>CFI885 (CFI885Q) /CSM/CF/CFI8-D/CFI885Q.Seq.d/
ATTTGGGAAAAATAAATAAATAAATAAATAAATATGTCAGCTCCAGTTTTAACCACCAGT
AGTGGTTCACCAATTGATAACAATTTAAACTCAATGACCGCAGGTGTTAATGGTCCAATT
TTAATTCAAGATTTCACTTTAATTGATAAACTTGCTCATTTCGATCGTGAACGTATCCCA
GAACGTGTTGTACATGCTAAAGGTGCTGGTGCCCATGGTTATTTCGAAGTTACCTCAAGT
GATGTACCAAAATGGTGTAAAGCTAAATTCTTAAATAAAGTTGGTAAGAGAACACCAATC
TTCACCCGTTTCTCTACTGTTGGTGGTGAAAAAGGTTCATCCGATTCTGAAAGAGATCCA
AGAGGTTTCGCTGTCAAATTTTATACTGAAGAAGGTAACTTTGATATGGTCGGTAATAAT
ACTCCAGTTTTCTTTATTCGTGATCCATCAAAATTCCCAGATTTCATTCATACACAAAAA
CGTAATCCACAAACAAATTGTAAAGATCCAAATATGTTTTGGGATTTTTTAGGTCAAACA
CCAGAATCAACACATCAAGTATCAATTTTATTCTCTGATAGAGGTACACCAAAATCATAT
CGTCATATGCATGGTTTCTCATCACATACCTTAAAATTTGTTAATGCTCAAGXXXXXXXX
XXAAGTTTCCATTCAATTGATGGAATTTGAAGATGCCTTAAAGTATCGTTTCAATCCATT
CGATGTAACAAAGATTTGGTCACACAAAGACTATCCATTAATTCAAATTGGTCGTATGGT
TTTGAATCGTAATCCAGAGAATTACTTTGCTGAAGTTGAACAAGCTGCCTTCTCACCATC
CCACATGGTTCCAGGTATTGAACCATCACCAGATAAGATGTTACAAGGTCGTCTCTTCTC
TTATCCAGATACTCATCGTCATCGTTTAGGTGTAAACTATCAACAAATCCCAGTCAATTG
TCCATTCGCCGTAAAGGGTGGTGTTAAAAACTACCAACGTGATGGTTTCATGGCTGTCAA
TGGTAATGGTGGTAAAGGTCCAAACTATCAACCAAACTCTTTCGGTGGTCCAGAGCCACA
TCCAGAATTTGCTCAACATAAATTTGACGTCTCTGGTTTCGCTGCTCGTCAACCATACAA
TCATCCAAATGACGACTTTGTTCAACCAGGTGATTTATATAGACTCATGTCTGAAGATGC
CAAATCTCGTTTCGTCTCTAATTTAGTCGGTCACATGTCCGGTGTCACCATCAAAGAAAT
TCAAGTTCGTGCCGTTTCAAACTTTTACAAGGCTGACAAAGATTTAGGTGCTCGTTTATG
TAAGGGTCTTGGTATTGATGTTAATGATGTCATCAAATTCGCTGCTAGATCAAACTTGTA
AATCAATATA

iwek*ink*INMSAPVLTTSSGSPIDNNLNSMTAGVNGPILIQDFTLIDKLAHFDRERIP
ERVVHAKGAGAHGYFEVTSSDVPKWCKAKFLNKVGKRTPIFTRFSTVGGEKGSSDSERDP
RGFAVKFYTEEGNFDMVGNNTPVFFIRDPSKFPDFIHTQKRNPQTNCKDPNMFWDFLGQT
PESTHQVSILFSDRGTPKSYRHMHGFSSHTLKFVNAQ---

---VSIQLMEFEDALKYRFNPFDVTKIWSHKDYPLIQIGRMVLNRNPENYFAEVEQAAFS
PSHMVPGIEPSPDKMLQGRLFSYPDTHRHRLGVNYQQIPVNCPFAVKGGVKNYQRDGFMA
VNGNGGKGPNYQPNSFGGPEPHPEFAQHKFDVSGFAARQPYNHPNDDFVQPGDLYRLMSE
DAKSRFVSNLVGHMSGVTIKEIQVRAVSNFYKADKDLGARLCKGLGIDVNDVIKFAARSN
L*ini

Frame A:
iwek*ink*INMSAPVLTTSSGSPIDNNLNSMTAGVNGPILIQDFTLIDKLAHFDRERIP
ERVVHAKGAGAHGYFEVTSSDVPKWCKAKFLNKVGKRTPIFTRFSTVGGEKGSSDSERDP
RGFAVKFYTEEGNFDMVGNNTPVFFIRDPSKFPDFIHTQKRNPQTNCKDPNMFWDFLGQT
PESTHQVSILFSDRGTPKSYRHMHGFSSHTLKFVNAQ---

---kfpfn*wnlkmp*sivsihsm*qrfghtktih*fklvvwf*iviqritllklnklps
hhptwfqvlnhhqircykvvssliqiliviv*v*tinksqsivhsp*rvvlkttnvmvsw
lsmvmvvkvqtinqtlsvvqshiqnllninltslvsllvnhtiiqmttlfnqviyidscl
kmpnlvssli*svtcpvspskkfkfvpfqtftrltki*vlvyvrvlvlmlmmssnslldq
tcksi

Frame B:
fgknk*ink*icqlqf*ppvvvhqliti*tq*pqvlmvqf*fkisl*linllisivnvsq
nvlymlkvlvpmvisklpqvmyqngvklns*iklvrehqsspvslllvvkkvhpilkeiq
evslsnfilkkvtliwsviilqfslfvihqnsqisfihknvihkqivkiqicfgif*vkh
qnqhikyqfyslievhqnhivicmvshhip*nllmlk---

---sfhsidgi*rclkvsfqsircnkdlvtqrlsinsnwsygfes*srellc*s*tscll
tiphgsry*titr*dvtrsslllsryssssfrcklstnpsqlsirrkgwc*klpt*wfhg
cqw*ww*rsklstklfrwsratsricst*i*rlwfrcsstiqssk*rlcstr*fi*thv*
rcqisfrl*fsrshvrchhqrnssscrfkllqg*qrfrcsfm*gswy*c**chqirc*ik
lvnqy

Frame C:
lgkink*inkyvsssfnhq*wftn**qfklndrrc*wsnfnsrfhfn**tcsfrs*typr
tcctc*rcwcpwlfrsylk*ctkmv*s*ilk*sw*entnlhpflycww*krfirf*krsk
rfrcqily*rr*l*ygr**yssflys*sikiprfhsytkt*stnkl*rskyvlgffrsnt
rintssinfil**rytkiissyawflitylkic*cs---

---VSIQLMEFEDALKYRFNPFDVTKIWSHKDYPLIQIGRMVLNRNPENYFAEVEQAAFS
PSHMVPGIEPSPDKMLQGRLFSYPDTHRHRLGVNYQQIPVNCPFAVKGGVKNYQRDGFMA
VNGNGGKGPNYQPNSFGGPEPHPEFAQHKFDVSGFAARQPYNHPNDDFVQPGDLYRLMSE
DAKSRFVSNLVGHMSGVTIKEIQVRAVSNFYKADKDLGARLCKGLGIDVNDVIKFAARSN
L*ini

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CFI885 (CFI885Q) /CSM/CF/CFI8-D/CFI885Q.Seq.d/                       2629   0.0
SFJ685 (SFJ685Q) /CSM/SF/SFJ6-D/SFJ685Q.Seq.d/                       1443   0.0
FC-142 (FC-142Q) /CSM/CG/CG-FC/FC-142Q.Seq.d/                        1443   0.0
AFE580 (AFE580Q) /CSM/AF/AFE5-D/AFE580Q.Seq.d/                       1443   0.0
CFC537 (CFC537Q) /CSM/CF/CFC5-B/CFC537Q.Seq.d/                       1441   0.0
SFK640 (SFK640Q) /CSM/SF/SFK6-B/SFK640Q.Seq.d/                       1439   0.0
CFF134 (CFF134Q) /CSM/CF/CFF1-B/CFF134Q.Seq.d/                       1437   0.0
AFN369 (AFN369Q) /CSM/AF/AFN3-C/AFN369Q.Seq.d/                       1437   0.0
AFM195 (AFM195Q) /CSM/AF/AFM1-D/AFM195Q.Seq.d/                       1437   0.0
AFG841 (AFG841Q) /CSM/AF/AFG8-B/AFG841Q.Seq.d/                       1437   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AF090443|AF090443.1 Dictyostelium discoideum catalase (cat) mRNA, complete cds.  1443   0.0    1
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4, complete sequence.  1443   0.0    12
AB064338|AB064338.1 Candida boidinii CTA1 gene for peroxisomal catalase, complete cds.   111   1e-64  7
E65314|E65314.1 Novel catalase, gene of said catalase and composition containing  said  catalase, and process for preparing catalase using the genetic engineering  technology.    86   9e-33  4
AP004595|AP004595.1 Oceanobacillus iheyensis genomic DNA, section 3/13.    72   3e-32  10
AX536932|AX536932.1 Sequence 533 from Patent WO02064766.          101   6e-29  3
AJ400964|AJ400964.1 Proteus mirabilis ORF1 DNA, katA gene and menE gene, wild type.    76   3e-27  3
AJ400965|AJ400965.1 Proteus mirabilis ORF1 DNA, katA gene and menE gene, strain PR.    76   3e-27  3
AB006327|AB006327.1 Candida albicans mRNA for catalase, complete cds.    94   2e-26  3
U40704|U40704.1 Candida albicans catalase (Cat) gene, complete cds.    86   3e-26  3

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF090443_1(AF090443|pid:none) Dictyostelium discoideum catalase ...   497   e-139
CP001298_300(CP001298|pid:none) Methylobacterium chloromethanicu...   256   e-127
CP001029_347(CP001029|pid:none) Methylobacterium populi BJ001, c...   258   e-126
L48340_1(L48340|pid:none) Methylobacterium extorquens catalase (...   241   e-121
Z70679_1(Z70679|pid:none) H.pylori katA gene.                         265   e-120
DQ333889_1(DQ333889|pid:none) Helicobacter pylori strain NCTC 11...   265   e-120
U67458_1(U67458|pid:none) Helicobacter pylori catalase (katA) ge...   261   e-119
AE016825_3549(AE016825|pid:none) Chromobacterium violaceum ATCC ...   256   e-118
CR555306_1160(CR555306|pid:none) Azoarcus sp. EbN1 complete geno...   254   e-117
CP000910_829(CP000910|pid:none) Renibacterium salmoninarum ATCC ...   234   e-113

 psg: 0.89  gvh: 0.57  alm: 0.44  top: 0.40  tms: 0.00  mit: 0.31  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 28.0 %: cytoplasmic
	 28.0 %: nuclear
	 20.0 %: extracellular, including cell wall
	 16.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: vacuolar

>> prediction for CFI885 is cyt

>CFI885F.Seq
ATTTGGGAAAAATAAATAAATAAATAAATAAATATGTCAGCTCCAGTTTTAACCACCAGT
AGTGGTTCACCAATTGATAACAATTTAAACTCAATGACCGCAGGTGTTAATGGTCCAATT
TTAATTCAAGATTTCACTTTAATTGATAAACTTGCTCATTTCGATCGTGAACGTATCCCA
GAACGTGTTGTACATGCTAAAGGTGCTGGTGCCCATGGTTATTTCGAAGTTACCTCAAGT
GATGTACCAAAATGGTGTAAAGCTAAATTCTTAAATAAAGTTGGTAAGAGAACACCAATC
TTCACCCGTTTCTCTACTGTTGGTGGTGAAAAAGGTTCATCCGATTCTGAAAGAGATCCA
AGAGGTTTCGCTGTCAAATTTTATACTGAAGAAGGTAACTTTGATATGGTCGGTAATAAT
ACTCCAGTTTTCTTTATTCGTGATCCATCAAAATTCCCAGATTTCATTCATACACAAAAA
CGTAATCCACAAACAAATTGTAAAGATCCAAATATGTTTTGGGATTTTTTAGGTCAAACA
CCAGAATCAACACATCAAGTATCAATTTTATTCTCTGATAGAGGTACACCAAAATCATAT
CGTCATATGCATGGTTTCTCATCACATACCTTAAAATTTGTTAATGCTCAAGNNNNNNNN
NN

>CFI885Z.Seq
NNNNNNNNNNAAGTTTCCATTCAATTGATGGAATTTGAAGATGCCTTAAAGTATCGTTTC
AATCCATTCGATGTAACAAAGATTTGGTCACACAAAGACTATCCATTAATTCAAATTGGT
CGTATGGTTTTGAATCGTAATCCAGAGAATTACTTTGCTGAAGTTGAACAAGCTGCCTTC
TCACCATCCCACATGGTTCCAGGTATTGAACCATCACCAGATAAGATGTTACAAGGTCGT
CTCTTCTCTTATCCAGATACTCATCGTCATCGTTTAGGTGTAAACTATCAACAAATCCCA
GTCAATTGTCCATTCGCCGTAAAGGGTGGTGTTAAAAACTACCAACGTGATGGTTTCATG
GCTGTCAATGGTAATGGTGGTAAAGGTCCAAACTATCAACCAAACTCTTTCGGTGGTCCA
GAGCCACATCCAGAATTTGCTCAACATAAATTTGACGTCTCTGGTTTCGCTGCTCGTCAA
CCATACAATCATCCAAATGACGACTTTGTTCAACCAGGTGATTTATATAGACTCATGTCT
GAAGATGCCAAATCTCGTTTCGTCTCTAATTTAGTCGGTCACATGTCCGGTGTCACCATC
AAAGAAATTCAAGTTCGTGCCGTTTCAAACTTTTACAAGGCTGACAAAGATTTAGGTGCT
CGTTTATGTAAGGGTCTTGGTATTGATGTTAATGATGTCATCAAATTCGCTGCTAGATCA
AACTTGTAAATCAATATA

>CFI885P.Seq
ATTTGGGAAAAATAAATAAATAAATAAATAAATATGTCAGCTCCAGTTTTAACCACCAGT
AGTGGTTCACCAATTGATAACAATTTAAACTCAATGACCGCAGGTGTTAATGGTCCAATT
TTAATTCAAGATTTCACTTTAATTGATAAACTTGCTCATTTCGATCGTGAACGTATCCCA
GAACGTGTTGTACATGCTAAAGGTGCTGGTGCCCATGGTTATTTCGAAGTTACCTCAAGT
GATGTACCAAAATGGTGTAAAGCTAAATTCTTAAATAAAGTTGGTAAGAGAACACCAATC
TTCACCCGTTTCTCTACTGTTGGTGGTGAAAAAGGTTCATCCGATTCTGAAAGAGATCCA
AGAGGTTTCGCTGTCAAATTTTATACTGAAGAAGGTAACTTTGATATGGTCGGTAATAAT
ACTCCAGTTTTCTTTATTCGTGATCCATCAAAATTCCCAGATTTCATTCATACACAAAAA
CGTAATCCACAAACAAATTGTAAAGATCCAAATATGTTTTGGGATTTTTTAGGTCAAACA
CCAGAATCAACACATCAAGTATCAATTTTATTCTCTGATAGAGGTACACCAAAATCATAT
CGTCATATGCATGGTTTCTCATCACATACCTTAAAATTTGTTAATGCTCAAG--------
--AAGTTTCCATTCAATTGATGGAATTTGAAGATGCCTTAAAGTATCGTTTCAATCCATT
CGATGTAACAAAGATTTGGTCACACAAAGACTATCCATTAATTCAAATTGGTCGTATGGT
TTTGAATCGTAATCCAGAGAATTACTTTGCTGAAGTTGAACAAGCTGCCTTCTCACCATC
CCACATGGTTCCAGGTATTGAACCATCACCAGATAAGATGTTACAAGGTCGTCTCTTCTC
TTATCCAGATACTCATCGTCATCGTTTAGGTGTAAACTATCAACAAATCCCAGTCAATTG
TCCATTCGCCGTAAAGGGTGGTGTTAAAAACTACCAACGTGATGGTTTCATGGCTGTCAA
TGGTAATGGTGGTAAAGGTCCAAACTATCAACCAAACTCTTTCGGTGGTCCAGAGCCACA
TCCAGAATTTGCTCAACATAAATTTGACGTCTCTGGTTTCGCTGCTCGTCAACCATACAA
TCATCCAAATGACGACTTTGTTCAACCAGGTGATTTATATAGACTCATGTCTGAAGATGC
CAAATCTCGTTTCGTCTCTAATTTAGTCGGTCACATGTCCGGTGTCACCATCAAAGAAAT
TCAAGTTCGTGCCGTTTCAAACTTTTACAAGGCTGACAAAGATTTAGGTGCTCGTTTATG
TAAGGGTCTTGGTATTGATGTTAATGATGTCATCAAATTCGCTGCTAGATCAAACTTGTA
AATCAATATA