>AFE708 (AFE708Q) /CSM/AF/AFE7-A/AFE708Q.Seq.d/
XXXXXXXXXXCCATTCAATTGATGGAATTTGAAGATGCCTTAAAGTATCGTTTCAATCCA
TTCGATGTAACAAAGATTTGGTCACACAAAGACTATCCATTAATTCAAATTGGTCGTATG
GTTTTGAATCGTAATCCAGAGAATTACTTTGCTGAAGTTGAACAAGCTGCCTTCTCACCA
TCCCACATGGTTCCAGGTATTGAACCATCACCAGATAAGATGTTACAAGGTCGTCTCTTC
TCTTATCCAGATACTCATCGTCATCGTTTAGGTGTAAACTATCAACAAATCCCAGTCAAT
TGTCCATTCGCCGTAAAGGGTGGTGTTAAAAACTACCAACGTGATGGTTTCATGGCTGTC
AATGGTAATGGTGGTAAAGGTCCAAACTATCAACCAAACTCTTTCGGTGGTCCAGAGCCA
CATCCAGAATTTGCTCAACATAAATTTGACGTCTCTGGTTTCGCTGCTCGTCAACCATAC
AATCATCCAAATGACGACTTTGTTCAACCAGGTGATTTATATAGACTCATGTCTGAAGAT
GCCAAATCTCGTTTCGTCTCTAATTTAGTCGGTCACATGTCCGGTGTCACCATCAAAGAA
ATTCAAGTTCGTGCCGTTTCAAACTTTTACAAGGCTGACAAAGATTTAGGTGCTCGTTTA
TGTAAGGGTCTTGGTATTGATGTTAANATGTCATCAAATTCGCTGCTAGATCAAACTGTA
AATCAATA

---IQLMEFEDALKYRFNPFDVTKIWSHKDYPLIQIGRMVLNRNPENYFAEVEQAAFSPS
HMVPGIEPSPDKMLQGRLFSYPDTHRHRLGVNYQQIPVNCPFAVKGGVKNYQRDGFMAVN
GNGGKGPNYQPNSFGGPEPHPEFAQHKFDVSGFAARQPYNHPNDDFVQPGDLYRLMSEDA
KSRFVSNLVGHMSGVTIKEIQVRAVSNFYKADKDLGARLCKGLGIDVXMSSNSLLDQTVN
Q

Frame A:
---hsidgi*rclkvsfqsircnkdlvtqrlsinsnwsygfes*srellc*s*tscllti
phgsry*titr*dvtrsslllsryssssfrcklstnpsqlsirrkgwc*klpt*wfhgcq
w*ww*rsklstklfrwsratsricst*i*rlwfrcsstiqssk*rlcstr*fi*thv*rc
qisfrl*fsrshvrchhqrnssscrfkllqg*qrfrcsfm*gswy*c*xvikfaarsnck
si


Frame B:
---IQLMEFEDALKYRFNPFDVTKIWSHKDYPLIQIGRMVLNRNPENYFAEVEQAAFSPS
HMVPGIEPSPDKMLQGRLFSYPDTHRHRLGVNYQQIPVNCPFAVKGGVKNYQRDGFMAVN
GNGGKGPNYQPNSFGGPEPHPEFAQHKFDVSGFAARQPYNHPNDDFVQPGDLYRLMSEDA
KSRFVSNLVGHMSGVTIKEIQVRAVSNFYKADKDLGARLCKGLGIDVXMSSNSLLDQTVN
Q


Frame C:
---fn*wnlkmp*sivsihsm*qrfghtktih*fklvvwf*iviqritllklnklpshhp
twfqvlnhhqircykvvssliqiliviv*v*tinksqsivhsp*rvvlkttnvmvswlsm
vmvvkvqtinqtlsvvqshiqnllninltslvsllvnhtiiqmttlfnqviyidsclkmp
nlvssli*svtcpvspskkfkfvpfqtftrltki*vlvyvrvlvlmlxchqirc*ikl*i
n

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AFE708 (AFE708Q) /CSM/AF/AFE7-A/AFE708Q.Seq.d/                       1417   0.0
CFI634 (CFI634Q) /CSM/CF/CFI6-B/CFI634Q.Seq.d/                       1415   0.0
CFI568 (CFI568Q) /CSM/CF/CFI5-C/CFI568Q.Seq.d/                       1403   0.0
CFA669 (CFA669Q) /CSM/CF/CFA6-C/CFA669Q.Seq.d/                       1403   0.0
AFE574 (AFE574Q) /CSM/AF/AFE5-D/AFE574Q.Seq.d/                       1403   0.0
AFE294 (AFE294Q) /CSM/AF/AFE2-D/AFE294Q.Seq.d/                       1403   0.0
AFE230 (AFE230Q) /CSM/AF/AFE2-B/AFE230Q.Seq.d/                       1403   0.0
VFH727 (VFH727Q) /CSM/VF/VFH7-B/VFH727Q.Seq.d/                       1396   0.0
SFK640 (SFK640Q) /CSM/SF/SFK6-B/SFK640Q.Seq.d/                       1390   0.0
SFJ685 (SFJ685Q) /CSM/SF/SFJ6-D/SFJ685Q.Seq.d/                       1390   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AF090443|AF090443.1 Dictyostelium discoideum catalase (cat) mRNA, complete cds.  1340  0.0  2
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4, complete sequence.  1340  0.0  2
AB064338|AB064338.1 Candida boidinii CTA1 gene for peroxisomal catalase, complete cds.    82  7e-15  2
AJ400965|AJ400965.1 Proteus mirabilis ORF1 DNA, katA gene and menE gene, strain PR.    76  8e-15  2
AJ400964|AJ400964.1 Proteus mirabilis ORF1 DNA, katA gene and menE gene, wild type.    76  8e-15  2
E65314|E65314.1 Novel catalase, gene of said catalase and composition containing  said  catalase, and process for preparing catalase using the genetic engineering  technology.    86  7e-13  1
CC133697|CC133697.1 NDL.83G19.SP6 Notre Dame Liverpool Aedes aegypti genomic clone NDL.83G19, DNA sequence.    46  3e-12  5
BX554380|BX554380.1 Glossina morsitans morsitans (Tseatse fly) EST from adult infected  midgut library, clone Tse15b01_q1c.    74  3e-09  1
BX554266|BX554266.1 Glossina morsitans morsitans (Tseatse fly) EST from adult infected  midgut library, clone Tse14d06_q1c.    74  3e-09  1
BX564920|BX564920.1 Glossina morsitans morsitans (Tseatse fly) EST from adult infected  midgut library, clone Tse74e09_q1c.    74  3e-09  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF090443_1(AF090443|pid:none) Dictyostelium discoideum catalase ...   472   e-132
CQ796333_1(CQ796333|pid:none) Sequence 109 from Patent WO2004027...   275   8e-73
AE017333_3935(AE017333|pid:none) Bacillus licheniformis DSM 13, ...   275   8e-73
CP000560_826(CP000560|pid:none) Bacillus amyloliquefaciens FZB42...   270   2e-71
CP000300_481(CP000300|pid:none) Methanococcoides burtonii DSM 62...   267   2e-70
(P26901) RecName: Full=Vegetative catalase;          EC=1.11.1.6...   261   1e-68
(O93662) RecName: Full=Catalase;          EC=1.11.1.6;  &AJ00593...   261   2e-68
AY378080_1(AY378080|pid:none) Tetrahymena thermophila putative c...   257   2e-67
(Q9PWF7) RecName: Full=Catalase;          EC=1.11.1.6;  &AB03187...   251   2e-65
AY242059_1(AY242059|pid:none) Melopsittacus undulatus catalase (...   246   4e-64

 psg: 0.75  gvh: 0.22  alm: 0.48  top: 0.53  tms: 0.00  mit: 0.15  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: nuclear
	 24.0 %: cytoplasmic
	  8.0 %: cytoskeletal
	  8.0 %: mitochondrial
	  4.0 %: Golgi
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system

>> prediction for AFE708 is nuc

>AFE708Z.Seq
----------CCATTCAATTGATGGAATTTGAAGATGCCTTAAAGTATCGTTTCAATCCA
TTCGATGTAACAAAGATTTGGTCACACAAAGACTATCCATTAATTCAAATTGGTCGTATG
GTTTTGAATCGTAATCCAGAGAATTACTTTGCTGAAGTTGAACAAGCTGCCTTCTCACCA
TCCCACATGGTTCCAGGTATTGAACCATCACCAGATAAGATGTTACAAGGTCGTCTCTTC
TCTTATCCAGATACTCATCGTCATCGTTTAGGTGTAAACTATCAACAAATCCCAGTCAAT
TGTCCATTCGCCGTAAAGGGTGGTGTTAAAAACTACCAACGTGATGGTTTCATGGCTGTC
AATGGTAATGGTGGTAAAGGTCCAAACTATCAACCAAACTCTTTCGGTGGTCCAGAGCCA
CATCCAGAATTTGCTCAACATAAATTTGACGTCTCTGGTTTCGCTGCTCGTCAACCATAC
AATCATCCAAATGACGACTTTGTTCAACCAGGTGATTTATATAGACTCATGTCTGAAGAT
GCCAAATCTCGTTTCGTCTCTAATTTAGTCGGTCACATGTCCGGTGTCACCATCAAAGAA
ATTCAAGTTCGTGCCGTTTCAAACTTTTACAAGGCTGACAAAGATTTAGGTGCTCGTTTA
TGTAAGGGTCTTGGTATTGATGTTAANATGTCATCAAATTCGCTGCTAGATCAAACTGTA
AATCAATA