>CFI568 (CFI568Q) /CSM/CF/CFI5-C/CFI568Q.Seq.d/
ATATATTTTATTTGGGAAAAATAAATAAATAAATAAATAAATATGTCAGCTCCAGTTTTA
ACCACCAGTAGTGGTTCACCAATTGATAACAATTTAAACTCAATGACCGCAGGTGTTAAT
GGTCCAATTTTAATTCAAGATTTCACTTTAATTGATAAACTTGCTCATTTCGATCGTGAA
CGTATCCCAGAACGTGTTGTACATGCTAAAGGTGCTGGTGCCCATGGTTATTTCGAAGTT
ACCTCAAGTGATGTACCAAAATGGTGTAAAGCTAAATTCTTAAATAAAGTTGGTAAGAGA
ACACCAATCTTCACCCGTTTCTCTACTGTTGGTGGTGAAAAAGGTTCATCCGATTCTGAA
AGAGATCCAAGAGGTTTCGCTGTCAAATTTTATACTGAAGAAGGTAACTTTGATATGGTC
GGTAATAATACTCCAGTTTTCTTTATTCGTGATCCATCAAAATTCCCAGATTTCATTCAT
ACACAAAAACGTAATCCACAAACAAATTGTAAAGATCCAAATATGTTTTGGGATTTTTTA
GGTCAAACACCAGAATCAACACATCAAGTATCAATTTTATTCTCTGATAGAGGTACACCA
AAATCATATCGTCATATGCATGGTTTCTCATCACATACCTTAAAATTTGGTAATGCTCAA
GGXXXXXXXXXXAAACCATCGCCAAAGGTGGTGAACCAGCTTGGAAAGTTTCCATTCAAT
TGATGGAATTTGAAGATGCCTTAAAGTATCGTTTCAATCCATTCGATGTAACAAAGATTT
GGTCACACAAAGACTATCCATTAATTCAAATTGGTCGTATGGTTTTGAATCGTAATCCAG
AGAATTACTTTGCTGAAGTTGAACAAGCTGCCTTCTCACCATCCCACATGGTTCCAGGTA
TTGAACCATCACCAGATAAGATGTTACAAGGTCGTCTCTTCTCTTATCCAGATACTCATC
GTCATCGTTTAGGTGTAAACTATCAACAAATCCCAGTCAATTGTCCATTCGCCGTAAAGG
GTGGTGTTAAAAACTACCAACGTGATGGTTTCATGGCTGTCAATGGTAATGGTGGTAAAG
GTCCAAACTATCAACCAAACTCTTTCGGTGGTCCAGAGCCACATCCAGAATTTGCTCAAC
ATAAATTTGACGTCTCTGGTTTCGCTGCTCGTCAACCATACAATCATCCAAATGACGACT
TTGTTCAACCAGGTGATTTATATAGACTCATGTCTGAAGATGCCAAATCTCGTTTCGTCT
CTAATTTAGTCGGTCACATGTCCGGTGTCACCATCAAAGAAATTCAAGTTCGTGCCGTTT
CAAACTTTTACAAGGCTGACAAAGATTTAGGTGCTCGTTTATGTAAGGGTCTTGGTATTG
ATGTTAATATGTCATCAAATTCGCTGCTAGATCAAACTTGTAAATCAATA

iyfiwek*ink*INMSAPVLTTSSGSPIDNNLNSMTAGVNGPILIQDFTLIDKLAHFDRE
RIPERVVHAKGAGAHGYFEVTSSDVPKWCKAKFLNKVGKRTPIFTRFSTVGGEKGSSDSE
RDPRGFAVKFYTEEGNFDMVGNNTPVFFIRDPSKFPDFIHTQKRNPQTNCKDPNMFWDFL
GQTPESTHQVSILFSDRGTPKSYRHMHGFSSHTLKFGNAQ---

---TIAKGGEPAWKVSIQLMEFEDALKYRFNPFDVTKIWSHKDYPLIQIGRMVLNRNPEN
YFAEVEQAAFSPSHMVPGIEPSPDKMLQGRLFSYPDTHRHRLGVNYQQIPVNCPFAVKGG
VKNYQRDGFMAVNGNGGKGPNYQPNSFGGPEPHPEFAQHKFDVSGFAARQPYNHPNDDFV
QPGDLYRLMSEDAKSRFVSNLVGHMSGVTIKEIQVRAVSNFYKADKDLGARLCKGLGIDV
NMSSNSLLDQTCKSI

Frame A:
iyfiwek*ink*INMSAPVLTTSSGSPIDNNLNSMTAGVNGPILIQDFTLIDKLAHFDRE
RIPERVVHAKGAGAHGYFEVTSSDVPKWCKAKFLNKVGKRTPIFTRFSTVGGEKGSSDSE
RDPRGFAVKFYTEEGNFDMVGNNTPVFFIRDPSKFPDFIHTQKRNPQTNCKDPNMFWDFL
GQTPESTHQVSILFSDRGTPKSYRHMHGFSSHTLKFGNAQ---

---kpspkvvnqlgkfpfn*wnlkmp*sivsihsm*qrfghtktih*fklvvwf*iviqr
itllklnklpshhptwfqvlnhhqircykvvssliqiliviv*v*tinksqsivhsp*rv
vlkttnvmvswlsmvmvvkvqtinqtlsvvqshiqnllninltslvsllvnhtiiqmttl
fnqviyidsclkmpnlvssli*svtcpvspskkfkfvpfqtftrltki*vlvyvrvlvlm
lichqirc*iklvnq

Frame B:
yilfgknk*ink*icqlqf*ppvvvhqliti*tq*pqvlmvqf*fkisl*linllisivn
vsqnvlymlkvlvpmvisklpqvmyqngvklns*iklvrehqsspvslllvvkkvhpilk
eiqevslsnfilkkvtliwsviilqfslfvihqnsqisfihknvihkqivkiqicfgif*
vkhqnqhikyqfyslievhqnhivicmvshhip*nlvmlk---

---nhrqrw*tslesfhsidgi*rclkvsfqsircnkdlvtqrlsinsnwsygfes*sre
llc*s*tsclltiphgsry*titr*dvtrsslllsryssssfrcklstnpsqlsirrkgw
c*klpt*wfhgcqw*ww*rsklstklfrwsratsricst*i*rlwfrcsstiqssk*rlc
str*fi*thv*rcqisfrl*fsrshvrchhqrnssscrfkllqg*qrfrcsfm*gswy*c
*yvikfaarsnl*in

Frame C:
ifylgkink*inkyvsssfnhq*wftn**qfklndrrc*wsnfnsrfhfn**tcsfrs*t
yprtcctc*rcwcpwlfrsylk*ctkmv*s*ilk*sw*entnlhpflycww*krfirf*k
rskrfrcqily*rr*l*ygr**yssflys*sikiprfhsytkt*stnkl*rskyvlgffr
sntrintssinfil**rytkiissyawflitylkiw*csr---

---TIAKGGEPAWKVSIQLMEFEDALKYRFNPFDVTKIWSHKDYPLIQIGRMVLNRNPEN
YFAEVEQAAFSPSHMVPGIEPSPDKMLQGRLFSYPDTHRHRLGVNYQQIPVNCPFAVKGG
VKNYQRDGFMAVNGNGGKGPNYQPNSFGGPEPHPEFAQHKFDVSGFAARQPYNHPNDDFV
QPGDLYRLMSEDAKSRFVSNLVGHMSGVTIKEIQVRAVSNFYKADKDLGARLCKGLGIDV
NMSSNSLLDQTCKSI

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CFI568 (CFI568Q) /CSM/CF/CFI5-C/CFI568Q.Seq.d/                       2690   0.0
FC-142 (FC-142Q) /CSM/CG/CG-FC/FC-142Q.Seq.d/                        1489   0.0
AFG841 (AFG841Q) /CSM/AF/AFG8-B/AFG841Q.Seq.d/                       1483   0.0
CFI634 (CFI634Q) /CSM/CF/CFI6-B/CFI634Q.Seq.d/                       1481   0.0
AFE580 (AFE580Q) /CSM/AF/AFE5-D/AFE580Q.Seq.d/                       1477   0.0
AFI254 (AFI254Q) /CSM/AF/AFI2-C/AFI254Q.Seq.d/                       1461   0.0
SFE768 (SFE768Q) /CSM/SF/SFE7-C/SFE768Q.Seq.d/                       1459   0.0
AFE574 (AFE574Q) /CSM/AF/AFE5-D/AFE574Q.Seq.d/                       1459   0.0
AFE294 (AFE294Q) /CSM/AF/AFE2-D/AFE294Q.Seq.d/                       1457   0.0
CFF134 (CFF134Q) /CSM/CF/CFF1-B/CFF134Q.Seq.d/                       1451   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AF090443|AF090443.1 Dictyostelium discoideum catalase (cat) mRNA, complete cds.  1419   0.0    2
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4, complete sequence.  1419   0.0    13
AB064338|AB064338.1 Candida boidinii CTA1 gene for peroxisomal catalase, complete cds.   111   2e-64  7
E65314|E65314.1 Novel catalase, gene of said catalase and composition containing  said  catalase, and process for preparing catalase using the genetic engineering  technology.    86   1e-32  4
AP004595|AP004595.1 Oceanobacillus iheyensis genomic DNA, section 3/13.    72   1e-31  10
AX536932|AX536932.1 Sequence 533 from Patent WO02064766.          101   7e-29  3
AJ400964|AJ400964.1 Proteus mirabilis ORF1 DNA, katA gene and menE gene, wild type.    76   4e-27  3
AJ400965|AJ400965.1 Proteus mirabilis ORF1 DNA, katA gene and menE gene, strain PR.    76   4e-27  3
AB006327|AB006327.1 Candida albicans mRNA for catalase, complete cds.    94   2e-26  3
U40704|U40704.1 Candida albicans catalase (Cat) gene, complete cds.    86   3e-26  3

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF090443_1(AF090443|pid:none) Dictyostelium discoideum catalase ...   502   0.0
(O93662) RecName: Full=Catalase;          EC=1.11.1.6;  &AJ00593...   322   e-162
CP000300_481(CP000300|pid:none) Methanococcoides burtonii DSM 62...   315   e-161
AY242059_1(AY242059|pid:none) Melopsittacus undulatus catalase (...   287   e-147
(Q9XZD5) RecName: Full=Peroxisomal catalase;          EC=1.11.1....   306   e-147
AJ719360_1(AJ719360|pid:none) Gallus gallus mRNA for hypothetica...   291   e-143
BC051626_1(BC051626|pid:none) Danio rerio catalase, mRNA (cDNA c...   288   e-143
(Q2I6W4) RecName: Full=Catalase;          EC=1.11.1.6;  &DQ24181...   288   e-143
(P04040) RecName: Full=Catalase;          EC=1.11.1.6;  &AK29158...   288   e-142
DQ530211_1(DQ530211|pid:none) Haliotis discus discus catalase mR...   298   e-142

 psg: 0.89  gvh: 0.57  alm: 0.44  top: 0.40  tms: 0.00  mit: 0.31  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 32.0 %: nuclear
	 20.0 %: extracellular, including cell wall
	 20.0 %: cytoplasmic
	 12.0 %: mitochondrial
	  8.0 %: endoplasmic reticulum
	  4.0 %: cytoskeletal
	  4.0 %: peroxisomal

>> prediction for CFI568 is nuc

>CFI568F.Seq
ATATATTTTATTTGGGAAAAATAAATAAATAAATAAATAAATATGTCAGCTCCAGTTTTA
ACCACCAGTAGTGGTTCACCAATTGATAACAATTTAAACTCAATGACCGCAGGTGTTAAT
GGTCCAATTTTAATTCAAGATTTCACTTTAATTGATAAACTTGCTCATTTCGATCGTGAA
CGTATCCCAGAACGTGTTGTACATGCTAAAGGTGCTGGTGCCCATGGTTATTTCGAAGTT
ACCTCAAGTGATGTACCAAAATGGTGTAAAGCTAAATTCTTAAATAAAGTTGGTAAGAGA
ACACCAATCTTCACCCGTTTCTCTACTGTTGGTGGTGAAAAAGGTTCATCCGATTCTGAA
AGAGATCCAAGAGGTTTCGCTGTCAAATTTTATACTGAAGAAGGTAACTTTGATATGGTC
GGTAATAATACTCCAGTTTTCTTTATTCGTGATCCATCAAAATTCCCAGATTTCATTCAT
ACACAAAAACGTAATCCACAAACAAATTGTAAAGATCCAAATATGTTTTGGGATTTTTTA
GGTCAAACACCAGAATCAACACATCAAGTATCAATTTTATTCTCTGATAGAGGTACACCA
AAATCATATCGTCATATGCATGGTTTCTCATCACATACCTTAAAATTTGGTAATGCTCAA
GGNNNNNNNNNN

>CFI568Z.Seq
NNNNNNNNNNAAACCATCGCCAAAGGTGGTGAACCAGCTTGGAAAGTTTCCATTCAATTG
ATGGAATTTGAAGATGCCTTAAAGTATCGTTTCAATCCATTCGATGTAACAAAGATTTGG
TCACACAAAGACTATCCATTAATTCAAATTGGTCGTATGGTTTTGAATCGTAATCCAGAG
AATTACTTTGCTGAAGTTGAACAAGCTGCCTTCTCACCATCCCACATGGTTCCAGGTATT
GAACCATCACCAGATAAGATGTTACAAGGTCGTCTCTTCTCTTATCCAGATACTCATCGT
CATCGTTTAGGTGTAAACTATCAACAAATCCCAGTCAATTGTCCATTCGCCGTAAAGGGT
GGTGTTAAAAACTACCAACGTGATGGTTTCATGGCTGTCAATGGTAATGGTGGTAAAGGT
CCAAACTATCAACCAAACTCTTTCGGTGGTCCAGAGCCACATCCAGAATTTGCTCAACAT
AAATTTGACGTCTCTGGTTTCGCTGCTCGTCAACCATACAATCATCCAAATGACGACTTT
GTTCAACCAGGTGATTTATATAGACTCATGTCTGAAGATGCCAAATCTCGTTTCGTCTCT
AATTTAGTCGGTCACATGTCCGGTGTCACCATCAAAGAAATTCAAGTTCGTGCCGTTTCA
AACTTTTACAAGGCTGACAAAGATTTAGGTGCTCGTTTATGTAAGGGTCTTGGTATTGAT
GTTAATATGTCATCAAATTCGCTGCTAGATCAAACTTGTAAATCAATA

>CFI568P.Seq
ATATATTTTATTTGGGAAAAATAAATAAATAAATAAATAAATATGTCAGCTCCAGTTTTA
ACCACCAGTAGTGGTTCACCAATTGATAACAATTTAAACTCAATGACCGCAGGTGTTAAT
GGTCCAATTTTAATTCAAGATTTCACTTTAATTGATAAACTTGCTCATTTCGATCGTGAA
CGTATCCCAGAACGTGTTGTACATGCTAAAGGTGCTGGTGCCCATGGTTATTTCGAAGTT
ACCTCAAGTGATGTACCAAAATGGTGTAAAGCTAAATTCTTAAATAAAGTTGGTAAGAGA
ACACCAATCTTCACCCGTTTCTCTACTGTTGGTGGTGAAAAAGGTTCATCCGATTCTGAA
AGAGATCCAAGAGGTTTCGCTGTCAAATTTTATACTGAAGAAGGTAACTTTGATATGGTC
GGTAATAATACTCCAGTTTTCTTTATTCGTGATCCATCAAAATTCCCAGATTTCATTCAT
ACACAAAAACGTAATCCACAAACAAATTGTAAAGATCCAAATATGTTTTGGGATTTTTTA
GGTCAAACACCAGAATCAACACATCAAGTATCAATTTTATTCTCTGATAGAGGTACACCA
AAATCATATCGTCATATGCATGGTTTCTCATCACATACCTTAAAATTTGGTAATGCTCAA
GG----------AAACCATCGCCAAAGGTGGTGAACCAGCTTGGAAAGTTTCCATTCAAT
TGATGGAATTTGAAGATGCCTTAAAGTATCGTTTCAATCCATTCGATGTAACAAAGATTT
GGTCACACAAAGACTATCCATTAATTCAAATTGGTCGTATGGTTTTGAATCGTAATCCAG
AGAATTACTTTGCTGAAGTTGAACAAGCTGCCTTCTCACCATCCCACATGGTTCCAGGTA
TTGAACCATCACCAGATAAGATGTTACAAGGTCGTCTCTTCTCTTATCCAGATACTCATC
GTCATCGTTTAGGTGTAAACTATCAACAAATCCCAGTCAATTGTCCATTCGCCGTAAAGG
GTGGTGTTAAAAACTACCAACGTGATGGTTTCATGGCTGTCAATGGTAATGGTGGTAAAG
GTCCAAACTATCAACCAAACTCTTTCGGTGGTCCAGAGCCACATCCAGAATTTGCTCAAC
ATAAATTTGACGTCTCTGGTTTCGCTGCTCGTCAACCATACAATCATCCAAATGACGACT
TTGTTCAACCAGGTGATTTATATAGACTCATGTCTGAAGATGCCAAATCTCGTTTCGTCT
CTAATTTAGTCGGTCACATGTCCGGTGTCACCATCAAAGAAATTCAAGTTCGTGCCGTTT
CAAACTTTTACAAGGCTGACAAAGATTTAGGTGCTCGTTTATGTAAGGGTCTTGGTATTG
ATGTTAATATGTCATCAAATTCGCTGCTAGATCAAACTTGTAAATCAATA