>CFH347 (CFH347Q) /CSM/CF/CFH3-B/CFH347Q.Seq.d/
ATTTTTTTTTATTAAATAAAATATATAGTAACATTAGATTAGTAATAATATAATATAATA
TTACAAAAAGAAAATTTATTTTTTATCAAATTTGAGAAAAAAAAAAXXXXXXXXXXAGAA
GGTGAAATTTGTGTTTTAGAACATGGTGTTTTGGGTTGTCTTGAAAATCCAGTTGAAGAT
AGTAAAGCAAATTGTGGTTTATTCCATTGTAATTACAATGAATATTGTATTATGGTTAAT
GGTTATCTTTAATGTTTATTCTCAAATGGTACTGCACCATTTGCATGTGGTCTCCAAACT
TGTGTTCCACCACAATTATGTGTAAAGGTTGAAAATTGTCAACAATGTGTTTCTCCACCA
AGACCAGACAATAACTGTGGTGACAAATATTGTGATGATGAACATCAATGTGTTAGAAAA
GGACTCGGTTATGAATGTATTCCAAAACGTCTTACTTGTGAGACCAAAAAATGCGAAGCC
TCTCAAGTTTGTATCATGGTAAATGGTGATGCTCAATGTATCGTACCACCAGCTGCCGCC
GCTGCTGAAATTAGAATAAACAATTTCAGATTCAACCGTAACTCTGTTCAACGTAATGCC
AAACCAGCTCAACAACAAAGATCTGCTCAACATGCCAAACCAGCTCAACATGGTAAACCA
GCTCAACATGTCGCTCA

iffy*ikyivtld***YNIILQKENLFFIKFEKKK---

---EGEICVLEHGVLGCLENPVEDSKANCGLFHCNYNEYCIMVNGYL*clfsngtapfac
glqtcvppqlcvkvencqqcvspprpdnncgdkycddehqcvrkglgyecipkrltcetk
kceasqvcimvngdaqcivppaaaaaeirinnfrfnrnsvqrnakpaqqqrsaqhakpaq
hgkpaqhva

Frame A:
iffy*ikyivtld***YNIILQKENLFFIKFEKKK---

---rr*nlcfrtwcfgls*kss*r**sklwfipl*lq*ilyyg*wlslmfilkwycticm
wspnlcsttimckg*klstmcfstktrq*lw*qil***tsmc*krtrl*mysktsyl*dq
kmrslsslyhgkw*csmyrttscrrc*n*nkqfqiqp*lcst*cqtssttkicstcqtss
tw*tsstcrs

Frame B:
fffik*ni**h*isnnii*yykkkiyflsnlrkkk---

---EGEICVLEHGVLGCLENPVEDSKANCGLFHCNYNEYCIMVNGYL*clfsngtapfac
glqtcvppqlcvkvencqqcvspprpdnncgdkycddehqcvrkglgyecipkrltcetk
kceasqvcimvngdaqcivppaaaaaeirinnfrfnrnsvqrnakpaqqqrsaqhakpaq
hgkpaqhva

Frame C:
ffllnkiysnirlvii*ynitkrkfifyqi*ekk---

---kvkfvf*nmvfwvvlkiqlkivkqivvysivitmnivlwlmvifnvysqmvlhhlhv
vsklvfhhnyv*rlkivnnvflhqdqtitvvtnivmmninvlekdsvmnvfqnvllvrpk
nakplkfvsw*mvmlnvsyhqlppllkle*tisdstvtlfnvmpnqlnnkdllnmpnqln
mvnqlnmsl

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CFH347 (CFH347Q) /CSM/CF/CFH3-B/CFH347Q.Seq.d/                       1112   0.0
AFO895 (AFO895Q) /CSM/AF/AFO8-D/AFO895Q.Seq.d/                       1090   0.0
CFA402 (CFA402Q) /CSM/CF/CFA4-A/CFA402Q.Seq.d/                       1082   0.0
CFJ111 (CFJ111Q) /CSM/CF/CFJ1-A/CFJ111Q.Seq.d/                       1076   0.0
CFC463 (CFC463Q) /CSM/CF/CFC4-C/CFC463Q.Seq.d/                       1047   0.0
CFF468 (CFF468Q) /CSM/CF/CFF4-C/CFF468Q.Seq.d/                       1037   0.0
SFB772 (SFB772Q) /CSM/SF/SFB7-C/SFB772Q.Seq.d/                       1035   0.0
CHA462 (CHA462Q) /CSM/CH/CHA4-C/CHA462Q.Seq.d/                       1023   0.0
AFF850 (AFF850Q) /CSM/AF/AFF8-C/AFF850Q.Seq.d/                       1021   0.0
CFJ668 (CFJ668Q) /CSM/CF/CFJ6-C/CFJ668Q.Seq.d/                       1003   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

X57149|X57149.1 D.discoideum EB4 gene for prespore vesicle protein.   954   0.0    4
AC117075|AC117075.2 Dictyostelium discoideum chromosome 2 map 5201047-5455781 strain AX4, complete sequence.   954   0.0    6
M11028|M11028.1 Slime mold (D.discoideum) prespore EB4 gene.      283   0.0    6
BX897742|BX897742.2 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone.    38   0.018  9
AC034161|AC034161.3 Homo sapiens chromosome 11 clone RP11-397J5, WORKING DRAFT SEQUENCE, 18 unordered pieces.    38   0.097  6
AC096910|AC096910.6 Rattus norvegicus clone CH230-77N18, *** SEQUENCING IN PROGRESS ***, 8 unordered pieces.    48   0.10   3
AC098992|AC098992.6 Rattus norvegicus clone CH230-199M20, *** SEQUENCING IN PROGRESS ***, 2 unordered pieces.    48   0.16   1
BB680188|BB680188.1 Mus musculus 12 days embryo female ovary cDNA, RIKEN full-length enriched library, clone:6620403D21, 3' end partial sequence.    48   0.16   1
AW728692|AW728692.1 GA__Ea0017M18 Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ea0017M18, mRNA sequence.    48   0.16   1
BD079026|BD079026.1 Mammalian gene participating in viral infection and tumor suppression.    48   0.16   1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S28358(S28358;S20090) prespore vesicle protein - slime mold (Dic...   357   2e-97
(P08798) RecName: Full=Prespore vesicle protein;          Short=...   357   2e-97
T22274(T22274)hypothetical protein F46B3.9 - Caenorhabditis eleg...    54   5e-06
AF245486_1(AF245486|pid:none) Polysphondylium pallidum spore coa...    53   7e-06
(Q04503) RecName: Full=Prespore protein Dp87; Flags: Precursor;        45   0.002
EU191620_1(EU191620|pid:none) Rhipicephalus microplus strain Moz...    45   0.002
EU352677_1(EU352677|pid:none) Rhipicephalus microplus isolate Ca...    45   0.002
D13973_1(D13973|pid:none) Dictyostelium discoideum gene for Dp87...    44   0.006
EU191621_1(EU191621|pid:none) Rhipicephalus annulatus strain Isr...    42   0.016
AE014297_4001(AE014297|pid:none) Drosophila melanogaster chromos...    40   0.047

 psg: 0.70  gvh: 0.38  alm: 0.47  top: 0.53  tms: 0.00  mit: 0.20  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: cytoplasmic
	 32.0 %: nuclear
	  8.0 %: cytoskeletal
	  8.0 %: mitochondrial

>> prediction for CFH347 is cyt

>CFH347F.Seq
ATTTTTTTTTATTAAATAAAATATATAGTAACATTAGATTAGTAATAATATAATATAATA
TTACAAAAAGAAAATTTATTTTTTATCAAATTTGAGAAAAAAAAAA----------

>CFH347Z.Seq
----------AGAAGGTGAAATTTGTGTTTTAGAACATGGTGTTTTGGGTTGTCTTGAAA
ATCCAGTTGAAGATAGTAAAGCAAATTGTGGTTTATTCCATTGTAATTACAATGAATATT
GTATTATGGTTAATGGTTATCTTTAATGTTTATTCTCAAATGGTACTGCACCATTTGCAT
GTGGTCTCCAAACTTGTGTTCCACCACAATTATGTGTAAAGGTTGAAAATTGTCAACAAT
GTGTTTCTCCACCAAGACCAGACAATAACTGTGGTGACAAATATTGTGATGATGAACATC
AATGTGTTAGAAAAGGACTCGGTTATGAATGTATTCCAAAACGTCTTACTTGTGAGACCA
AAAAATGCGAAGCCTCTCAAGTTTGTATCATGGTAAATGGTGATGCTCAATGTATCGTAC
CACCAGCTGCCGCCGCTGCTGAAATTAGAATAAACAATTTCAGATTCAACCGTAACTCTG
TTCAACGTAATGCCAAACCAGCTCAACAACAAAGATCTGCTCAACATGCCAAACCAGCTC
AACATGGTAAACCAGCTCAACATGTCGCTCA

>CFH347P.Seq
ATTTTTTTTTATTAAATAAAATATATAGTAACATTAGATTAGTAATAATATAATATAATA
TTACAAAAAGAAAATTTATTTTTTATCAAATTTGAGAAAAAAAAAA----------AGAA
GGTGAAATTTGTGTTTTAGAACATGGTGTTTTGGGTTGTCTTGAAAATCCAGTTGAAGAT
AGTAAAGCAAATTGTGGTTTATTCCATTGTAATTACAATGAATATTGTATTATGGTTAAT
GGTTATCTTTAATGTTTATTCTCAAATGGTACTGCACCATTTGCATGTGGTCTCCAAACT
TGTGTTCCACCACAATTATGTGTAAAGGTTGAAAATTGTCAACAATGTGTTTCTCCACCA
AGACCAGACAATAACTGTGGTGACAAATATTGTGATGATGAACATCAATGTGTTAGAAAA
GGACTCGGTTATGAATGTATTCCAAAACGTCTTACTTGTGAGACCAAAAAATGCGAAGCC
TCTCAAGTTTGTATCATGGTAAATGGTGATGCTCAATGTATCGTACCACCAGCTGCCGCC
GCTGCTGAAATTAGAATAAACAATTTCAGATTCAACCGTAACTCTGTTCAACGTAATGCC
AAACCAGCTCAACAACAAAGATCTGCTCAACATGCCAAACCAGCTCAACATGGTAAACCA
GCTCAACATGTCGCTCA