CFG731
Library CF
(Link to library)
Clone ID CFG731
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig Contig-U15889-1
Original site URL
Representative seq. ID CFG731P
(Link to Original site)
Representative DNA sequence
>CFG731 (CFG731Q) /CSM/CF/CFG7-B/CFG731Q.Seq.d/
CAATTGTGTGTGTTTAATATAAATTTTGTAATAGTAGAATGTTAAAAAAACATAGAGTTT
TAATAATAGTAATTGTTATGACATTAGTTGTAATGATAAGTTATAGTTCAATATTAAATA
TAAATACAGCACAAACATCAATAAATAATCAAAAGAATGGAGTTGGTAATAAAAATGAAG
AGATGGATATTGACGATATGAAAAATGTTGAAAATGAAAAATTAGATGCAGAAATTTTAA
GAAAACAAAAGAGAGAAAGACAACAAAATGGTGAAAACGTCTTTGATGCAAATAATATTC
AAGTTGGGTTACCCGATAGTAATAATAATAATTTATTATTCGGAAATGAGGATGATATAC
CAATTCAAACTACATTAAAGAAAACAGATGATAAACTTTTAATTGAGTGTTTAGTAAGGA
GCATCAAAACAAAATAATCAATTATCAATTGAAAAAACCAXXXXXXXXXXATAATGGTGC
AAAAATGNAGATTTCAAGTTCTTACAAATTTGTAATGTCATTTGAGAATAGTGAAACCGA
TGATTATGTCACAGAGAAATTATTTGGTGTTTTCACCATTGGTTCCGTGCCCATCTATCA
TGGTGCCCCAAATGGTAAGAAATTCTTCCCATCCCCAAATGCCGGTATCTTTGTCAATGA
TTTTGAATCACCAGAGGATTTAGCTGCCCATTTGAAATTCTTGGATGAAAATGATGAAGA
GTATGAAAAATGTTTACAATGGAAAAAAACAGGCCCTACAAAAGATTGGATGGTGGTTAT
GGACCAACTCAAGGCAAATGGTGATTGTAGAACTTGTATCAAGGTTGCCGATCTTCAAAG
AAAAGAGGTTGGTATGGTTGTTAATAAAAATACCTCAATGCAATTAGTACCAAAATCATT
CACTCCAAATGATGGTATCGTTGTATTTATTAGAGAAAGAAATACTTTTTGGTTCACATC
GGTTGCAATACCTTATTCAACTACTTATGTCGAGTTGGTTGAAATCTTTTCAAACGCTTT
AAATCATAAAGGTGAAATTTATTCAGCTAACGATCTTTGGTCAAAAGAACCAATCATTGA
TTTCAAAATNAAAGATAAAACTATTAAATTAACTCAAAATCAAGAAATTGAAGTTTTATT
TGCAGATTTAGATTTCTTTGGCAAGTAAAAATACCACCAGGTAAGAAT
sequence update 2001. 6. 1
Translated Amino Acid sequence
ncvcli*il***nvkkt*sfnnsncydiscndkl*fnikykystnink*skewsw**k*r
dgy*ryekc*k*kircrnfkktkerkttkw*krl*ck*ysswvtr*****fiirk*g*yt
nsnyikenr**tfn*VFSKEHQNKIINYQLKKP---

---NGAKMXISSSYKFVMSFENSETDDYVTEKLFGVFTIGSVPIYHGAPNGKKFFPSPNA
GIFVNDFESPEDLAAHLKFLDENDEEYEKCLQWKKTGPTKDWMVVMDQLKANGDCRTCIK
VADLQRKEVGMVVNKNTSMQLVPKSFTPNDGIVVFIRERNTFWFTSVAIPYSTTYVELVE
IFSNALNHKGEIYSANDLWSKEPIIDFKXKDKTIKLTQNQEIEVLFADLDFFGK*kyhqv
r


Translated Amino Acid sequence (All Frames)
Frame A:
qlcvfninfvivec*knief****ll*h*l***vivqy*i*iqhkhq*iikrmelvikmk
rwilti*kmlkmkn*mqkf*enkrekdnkmvktslmqiifklgypiviiiiyysemrmiy
qfklh*rkqminf*lsv**gaskqnnqlsiekt---

---imvqkxrfqvltnl*chlrivkpmimsqrnylvfsplvpcpsimvpqmvrnsshpqm
pvslsmilnhqri*lpi*nswmkmmksmknvyngkkqalqkigwwlwtnsrqmvivelvs
rlpifkekrlvwllikipqcn*yqnhslqmmvslyllekeilfgshrlqyliqllmsswl
ksfqtl*iikvkfiqltifgqknqsliskxkiklln*lkikklkfylqi*islasknttr
*e

Frame B:
ncvcli*il***nvkkt*sfnnsncydiscndkl*fnikykystnink*skewsw**k*r
dgy*ryekc*k*kircrnfkktkerkttkw*krl*ck*ysswvtr*****fiirk*g*yt
nsnyikenr**tfn*VFSKEHQNKIINYQLKKP---

---*wcknxdfkflqicnvi*e**nr*lchreiiwcfhhwfrahlswcpkw*eilpipkc
rylcq*f*itrgfscpfeilg*k**rv*kmftmeknrpykrldggygptqgkw*l*nlyq
gcrsskkrgwygc**kylnaistkiihsk*wyrciy*rkkyflvhigcntlfnylcrvg*
nlfkrfks*r*nlfs*rslvkrtnh*fqnxr*ny*insksrn*sficrfrflwqvkippg
kn

Frame C:
ivcv*ykfcnsrmlkkhrvliivivmtlvvmisyssilnintaqtsinnqkngvgnknee
mdiddmknvenekldaeilrkqkrerqqngenvfdanniqvglpdsnnnnllfgneddip
iqttlkktddkllieclvrsiktk*siin*kn---

---NGAKMXISSSYKFVMSFENSETDDYVTEKLFGVFTIGSVPIYHGAPNGKKFFPSPNA
GIFVNDFESPEDLAAHLKFLDENDEEYEKCLQWKKTGPTKDWMVVMDQLKANGDCRTCIK
VADLQRKEVGMVVNKNTSMQLVPKSFTPNDGIVVFIRERNTFWFTSVAIPYSTTYVELVE
IFSNALNHKGEIYSANDLWSKEPIIDFKXKDKTIKLTQNQEIEVLFADLDFFGK*kyhqv
r

Homology vs CSM-cDNA

Score E
Sequences producing significant alignments: (bits) Value

CFG731 (CFG731Q) /CSM/CF/CFG7-B/CFG731Q.Seq.d/ 1711 0.0
SFD768 (SFD768Q) /CSM/SF/SFD7-C/SFD768Q.Seq.d/ 1336 0.0
CHE459 (CHE459Q) /CSM/CH/CHE4-C/CHE459Q.Seq.d/ 1322 0.0
AFN482 (AFN482Q) /CSM/AF/AFN4-D/AFN482Q.Seq.d/ 1322 0.0
SFE505 (SFE505Q) /CSM/SF/SFE5-A/SFE505Q.Seq.d/ 1320 0.0
CFC792 (CFC792Q) /CSM/CF/CFC7-D/CFC792Q.Seq.d/ 1316 0.0
AFK360 (AFK360Q) /CSM/AF/AFK3-C/AFK360Q.Seq.d/ 1316 0.0
CHB249 (CHB249Q) /CSM/CH/CHB2-C/CHB249Q.Seq.d/ 1310 0.0
AFL486 (AFL486Q) /CSM/AF/AFL4-D/AFL486Q.Seq.d/ 1294 0.0
AFN272 (AFN272Q) /CSM/AF/AFN2-C/AFN272Q.Seq.d/ 1292 0.0

own update 2009. 4. 4
Homology vs DNA

Score E
Sequences producing significant alignments: (bits) Value N

AE014819|AE014819.1 Plasmodium falciparum 3D7 chromosome 14 section 4 of 13 of the complete sequence. 42 5e-10 15
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4, complete sequence. 44 2e-09 14
AC117076|AC117076.2 Dictyostelium discoideum chromosome 2 map 5862124-6045772 strain AX4, complete sequence. 38 1e-07 12
AC116977|AC116977.2 Dictyostelium discoideum chromosome 2 map 5515173-5817331 strain AX4, complete sequence. 36 1e-07 14
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence. 42 8e-07 17
AL844506|AL844506.1 Plasmodium falciparum chromosome 7. 42 8e-07 18
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence. 42 9e-07 15
AE014831|AE014831.1 Plasmodium falciparum 3D7 chromosome 10 section 3 of 7 of the complete sequence. 34 1e-06 17
AC116963|AC116963.1 Dictyostelium discoideum chromosome 2 map 4790445-4846595 strain AX4, *** SEQUENCING IN PROGRESS ***, in ordered pieces. 34 1e-06 9
AL844505|AL844505.1 Plasmodium falciparum chromosome 6. 36 2e-06 21
dna update 2004. 1.30
Homology vs Protein

Score E
Sequences producing significant alignments: (bits) Value

AY557602_1(AY557602|pid:none) Medicago truncatula cultivar Jemal... 108 5e-22
Y18529_1(Y18529|pid:none) Vigna radiata mRNA for alpha-1,3-fucos... 107 6e-22
AY082444_1(AY082444|pid:none) Medicago sativa clone MS1-3FTa alp... 107 8e-22
DQ789145_1(DQ789145|pid:none) Lemna minor alpha-1,3-fucosyltrans... 103 2e-20
AJ618932_1(AJ618932|pid:none) Physcomitrella patens fuct gene fo... 102 2e-20
AJ429145_1(AJ429145|pid:none) Physcomitrella patens mRNA for alp... 102 3e-20
(Q9LJK1) RecName: Full=Glycoprotein 3-alpha-L-fucosyltransferase... 101 4e-20
AY302219_1(AY302219|pid:none) Arabidopsis thaliana alpha 1,3 fuc... 101 6e-20
AJ416755_1(AJ416755|pid:none) Medicago truncatula partial mRNA f... 101 6e-20
AJ891040_1(AJ891040|pid:none) Populus tremula x Populus alba mRN... 100 1e-19
protein update 2009. 5.14
PSORT

psg: 0.57 gvh: 0.37 alm: 0.44 top: 0.53 tms: 0.00 mit: 0.25 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

36.0 %: cytoplasmic
36.0 %: nuclear
12.0 %: mitochondrial
8.0 %: cytoskeletal
4.0 %: vacuolar
4.0 %: vesicles of secretory system

>> prediction for CFG731 is cyt

5' end seq. ID CFG731F
5' end seq.
>CFG731F.Seq
CAATTGTGTGTGTTTAATATAAATTTTGTAATAGTAGAATGTTAAAAAAACATAGAGTTT
TAATAATAGTAATTGTTATGACATTAGTTGTAATGATAAGTTATAGTTCAATATTAAATA
TAAATACAGCACAAACATCAATAAATAATCAAAAGAATGGAGTTGGTAATAAAAATGAAG
AGATGGATATTGACGATATGAAAAATGTTGAAAATGAAAAATTAGATGCAGAAATTTTAA
GAAAACAAAAGAGAGAAAGACAACAAAATGGTGAAAACGTCTTTGATGCAAATAATATTC
AAGTTGGGTTACCCGATAGTAATAATAATAATTTATTATTCGGAAATGAGGATGATATAC
CAATTCAAACTACATTAAAGAAAACAGATGATAAACTTTTAATTGAGTGTTTAGTAAGGA
GCATCAAAACAAAATAATCAATTATCAATTGAAAAAACCA----------
Length of 5' end seq. 460
3' end seq. ID CFG731Z
3' end seq.
>CFG731Z.Seq
----------ATAATGGTGCAAAAATGNAGATTTCAAGTTCTTACAAATTTGTAATGTCA
TTTGAGAATAGTGAAACCGATGATTATGTCACAGAGAAATTATTTGGTGTTTTCACCATT
GGTTCCGTGCCCATCTATCATGGTGCCCCAAATGGTAAGAAATTCTTCCCATCCCCAAAT
GCCGGTATCTTTGTCAATGATTTTGAATCACCAGAGGATTTAGCTGCCCATTTGAAATTC
TTGGATGAAAATGATGAAGAGTATGAAAAATGTTTACAATGGAAAAAAACAGGCCCTACA
AAAGATTGGATGGTGGTTATGGACCAACTCAAGGCAAATGGTGATTGTAGAACTTGTATC
AAGGTTGCCGATCTTCAAAGAAAAGAGGTTGGTATGGTTGTTAATAAAAATACCTCAATG
CAATTAGTACCAAAATCATTCACTCCAAATGATGGTATCGTTGTATTTATTAGAGAAAGA
AATACTTTTTGGTTCACATCGGTTGCAATACCTTATTCAACTACTTATGTCGAGTTGGTT
GAAATCTTTTCAAACGCTTTAAATCATAAAGGTGAAATTTATTCAGCTAACGATCTTTGG
TCAAAAGAACCAATCATTGATTTCAAAATNAAAGATAAAACTATTAAATTAACTCAAAAT
CAAGAAATTGAAGTTTTATTTGCAGATTTAGATTTCTTTGGCAAGTAAAAATACCACCAG
GTAAGAAT
Length of 3' end seq. 718
Connected seq. ID CFG731P
Connected seq.
>CFG731P.Seq
CAATTGTGTGTGTTTAATATAAATTTTGTAATAGTAGAATGTTAAAAAAACATAGAGTTT
TAATAATAGTAATTGTTATGACATTAGTTGTAATGATAAGTTATAGTTCAATATTAAATA
TAAATACAGCACAAACATCAATAAATAATCAAAAGAATGGAGTTGGTAATAAAAATGAAG
AGATGGATATTGACGATATGAAAAATGTTGAAAATGAAAAATTAGATGCAGAAATTTTAA
GAAAACAAAAGAGAGAAAGACAACAAAATGGTGAAAACGTCTTTGATGCAAATAATATTC
AAGTTGGGTTACCCGATAGTAATAATAATAATTTATTATTCGGAAATGAGGATGATATAC
CAATTCAAACTACATTAAAGAAAACAGATGATAAACTTTTAATTGAGTGTTTAGTAAGGA
GCATCAAAACAAAATAATCAATTATCAATTGAAAAAACCA----------ATAATGGTGC
AAAAATGNAGATTTCAAGTTCTTACAAATTTGTAATGTCATTTGAGAATAGTGAAACCGA
TGATTATGTCACAGAGAAATTATTTGGTGTTTTCACCATTGGTTCCGTGCCCATCTATCA
TGGTGCCCCAAATGGTAAGAAATTCTTCCCATCCCCAAATGCCGGTATCTTTGTCAATGA
TTTTGAATCACCAGAGGATTTAGCTGCCCATTTGAAATTCTTGGATGAAAATGATGAAGA
GTATGAAAAATGTTTACAATGGAAAAAAACAGGCCCTACAAAAGATTGGATGGTGGTTAT
GGACCAACTCAAGGCAAATGGTGATTGTAGAACTTGTATCAAGGTTGCCGATCTTCAAAG
AAAAGAGGTTGGTATGGTTGTTAATAAAAATACCTCAATGCAATTAGTACCAAAATCATT
CACTCCAAATGATGGTATCGTTGTATTTATTAGAGAAAGAAATACTTTTTGGTTCACATC
GGTTGCAATACCTTATTCAACTACTTATGTCGAGTTGGTTGAAATCTTTTCAAACGCTTT
AAATCATAAAGGTGAAATTTATTCAGCTAACGATCTTTGGTCAAAAGAACCAATCATTGA
TTTCAAAATNAAAGATAAAACTATTAAATTAACTCAAAATCAAGAAATTGAAGTTTTATT
TGCAGATTTAGATTTCTTTGGCAAGTAAAAATACCACCAGGTAAGAAT
Length of connected seq. 1178
Full length Seq ID -
Full length Seq. -
Length of full length seq. -