>CFH749 (CFH749Q) /CSM/CF/CFH7-C/CFH749Q.Seq.d/
TAGTTGAACATGCAAATTACAGAAAAAGAANCAGTCCANGAAGAACANCAAAAATTACTA
TTTCCACCACCTTCTTTTAGTNCAAAATGTCATATATCATCAGTAGAACAATATAATGAA
ATGTNTAAAGAAAGTATTGAATCACCAAATCAATTTTGGGATAAAAAAGCTAAAGAATTT
TTAACTTGGTTTTCTGATTATACAACTGTTCAACATGGATCATTCGAAAAAGGNGATATT
TCATGGTTTTTAAATGGTAAAATTAATGTTTCATATAATTGTATCGATAGACATTTAAAA
GAGAATGCAGATAAAGTTGCAATACTATTTGAAGGNGATGAANAAACAATGGTTAAAAAA
GTTACATATAGAGAGATGTTTGAAGAGGTTTGTXXXXXXXXXXTATTGCTCGTTCAGTTT
ATCGTTCTCATGGTCGTTATCTTCAAACTTATATGACTCAATATAAAGGTCACTATTTCA
CTGGTGATGGTGTAAAACTTGACTCTGATGGTTATTATTGGATCGAAGGTAGAGTAGATG
ATGTTATCAATGTTAGTGGTCATAGATTAGGTACTGCTGAATTAGAGAGTGCCCTCGTTG
GTTGTTCAATTTGTGCAGAGGCTGCCGTTGTTGGTTATCCTCATGATATCAAAGGTCAAG
GTATTTTAGCATTTTGTACACTCAAAGAAGGTTATCAAGAGGATGAATCAAATGTTATTA
TGATGTTAAAAAAAGAAGTTAGAAATGTAATTGGTCCATTTGCAACACCTGATGTAATTG
TTATAACACCTTCACTTCCAAAAACTCGTAGTGGTAAAATTATGAGAAGAATTCTTAGAA
AAATTGGTTGTCATGAATCTTCTGCTGAACAATTAGGTGATATTTCAACTTTAGCTGAAC
CTGAAGTTGTCAAACTTTTAATNAAAAAGTTTCAAAAGAATTCCAAAAACTCATNAAAAA
ANAAAAAAAAAAAAAATAATNCAG

*LNMQITEKEXVXEEXQKLLFPPPSFSXKCHISSVEQYNEMXKESIESPNQFWDKKAKEF
LTWFSDYTTVQHGSFEKGDISWFLNGKINVSYNCIDRHLKENADKVAILFEGDEXTMVKK
VTYREMFEEVC---

---IARSVYRSHGRYLQTYMTQYKGHYFTGDGVKLDSDGYYWIEGRVDDVINVSGHRLGT
AELESALVGCSICAEAAVVGYPHDIKGQGILAFCTLKEGYQEDESNVIMMLKKEVRNVIG
PFATPDVIVITPSLPKTRSGKIMRRILRKIGCHESSAEQLGDISTLAEPEVVKLLXKKFQ
KNSKNSXKXKKKKNNX

Frame A:
*LNMQITEKEXVXEEXQKLLFPPPSFSXKCHISSVEQYNEMXKESIESPNQFWDKKAKEF
LTWFSDYTTVQHGSFEKGDISWFLNGKINVSYNCIDRHLKENADKVAILFEGDEXTMVKK
VTYREMFEEVC---

---ycsfslsfswslssnlydsi*rslfhw*wckt*l*wllldrr*sr*cyqc*ws*iry
c*irecprwlfnlcrgcrcwlss*yqrsryfsilytqrrlsrg*ikcyydvkkrs*kcnw
sicnt*cncyntftskns*w*nyekns*knwls*ifc*tir*yfnfs*t*scqtfnxkvs
kefqklxkkxkkkk*x

Frame B:
s*tcklqkkxqsxknxknyyfhhlllvqnviyhq*nnimkcxkkvlnhqinfgikklknf
*lgfliiqlfnmdhskkxifhgf*mvklmfhiivsidi*krmqiklqyylkxmxkqwlkk
lhierclkrf---

---IARSVYRSHGRYLQTYMTQYKGHYFTGDGVKLDSDGYYWIEGRVDDVINVSGHRLGT
AELESALVGCSICAEAAVVGYPHDIKGQGILAFCTLKEGYQEDESNVIMMLKKEVRNVIG
PFATPDVIVITPSLPKTRSGKIMRRILRKIGCHESSAEQLGDISTLAEPEVVKLLXKKFQ
KNSKNSXKXKKKKNNX

Frame C:
vehanyrkrxspxrtxkitisttff*xkmsyiisrti**nv*rky*itksilg*ks*rif
nlvf*lyncstwiirkrxyfmvfkw*n*cfi*lyr*tfkrecr*scnti*rx*xnng*ks
yi*rdv*rgl---

---llvqfivlmvvifkli*lnikvtislvmv*nltlmviigskve*mmlsmlvvid*vl
ln*rvpslvvqfvqrlpllvilmiskvkvf*hfvhskkvikrmnqmll*c*kkklem*lv
hlqhlm*ll*hlhfqklvvvkl*eefleklvvmnlllnn*vifql*lnlklsnf*xksfk
ripkthxkxkkkkixq

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CFH749 (CFH749Q) /CSM/CF/CFH7-C/CFH749Q.Seq.d/                       1737   0.0
VHO673 (VHO673Q) /CSM/VH/VHO6-D/VHO673Q.Seq.d/                       1031   0.0
VHD191 (VHD191Q) /CSM/VH/VHD1-D/VHD191Q.Seq.d/                       1031   0.0
SFF506 (SFF506Q) /CSM/SF/SFF5-A/SFF506Q.Seq.d/                       1031   0.0
CFJ158 (CFJ158Q) /CSM/CF/CFJ1-C/CFJ158Q.Seq.d/                       1031   0.0
AFE757 (AFE757Q) /CSM/AF/AFE7-C/AFE757Q.Seq.d/                       1031   0.0
SFF249 (SFF249Q) /CSM/SF/SFF2-C/SFF249Q.Seq.d/                       1023   0.0
CFH854 (CFH854Q) /CSM/CF/CFH8-C/CFH854Q.Seq.d/                       1023   0.0
VHJ869 (VHJ869Q) /CSM/VH/VHJ8-C/VHJ869Q.Seq.d/                       1017   0.0
SFB864 (SFB864Q) /CSM/SF/SFB8-C/SFB864Q.Seq.d/                       1017   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC115612|AC115612.2 Dictyostelium discoideum chromosome 2 map 6245135-6357017 strain AX4, complete sequence.   642   0.0    9
AX489103|AX489103.1 Sequence 6403 from Patent WO02053728.          70   2e-20  5
AZ930496|AZ930496.1 474.dhz54h09.s1 Saccharomyces unisporus NRRL Y-1556 Saccharomyces unisporus genomic clone 474.dhz54h09.s1, DNA sequence.    72   3e-14  2
CD978883|CD978883.1 QAF6c12.yg QAF Zea mays cDNA clone QAF6c12, mRNA sequence.    42   5e-13  4
AW037040|AW037040.1 614025A12.y1 614 - root cDNA library from Walbot Lab Zea mays cDNA, mRNA sequence.    42   2e-12  4
BI674812|BI674812.1 949067E10.y2 949 - Juvenile leaf and shoot cDNA from Steve Moose Zea mays cDNA, mRNA sequence.    42   4e-12  4
CA269673|CA269673.1 SCMCRT3083F09.g RT3 Saccharum officinarum cDNA clone SCMCRT3083F09 5', mRNA sequence.    42   6e-12  4
CA258874|CA258874.1 SCBGRT3013E01.g RT3 Saccharum officinarum cDNA clone SCBGRT3013E01 5', mRNA sequence.    42   7e-12  4
CF635493|CF635493.1 zmrww00_0A20-011-b10.s2 zmrww00 Zea mays cDNA, mRNA sequence.    42   1e-11  4
BI478599|BI478599.1 949067E10.x1 949 - Juvenile leaf and shoot cDNA from Steve Moose Zea mays cDNA, mRNA sequence.    42   7e-11  4

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC115612_37(AC115612|pid:none) Dictyostelium discoideum chromoso...   343   4e-93
(Q54Z60) RecName: Full=Acetyl-coenzyme A synthetase;          EC...   343   4e-93
CP000158_1385(CP000158|pid:none) Hyphomonas neptunium ATCC 15444...   210   7e-53
CP000927_111(CP000927|pid:none) Caulobacter sp. K31, complete ge...   208   3e-52
(Q6MNF1) RecName: Full=Acetyl-coenzyme A synthetase;          EC...   208   3e-52
DQ782753_1(DQ782753|pid:none) Polytomella parva plastid acetyl C...   207   4e-52
(A1U2S9) RecName: Full=Acetyl-coenzyme A synthetase;          EC...   206   1e-51
CP000157_932(CP000157|pid:none) Erythrobacter litoralis HTCC2594...   204   5e-51
CP001103_707(CP001103|pid:none) Alteromonas macleodii 'Deep ecot...   203   6e-51
(Q2G512) RecName: Full=Acetyl-coenzyme A synthetase;          EC...   203   8e-51

 psg: 0.75  gvh: 0.50  alm: 0.35  top: 0.53  tms: 0.00  mit: 0.23  mip: 0.00
 nuc: 0.12  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: cytoplasmic
	 28.0 %: nuclear
	 16.0 %: mitochondrial
	  8.0 %: vacuolar
	  4.0 %: cytoskeletal
	  4.0 %: endoplasmic reticulum
	  4.0 %: peroxisomal

>> prediction for CFH749 is cyt

>CFH749F.Seq
TAGTTGAACATGCAAATTACAGAAAAAGAANCAGTCCANGAAGAACANCAAAAATTACTA
TTTCCACCACCTTCTTTTAGTNCAAAATGTCATATATCATCAGTAGAACAATATAATGAA
ATGTNTAAAGAAAGTATTGAATCACCAAATCAATTTTGGGATAAAAAAGCTAAAGAATTT
TTAACTTGGTTTTCTGATTATACAACTGTTCAACATGGATCATTCGAAAAAGGNGATATT
TCATGGTTTTTAAATGGTAAAATTAATGTTTCATATAATTGTATCGATAGACATTTAAAA
GAGAATGCAGATAAAGTTGCAATACTATTTGAAGGNGATGAANAAACAATGGTTAAAAAA
GTTACATATAGAGAGATGTTTGAAGAGGTTTGTNNNNNNNNNN

>CFH749Z.Seq
NNNNNNNNNNTATTGCTCGTTCAGTTTATCGTTCTCATGGTCGTTATCTTCAAACTTATA
TGACTCAATATAAAGGTCACTATTTCACTGGTGATGGTGTAAAACTTGACTCTGATGGTT
ATTATTGGATCGAAGGTAGAGTAGATGATGTTATCAATGTTAGTGGTCATAGATTAGGTA
CTGCTGAATTAGAGAGTGCCCTCGTTGGTTGTTCAATTTGTGCAGAGGCTGCCGTTGTTG
GTTATCCTCATGATATCAAAGGTCAAGGTATTTTAGCATTTTGTACACTCAAAGAAGGTT
ATCAAGAGGATGAATCAAATGTTATTATGATGTTAAAAAAAGAAGTTAGAAATGTAATTG
GTCCATTTGCAACACCTGATGTAATTGTTATAACACCTTCACTTCCAAAAACTCGTAGTG
GTAAAATTATGAGAAGAATTCTTAGAAAAATTGGTTGTCATGAATCTTCTGCTGAACAAT
TAGGTGATATTTCAACTTTAGCTGAACCTGAAGTTGTCAAACTTTTAATNAAAAAGTTTC
AAAAGAATTCCAAAAACTCATNAAAAAANAAAAAAAAAAAAAATAATNCAG

>CFH749P.Seq
TAGTTGAACATGCAAATTACAGAAAAAGAANCAGTCCANGAAGAACANCAAAAATTACTA
TTTCCACCACCTTCTTTTAGTNCAAAATGTCATATATCATCAGTAGAACAATATAATGAA
ATGTNTAAAGAAAGTATTGAATCACCAAATCAATTTTGGGATAAAAAAGCTAAAGAATTT
TTAACTTGGTTTTCTGATTATACAACTGTTCAACATGGATCATTCGAAAAAGGNGATATT
TCATGGTTTTTAAATGGTAAAATTAATGTTTCATATAATTGTATCGATAGACATTTAAAA
GAGAATGCAGATAAAGTTGCAATACTATTTGAAGGNGATGAANAAACAATGGTTAAAAAA
GTTACATATAGAGAGATGTTTGAAGAGGTTTGT----------TATTGCTCGTTCAGTTT
ATCGTTCTCATGGTCGTTATCTTCAAACTTATATGACTCAATATAAAGGTCACTATTTCA
CTGGTGATGGTGTAAAACTTGACTCTGATGGTTATTATTGGATCGAAGGTAGAGTAGATG
ATGTTATCAATGTTAGTGGTCATAGATTAGGTACTGCTGAATTAGAGAGTGCCCTCGTTG
GTTGTTCAATTTGTGCAGAGGCTGCCGTTGTTGGTTATCCTCATGATATCAAAGGTCAAG
GTATTTTAGCATTTTGTACACTCAAAGAAGGTTATCAAGAGGATGAATCAAATGTTATTA
TGATGTTAAAAAAAGAAGTTAGAAATGTAATTGGTCCATTTGCAACACCTGATGTAATTG
TTATAACACCTTCACTTCCAAAAACTCGTAGTGGTAAAATTATGAGAAGAATTCTTAGAA
AAATTGGTTGTCATGAATCTTCTGCTGAACAATTAGGTGATATTTCAACTTTAGCTGAAC
CTGAAGTTGTCAAACTTTTAATNAAAAAGTTTCAAAAGAATTCCAAAAACTCATNAAAAA
ANAAAAAAAAAAAAAATAATNCAG