
GTGAAAATATTGAAAAAGCAATGGATTCTTTAAATTGTAAATCAAATTCAATTTCATTTG
AAAATATTTTAGAAGCAACAATTTATTTAAGTGGTATTGGGGCAGAGAGTGGAGGACTTG
CTGCTGCCCATGCAATTTCCAATGGTCTAAGTTCAATAGAACAATTACATTCCTCTCAAC
ATGGTGAAAAGGTTGCATTTGGTTTATTGGCTCAATTGATTTTAGAAGATGCTCCAACTG
GAGAAATTGAAAATGTAATTAGAATAATGAAAATTGCAAAACTTCCGATGACATTAGAGG
ATTTAGGTTATAAAAATTGGAATGATGAAGATATTAAAAAAGTGGCTTCAATTTCAAATT
TACCATCAGATACAATGTCAAACATGTTAAGAAACTTTGAAAATGATGATATCTTTAATT
CAATTGTGGCTGCAAATGAAATGGGTAAAAGATATAAAAAAATATCAATAGAAAATTTAA
AACCAAATTATCCAATTTAAAATTCTTTCAAT

>CFJ203P.Seq
ACAACTCCCAAATCCTTTTTCACTACAACCACTTTGTTTATTTTTTATTATTTTATTTTT
TTAATTATTTTTATTATTTATTATTTATCATAAATTATTTAATTAATATATTGTTTGTTT
AAAAAAAACAAAACCAATTAAAATGAATACAATTTATAAAACTCTTTGCTCACCAAAAAA
ATTTATAATTGGAAAGAATTTATTAAATGATCCTTCAAAATTTATTAAAGATTTTGGAAA
TAAATGTTTTATTGTTTGTGATGAGAGATTAATTGATCAAGTAAATCAAAAAACTGTAAA
GTCTTTAGAAAAAGAGAATATTATATCTCACGTTGAAAAATTTAAAATTGAATGTNCAAA
AAATGAAGTTGAAAGAATGTGTTCAATTAAAAAATCTAAAGGTTCAAATGTAATTTTAGG
AATTGGTGGTGGTAAAACGATTGATACTGCAAAAGCAATGGCATTTTATGAAAAATGTCC
AGTAGTAATATTTCCAACAGCAGCATCAACTGATGCACCATGTACATCATTAGCAGTTTT
ATACAAAGATAATGG----------AGTTGTTATGGTTACTGCACCACCAAGATTATTTT
CTTCAGGAGTAGGTGATGCACTTGCAACTTATTTTGAAGCAAGACAATGTTTCCAAAGTT
TTGGAAATAATTTAACCAATACAAAACCATCATTGATTGGATATAACCTTTCAAAATTAT
GCTATAAAATCATAAGTGAAAATATTGAAAAAGCAATGGATTCTTTAAATTGTAAATCAA
ATTCAATTTCATTTGAAAATATTTTAGAAGCAACAATTTATTTAAGTGGTATTGGGGCAG
AGAGTGGAGGACTTGCTGCTGCCCATGCAATTTCCAATGGTCTAAGTTCAATAGAACAAT
TACATTCCTCTCAACATGGTGAAAAGGTTGCATTTGGTTTATTGGCTCAATTGATTTTAG
AAGATGCTCCAACTGGAGAAATTGAAAATGTAATTAGAATAATGAAAATTGCAAAACTTC
CGATGACATTAGAGGATTTAGGTTATAAAAATTGGAATGATGAAGATATTAAAAAAGTGG
CTTCAATTTCAAATTTACCATCAGATACAATGTCAAACATGTTAAGAAACTTTGAAAATG
ATGATATCTTTAATTCAATTGTGGCTGCAAATGAAATGGGTAAAAGATATAAAAAAATAT
CAATAGAAAATTTAAAACCAAATTATCCAATTTAAAATTCTTTCAAT