>CFI329 (CFI329Q) /CSM/CF/CFI3-B/CFI329Q.Seq.d/
ACAAAAAACATTTTCTAATAAAACAGATAAATNAAAAATGACTACCTTTAACGAATATCC
ATTCTTGGCTGAATTAGGCATTAAAGCTGAAAATCATGATGGAGTCTTCAATGGAAAATG
GGGAGGTGCTGGTGAAATCATCAAATGTTTAAATCCAACAAATAATAAAGTTATTGCAAC
TGTTAGAGGTGCTGCACCAGAAGAATATGAAACATGTATTCAAGCAATGTTAGCAGCAAA
AGTAAAATGGGCATTAACACCAGCTCCAAGAAGAGGTGAAATTGTTAGATTAATTGGTCA
AGCCATGAGAGAAAAAATTGAACCATTATCAAAATTAATTTCATTAGAAATGGGTAAAAT
TTACATTGAAGCTAAAGGTGAAGTACAAGAATTCATTGACGTATGCGATTATGCAACTGG
TTTAAGTAGATCAATCAATGGTCAAGTAATGCCATCTGAACGTCCAAATCACATTTTAAT
GGAAACCTGGAATCCATTAGXXXXXXXXXXTGGTGGAAACTTTGTTNAACCAACCGTCGT
TGCCNTTNAACATNATGCTCCNATNGTAAANACTNAACTNTTTGTTCCAATTNTNTACAT
AATGAAATTCAAAAATNTTGACGATGCTTTTGCCTGGAATAATGAAGTNCCNCAAGGTNT
NTCATNTTCCCTNTTNACAAACAATCAAAANAATATNTTCAAATGGCTTGGACCTACCGG
ATCTGACTGTGGNATAGTTAACGTAAATGNAGCTACNAACGGNGCTGAAATTGGTGGNGC
CNTTGGAGGTGAAAAANAGACCGGAGGTGGTANA

QKTFSNKTDKXKMTTFNEYPFLAELGIKAENHDGVFNGKWGGAGEIIKCLNPTNNKVIAT
VRGAAPEEYETCIQAMLAAKVKWALTPAPRRGEIVRLIGQAMREKIEPLSKLISLEMGKI
YIEAKGEVQEFIDVCDYATGLSRSINGQVMPSERPNHILMETWNPL---

---GGNFVXPTVVAXXHXAPXVXTXLFVPIXYIMKFKNXDDAFAWNNEVPQGXSXSLXTN
NQXNXFKWLGPTGSDCGIVNVNXATNGAEIGGAXGGEKXTGGGX

Frame A:
tknif**nr*xkndyl*risilg*irh*s*ks*wslqwkmgrcw*nhqmfksnk**sycn
c*rcctrri*nmyssnvsskskmgintsskkr*nc*inwssherkn*tiikinfirng*n
lh*s*r*strih*rmrlcnwfk*inqwssnai*tskshfngnlesi---

---wwklcxtnrrcxxtxcsxxkxxtxcsnxxhneiqkx*rcfcle**sxxrxxxfpxxk
qskxyxqmawtyri*lwxs*rkxsyxrx*nwwxxwr*kxdrrwx

Frame B:
QKTFSNKTDKXKMTTFNEYPFLAELGIKAENHDGVFNGKWGGAGEIIKCLNPTNNKVIAT
VRGAAPEEYETCIQAMLAAKVKWALTPAPRRGEIVRLIGQAMREKIEPLSKLISLEMGKI
YIEAKGEVQEFIDVCDYATGLSRSINGQVMPSERPNHILMETWNPL---

---GGNFVXPTVVAXXHXAPXVXTXLFVPIXYIMKFKNXDDAFAWNNEVPQGXSXSLXTN
NQXNXFKWLGPTGSDCGIVNVNXATNGAEIGGAXGGEKXTGGGX

Frame C:
kkhflikqinxk*lpltnihswln*alklkimmessmengevlvkssnv*iqqiikllql
levlhqknmkhvfkqc*qqk*ngh*hqlqeevklld*lvkp*ekklnhyqn*fh*kwvkf
tlklkvkyknsltyaimqlv*vdqsmvk*chlnvqitf*wkpgih*---

---vetlxnqpslpxnxmlxx*xlnxlfqxxt**nskxltmllpgimkxxkvxhxpxxqt
ikxixsngldlpdltvx*lt*mxlxtxlklvxplevkxrpevv

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CFI329 (CFI329Q) /CSM/CF/CFI3-B/CFI329Q.Seq.d/                       1342   0.0
VFB483 (VFB483Q) /CSM/VF/VFB4-D/VFB483Q.Seq.d/                        969   0.0
CFI379 (CFI379Q) /CSM/CF/CFI3-D/CFI379Q.Seq.d/                        969   0.0
CFH684 (CFH684Q) /CSM/CF/CFH6-D/CFH684Q.Seq.d/                        969   0.0
CFB419 (CFB419Q) /CSM/CF/CFB4-A/CFB419Q.Seq.d/                        969   0.0
CFA805 (CFA805Q) /CSM/CF/CFA8-A/CFA805Q.Seq.d/                        969   0.0
CFI380 (CFI380Q) /CSM/CF/CFI3-D/CFI380Q.Seq.d/                        967   0.0
CFH751 (CFH751Q) /CSM/CF/CFH7-C/CFH751Q.Seq.d/                        965   0.0
CFA342 (CFA342Q) /CSM/CF/CFA3-B/CFA342Q.Seq.d/                        965   0.0
CFB280 (CFB280Q) /CSM/CF/CFB2-D/CFB280Q.Seq.d/                        963   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC117072|AC117072.2 Dictyostelium discoideum chromosome 2 map 3323568-3470138 strain AX4, complete sequence.   607   0.0    7
BU796678|BU796678.1 SJF2EEH06 SJF Schistosoma japonicum cDNA, mRNA sequence.    48   0.19   1
AF063866|AF063866.1 Melanoplus sanguinipes entomopoxvirus, complete genome.    38   0.32   8
AX340209|AX340209.1 Sequence 456 from Patent WO0196388.            38   0.33   2
BU111535|BU111535.1 603126401F1 CSEQCHL13 Gallus gallus cDNA clone ChEST96a2 5', mRNA sequence.    42   0.36   2
CD733534|CD733534.1 4045967 1GAL - Chicken Intestinal Lymphocyte Gallus gallus cDNA clone 1GAL_17H10 5', mRNA sequence.    42   0.38   2
BU399611|BU399611.1 603481881F1 CSEQCHN59 Gallus gallus cDNA clone ChEST370a22 5', mRNA sequence.    42   0.38   2
BG711333| (S74728) antiquitin=26g turgor protein homolog [human, kidney, Peptide, 511 aa] [Homo sapiens]G, mRNA sequence.    42   0.39   2
BU358377|BU358377.1 603476320F1 CSEQCHN71 Gallus gallus cDNA clone ChEST360h6 5', mRNA sequence.    42   0.39   2
BU488446|BU488446.1 604125245F1 CSEQRBN36 Gallus gallus cDNA clone ChEST943i12 5', mRNA sequence.    42   0.41   2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P83401) RecName: Full=Putative aldehyde dehydrogenase family 7 ...   313   5e-84
BC044367_1(BC044367|pid:none) Danio rerio aldehyde dehydrogenase...   183   6e-45
AY883858_1(AY883858|pid:none) Sterkiella histriomuscorum turgor ...   179   7e-44
EF678715_1(EF678715|pid:none) Picea sitchensis clone WS0295_M17 ...   177   3e-43
BT044648_1(BT044648|pid:none) Salmo salar clone ssal-rgf-001-326...   177   4e-43
AY847462_1(AY847462|pid:none) Acanthopagrus schlegelii antiquiti...   173   5e-42
AF323586_1(AF323586|pid:none) Oryza sativa aldehyde dehydrogenas...   172   1e-41
AK297365_1(AK297365|pid:none) Homo sapiens cDNA FLJ56008 complet...   170   4e-41
(P49419) RecName: Full=Alpha-aminoadipic semialdehyde dehydrogen...   170   4e-41
AK160117_1(AK160117|pid:none) Mus musculus osteoclast-like cell ...   170   6e-41

 psg: 0.63  gvh: 0.29  alm: 0.42  top: 0.53  tms: 0.00  mit: 0.31  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: cytoplasmic
	 32.0 %: nuclear
	 12.0 %: mitochondrial
	  8.0 %: cytoskeletal
	  4.0 %: vacuolar
	  4.0 %: peroxisomal

>> prediction for CFI329 is cyt

>CFI329F.Seq
ACAAAAAACATTTTCTAATAAAACAGATAAATNAAAAATGACTACCTTTAACGAATATCC
ATTCTTGGCTGAATTAGGCATTAAAGCTGAAAATCATGATGGAGTCTTCAATGGAAAATG
GGGAGGTGCTGGTGAAATCATCAAATGTTTAAATCCAACAAATAATAAAGTTATTGCAAC
TGTTAGAGGTGCTGCACCAGAAGAATATGAAACATGTATTCAAGCAATGTTAGCAGCAAA
AGTAAAATGGGCATTAACACCAGCTCCAAGAAGAGGTGAAATTGTTAGATTAATTGGTCA
AGCCATGAGAGAAAAAATTGAACCATTATCAAAATTAATTTCATTAGAAATGGGTAAAAT
TTACATTGAAGCTAAAGGTGAAGTACAAGAATTCATTGACGTATGCGATTATGCAACTGG
TTTAAGTAGATCAATCAATGGTCAAGTAATGCCATCTGAACGTCCAAATCACATTTTAAT
GGAAACCTGGAATCCATTAGNNNNNNNNNN

>CFI329Z.Seq
NNNNNNNNNNTGGTGGAAACTTTGTTNAACCAACCGTCGTTGCCNTTNAACATNATGCTC
CNATNGTAAANACTNAACTNTTTGTTCCAATTNTNTACATAATGAAATTCAAAAATNTTG
ACGATGCTTTTGCCTGGAATAATGAAGTNCCNCAAGGTNTNTCATNTTCCCTNTTNACAA
ACAATCAAAANAATATNTTCAAATGGCTTGGACCTACCGGATCTGACTGTGGNATAGTTA
ACGTAAATGNAGCTACNAACGGNGCTGAAATTGGTGGNGCCNTTGGAGGTGAAAAANAGA
CCGGAGGTGGTANA

>CFI329P.Seq
ACAAAAAACATTTTCTAATAAAACAGATAAATNAAAAATGACTACCTTTAACGAATATCC
ATTCTTGGCTGAATTAGGCATTAAAGCTGAAAATCATGATGGAGTCTTCAATGGAAAATG
GGGAGGTGCTGGTGAAATCATCAAATGTTTAAATCCAACAAATAATAAAGTTATTGCAAC
TGTTAGAGGTGCTGCACCAGAAGAATATGAAACATGTATTCAAGCAATGTTAGCAGCAAA
AGTAAAATGGGCATTAACACCAGCTCCAAGAAGAGGTGAAATTGTTAGATTAATTGGTCA
AGCCATGAGAGAAAAAATTGAACCATTATCAAAATTAATTTCATTAGAAATGGGTAAAAT
TTACATTGAAGCTAAAGGTGAAGTACAAGAATTCATTGACGTATGCGATTATGCAACTGG
TTTAAGTAGATCAATCAATGGTCAAGTAATGCCATCTGAACGTCCAAATCACATTTTAAT
GGAAACCTGGAATCCATTAG----------TGGTGGAAACTTTGTTNAACCAACCGTCGT
TGCCNTTNAACATNATGCTCCNATNGTAAANACTNAACTNTTTGTTCCAATTNTNTACAT
AATGAAATTCAAAAATNTTGACGATGCTTTTGCCTGGAATAATGAAGTNCCNCAAGGTNT
NTCATNTTCCCTNTTNACAAACAATCAAAANAATATNTTCAAATGGCTTGGACCTACCGG
ATCTGACTGTGGNATAGTTAACGTAAATGNAGCTACNAACGGNGCTGAAATTGGTGGNGC
CNTTGGAGGTGAAAAANAGACCGGAGGTGGTANA