CFG374
Library CF
(Link to library)
Clone ID CFG374
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig Contig-U13985-1
Original site URL
Representative seq. ID CFG374Z
(Link to Original site)
Representative DNA sequence
>CFG374 (CFG374Q) /CSM/CF/CFG3-D/CFG374Q.Seq.d/
XXXXXXXXXXCTTTGCCTATCATCCACATGGTATCATTAGTATTGGTGCTTTTTGTAATT
TCGCTACAAATGCTAATAATATTGACGAAAAATTACCTGGTTTAAAAGTACATTTATTAA
CATTAGAATCAAATTTTAAAATACCATTTTTAAGAGATGTTTTAATGAGTTTTGGTATGT
CATCAGTTTCAAAGAAAAGTTGTGAAAATATTTTAAATTCAGGAGCTGGTGAATCAATTT
GTTTGGTAGTTGGTGGAGCAGAGGAATCACTAGACGCCCGTCCTGGGCTTAATGAAATTA
CATTGAAAAAGAGAAAAGGTTTCATTAAATTAGCATTGGTAAATGGTGCATCATTAGTAC
CAGTTTATTCATTTGGTGAAAATGATATCTATGATCAAGTACCAAATCCACGTGGTTCAT
TAGTTAGAAAGATTCAAACTAAAATCAAAGATCTAACTGGTATCGCACCACCATTATTCA
TGGGTAGAGGAATTTTTAATTATGATTTTGGTTTATTACCAGTTAGACATAAAATCGTTA
CTGTTGTTGGCGAACCAATTGATATACCAAAGATTAAATCACCTACTGATCAAGTTATTG
AACATTATCATCAAATTTATGTTGAAGCACTTCAAAATTATTNACAAACACAAAAATTCT
TGTGCNATAAAGAAACNGAAATTTAAAA
sequence update 2001. 6. 1
Translated Amino Acid sequence
---FAYHPHGIISIGAFCNFATNANNIDEKLPGLKVHLLTLESNFKIPFLRDVLMSFGMS
SVSKKSCENILNSGAGESICLVVGGAEESLDARPGLNEITLKKRKGFIKLALVNGASLVP
VYSFGENDIYDQVPNPRGSLVRKIQTKIKDLTGIAPPLFMGRGIFNYDFGLLPVRHKIVT
VVGEPIDIPKIKSPTDQVIEHYHQIYVEALQNYXQTQKFLCXKETEI*


Translated Amino Acid sequence (All Frames)
Frame A:
---FAYHPHGIISIGAFCNFATNANNIDEKLPGLKVHLLTLESNFKIPFLRDVLMSFGMS
SVSKKSCENILNSGAGESICLVVGGAEESLDARPGLNEITLKKRKGFIKLALVNGASLVP
VYSFGENDIYDQVPNPRGSLVRKIQTKIKDLTGIAPPLFMGRGIFNYDFGLLPVRHKIVT
VVGEPIDIPKIKSPTDQVIEHYHQIYVEALQNYXQTQKFLCXKETEI*


Frame B:
---lpiihmvslvlvlfvislqmliiltknylv*kyiy*h*nqilkyhf*emf**vlvch
qfqrkvvkif*iqelvnqfvw*lveqrnh*tpvlglmklh*krekvsln*hw*mvhh*yq
fihlvkmismikyqihvvh*lerfklkski*lvshhhyswveeflimilvyyqldiksll
llanqliyqrlnhllikllniiikfmlkhfkiixkhknscaikkxkfk


Frame C:
---clsstwyh*ywcfl*frykc**y*rkitwfkstfinirikf*ntifkrcfnefwyvi
sfkekl*kyfkfrsw*inlfgswwsrgitrrpswa**nyiekekrfh*isigkwciists
lfiw*k*yl*sstkstwfis*kdsn*nqrsnwyrttiihg*rnf*l*fwfits*t*nryc
cwrtn*ytkd*ity*ssy*tlssnlc*stsklxtntkilvx*rnxnlk


Homology vs CSM-cDNA

Score E
Sequences producing significant alignments: (bits) Value

CFG374 (CFG374Q) /CSM/CF/CFG3-D/CFG374Q.Seq.d/ 1326 0.0
VFN116 (VFN116Q) /CSM/VF/VFN1-A/VFN116Q.Seq.d/ 1287 0.0
VFM760 (VFM760Q) /CSM/VF/VFM7-C/VFM760Q.Seq.d/ 1287 0.0
SSK819 (SSK819Q) /CSM/SS/SSK8-A/SSK819Q.Seq.d/ 1273 0.0
AFO140 (AFO140Q) /CSM/AF/AFO1-B/AFO140Q.Seq.d/ 1255 0.0
SHJ562 (SHJ562Q) /CSM/SH/SHJ5-C/SHJ562Q.Seq.d/ 38 0.17
SHE327 (SHE327Q) /CSM/SH/SHE3-B/SHE327Q.Seq.d/ 38 0.17
SHE123 (SHE123Q) /CSM/SH/SHE1-A/SHE123Q.Seq.d/ 38 0.17
SHD570 (SHD570Q) /CSM/SH/SHD5-C/SHD570Q.Seq.d/ 38 0.17
SHA827 (SHA827Q) /CSM/SH/SHA8-B/SHA827Q.Seq.d/ 38 0.17

own update 2004.12.25
Homology vs DNA

Score E
Sequences producing significant alignments: (bits) Value N

AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence. 28 1e-04 19
AL844506|AL844506.1 Plasmodium falciparum chromosome 7. 38 0.002 19
AP005514|AP005514.2 Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0035A24. 36 0.002 7
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence. 34 0.007 15
BX640523|BX640523.5 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH211-271E10. 44 0.007 6
AC146719|AC146719.9 Medicago truncatula clone mth2-17f11, WORKING DRAFT SEQUENCE, 7 ordered pieces. 48 0.009 5
AP006628|AP006628.1 Onion yellows phytoplasma DNA, complete genome. 30 0.009 17
AC102182|AC102182.4 Mus musculus clone RP24-134E18, WORKING DRAFT SEQUENCE, 3 unordered pieces. 34 0.015 6
AC115577|AC115577.2 Dictyostelium discoideum chromosome 2 map 4657875-4914984 strain AX4, complete sequence. 32 0.015 11
AC003983|AC003983.1 Human PAC clone RP1-93I3 from Xq23, complete sequence. 48 0.022 6
dna update 2004. 1.29
Homology vs Protein

Score E
Sequences producing significant alignments: (bits) Value

(Q54GC1) RecName: Full=Diacylglycerol O-acyltransferase; ... 424 e-117
AE017346_56(AE017346|pid:none) Cryptococcus neoformans var. neof... 242 6e-63
(Q96UY1) RecName: Full=Diacylglycerol O-acyltransferase 2B; ... 237 3e-61
CP000593_99(CP000593|pid:none) Ostreococcus lucimarinus CCE9901 ... 222 9e-57
AB073384_1(AB073384|pid:none) Homo sapiens infant liver cDNA, cl... 221 2e-56
CR954213_110(CR954213|pid:none) Ostreococcus tauri strain OTTH05... 219 4e-56
(Q9DCV3) RecName: Full=Diacylglycerol O-acyltransferase 2; ... 218 1e-55
AF003384_4(AF003384|pid:none) Caenorhabditis elegans cosmid K07B... 218 1e-55
(Q70VZ8) RecName: Full=Diacylglycerol O-acyltransferase 2; ... 218 1e-55
(Q5FVP8) RecName: Full=Diacylglycerol O-acyltransferase 2; ... 217 2e-55
protein update 2009. 5.14
PSORT

psg: 0.94 gvh: 0.42 alm: 0.39 top: 0.37 tms: 0.00 mit: 0.23 mip: 0.00
nuc: 0.04 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.50 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

36.0 %: cytoplasmic
36.0 %: nuclear
16.0 %: mitochondrial
4.0 %: cytoskeletal
4.0 %: vesicles of secretory system
4.0 %: endoplasmic reticulum

>> prediction for CFG374 is cyt

5' end seq. ID -
5' end seq. -
Length of 5' end seq. -
3' end seq. ID CFG374Z
3' end seq.
>CFG374Z.Seq
----------CTTTGCCTATCATCCACATGGTATCATTAGTATTGGTGCTTTTTGTAATT
TCGCTACAAATGCTAATAATATTGACGAAAAATTACCTGGTTTAAAAGTACATTTATTAA
CATTAGAATCAAATTTTAAAATACCATTTTTAAGAGATGTTTTAATGAGTTTTGGTATGT
CATCAGTTTCAAAGAAAAGTTGTGAAAATATTTTAAATTCAGGAGCTGGTGAATCAATTT
GTTTGGTAGTTGGTGGAGCAGAGGAATCACTAGACGCCCGTCCTGGGCTTAATGAAATTA
CATTGAAAAAGAGAAAAGGTTTCATTAAATTAGCATTGGTAAATGGTGCATCATTAGTAC
CAGTTTATTCATTTGGTGAAAATGATATCTATGATCAAGTACCAAATCCACGTGGTTCAT
TAGTTAGAAAGATTCAAACTAAAATCAAAGATCTAACTGGTATCGCACCACCATTATTCA
TGGGTAGAGGAATTTTTAATTATGATTTTGGTTTATTACCAGTTAGACATAAAATCGTTA
CTGTTGTTGGCGAACCAATTGATATACCAAAGATTAAATCACCTACTGATCAAGTTATTG
AACATTATCATCAAATTTATGTTGAAGCACTTCAAAATTATTNACAAACACAAAAATTCT
TGTGCNATAAAGAAACNGAAATTTAAAA
Length of 3' end seq. 678
Connected seq. ID -
Connected seq. -
Length of connected seq. -
Full length Seq ID -
Full length Seq. -
Length of full length seq. -