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Dicty_cDB
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
CFG333
Library CF
(Link to library)
Clone ID CFG333
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig Contig-U16358-1
Original site URL
Representative seq. ID CFG333P
(Link to Original site)
Representative DNA sequence 
>CFG333 (CFG333Q) /CSM/CF/CFG3-B/CFG333Q.Seq.d/
ACAAAAAACATTTTCTAATAAAACAGATAAATTAAAAAATGACTACCTTTAACGAATATC
CATTCTTGGCTGAATTAGGCATTAAAGCTGAAAATAATGATGGAGTCTTCAATGGAAAAT
GGGGAGGTGCTGGTGAAATCATCAAATGTTTAAATCCAACAAATAATAAAGTTATTGCAA
CTGTTAGAGGTGCTGCACCAGAAGAATATGAAACATGTATTCAAGCAATGTTAGCAGCAA
AAGTAAAATGGGCATTAACACCAGCTCCAAGAAGAGGTGAAATTGTTAGATTAATTGGTC
AAGCCATGAGAGAAAAAATTGAACCATTATCAAAATTAATTTCATTAGAAATGGGTAAAA
TTTACATTGAAGCTAAAGGTGAAGTACAAGAATTCATTGACGTATGCGATTATGCAACTG
GTTTAAGTAGATCAATCAATGGTCAAGTGATGCCATCTGAACGTCCAAATCACATTTTAA
TGGAAACCTGGAATCCATTAGGTTTAGTTGGTATCATTACTGCTTTCAATTTCCCATGTG
CCGTACTTGGTTGGAATGCTGCAATCTCAATGATTTGCGGGTAACGTCCAATXXXXXXXX
XXCGTTCTCTTTGCTTCTGTTGGTACCACTGGACAACGTTGTACCACTTGTAGACGTTTA
TTCGTTCACGAATCATTGTATGACACCATTTTGGAACGTTTAACCAAAGCCTACAAAACC
ATTAAAATCGGTAATCCACTTGAAGAAGGTGTTTTAGTAGATCCACTCCACACCCAAAGC
GCTGTTAAAGAATTCACTGAAGGTCTTGAAGAAATAAAAAAGCAAGGTGGTAAGGTCGTC
ATTGGTGGTAATAAACTCGATATCAGTGGTGGAAACTTTGTTGAACCAACCGTCGTTGCC
ATTGAACATGATGCTCCAATCGTAAAGACTGAACTCTTTGTTCCAATTCTCTACATAATG
AAATTCAAAAATCTTGACGATGCTTTTGCCTGGAATAATGAAGTCCCACAAGGTCTCTCA
TCTTCCCTCTTCACAAACAATCAAAAGAATATCTTCAAATGGCTTGGACCTACCGGATCT
GACTGTGGTATAGTTAACGTAAATGTAGCTACAAACGGTGCTGAAATTGGTGGTGCCTTT
GGAGGTGAAAAAGAGACCGGAGGTGGTAGAGAATCTGGCTCAGACAGCTGGAAACAGTAT
TGCCGTCGTAGTACTAATACAATCAAC
sequence update 2001. 6. 1
Translated Amino Acid sequence 
qktfsnktdklkndyl*risilg*irh*s*k**wslqwkmgrcw*nhqmfksnk**sycn
c*rcctrri*nmyssnvsskskmgintsskkr*nc*inwssherkn*tiikinfirng*n
lh*s*r*strih*rmrlcnwfk*inqwssdai*TSKSHFNGNLESIRFSWYHYCFQFPMC
RTWLECCNLNDLRVTSN---

---VLFASVGTTGQRCTTCRRLFVHESLYDTILERLTKAYKTIKIGNPLEEGVLVDPLHT
QSAVKEFTEGLEEIKKQGGKVVIGGNKLDISGGNFVEPTVVAIEHDAPIVKTELFVPILY
IMKFKNLDDAFAWNNEVPQGLSSSLFTNNQKNIFKWLGPTGSDCGIVNVNVATNGAEIGG
AFGGEKETGGGRESGSDSWKQYCRRSTNTIN
Translated Amino Acid sequence (All Frames) 
Frame A:
tknif**nr*ikk*lpltnihswln*alklkimmessmengevlvkssnv*iqqiikllq
llevlhqknmkhvfkqc*qqk*ngh*hqlqeevklld*lvkp*ekklnhyqn*fh*kwvk
ftlklkvkyknsltyaimqlv*vdqsmvk*chlnvqitf*wkpgih*v*lvslllsishv
pylvgmlqsq*fagnvq---

---rslcfcwyhwttlyhl*tfirsriiv*hhfgtfnqslqnh*nr*st*rrcfsrstph
pkrc*rih*rs*rnkkarw*grhww**tryqwwklc*tnrrch*t*csnrkd*tlcsnsl
hneiqks*rcfcle**sptrslifplhkqskeylqmawtyri*lwys*rkcsykrc*nww
clwr*krdrrw*riwlrqletvlps*y*ynq

Frame B:
qktfsnktdklkndyl*risilg*irh*s*k**wslqwkmgrcw*nhqmfksnk**sycn
c*rcctrri*nmyssnvsskskmgintsskkr*nc*inwssherkn*tiikinfirng*n
lh*s*r*strih*rmrlcnwfk*inqwssdai*TSKSHFNGNLESIRFSWYHYCFQFPMC
RTWLECCNLNDLRVTSN---

---VLFASVGTTGQRCTTCRRLFVHESLYDTILERLTKAYKTIKIGNPLEEGVLVDPLHT
QSAVKEFTEGLEEIKKQGGKVVIGGNKLDISGGNFVEPTVVAIEHDAPIVKTELFVPILY
IMKFKNLDDAFAWNNEVPQGLSSSLFTNNQKNIFKWLGPTGSDCGIVNVNVATNGAEIGG
AFGGEKETGGGRESGSDSWKQYCRRSTNTIN

Frame C:
kkhflikqin*kmttfneypflaelgikaenndgvfngkwggageiikclnptnnkviat
vrgaapeeyetciqamlaakvkwaltpaprrgeivrligqamrekieplsklislemgki
yieakgevqefidvcdyatglsrsingqvmpserpnhilmetwnplglvgiitafnfpca
vlgwnaaismicg*rp---

---fsllllvpldnvvplvdvysftnhcmtpfwnv*pkptkplksvihlkkvf**ihstp
kallknslkvlkk*kskvvrsslvvinsisvvetllnqpslplnmmlqs*rlnslfqfst
**nskiltmllpgimkshkvshlpssqtikrissngldlpdltvv*lt*m*lqtvlklvv
plevkkrpevvenlaqtagnsiavvvliqs
Homology vs CSM-cDNA 

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CFG333 (CFG333Q) /CSM/CF/CFG3-B/CFG333Q.Seq.d/                       2373   0.0
VFH586 (VFH586Q) /CSM/VF/VFH5-D/VFH586Q.Seq.d/                       1231   0.0
SLB181 (SLB181Q) /CSM/SL/SLB1-D/SLB181Q.Seq.d/                       1231   0.0
SFJ536 (SFJ536Q) /CSM/SF/SFJ5-B/SFJ536Q.Seq.d/                       1231   0.0
SFE588 (SFE588Q) /CSM/SF/SFE5-D/SFE588Q.Seq.d/                       1231   0.0
SFD368 (SFD368Q) /CSM/SF/SFD3-C/SFD368Q.Seq.d/                       1231   0.0
SFC881 (SFC881Q) /CSM/SF/SFC8-D/SFC881Q.Seq.d/                       1231   0.0
CHB718 (CHB718Q) /CSM/CH/CHB7-A/CHB718Q.Seq.d/                       1231   0.0
CHB340 (CHB340Q) /CSM/CH/CHB3-B/CHB340Q.Seq.d/                       1231   0.0
CFJ667 (CFJ667Q) /CSM/CF/CFJ6-C/CFJ667Q.Seq.d/                       1231   0.0
own update 2004.12.25
Homology vs DNA 

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC117072|AC117072.2 Dictyostelium discoideum chromosome 2 map 3323568-3470138 strain AX4, complete sequence.  1231   0.0    8
D88434|D88434.1 Malus domestica mRNA for protein abundantly expressed during apple fruit development, complete cds.    72   4e-17  2
BU042811|BU042811.1 PP_LEa0014A23f Peach developing fruit mesocarp Prunus persica cDNA clone PP_LEa0014A23f, mRNA sequence.    74   8e-12  2
AY034889|AY034889.1 Tortula ruralis aldehyde dehydrogenase ALDH2 (RNP129b) mRNA, complete cds.    46   3e-11  4
BU111535|BU111535.1 603126401F1 CSEQCHL13 Gallus gallus cDNA clone ChEST96a2 5', mRNA sequence.    42   1e-09  4
CB209980|CB209980.1 OML00260 Oryza minuta HybriZAP-2.1 XR library Oryza minuta cDNA 5', mRNA sequence.    68   2e-09  2
BU488446|BU488446.1 604125245F1 CSEQRBN36 Gallus gallus cDNA clone ChEST943i12 5', mRNA sequence.    42   2e-09  4
BU319046|BU319046.1 603486759F1 CSEQCHN62 Gallus gallus cDNA clone ChEST382f16 5', mRNA sequence.    42   2e-09  4
BU406760|BU406760.1 604140323F1 CSEQCHN59 Gallus gallus cDNA clone ChEST972m5 5', mRNA sequence.    42   2e-09  4
BU106121|BU106121.1 603006693F1 CSEQCHL01 Gallus gallus cDNA clone ChEST25i24 5', mRNA sequence.    42   2e-09  4
dna update 2004. 1.29
Homology vs Protein 

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P83401) RecName: Full=Putative aldehyde dehydrogenase family 7 ...   371   e-101
BC044367_1(BC044367|pid:none) Danio rerio aldehyde dehydrogenase...   231   5e-59
EF678715_1(EF678715|pid:none) Picea sitchensis clone WS0295_M17 ...   228   2e-58
BT044648_1(BT044648|pid:none) Salmo salar clone ssal-rgf-001-326...   225   3e-57
AF323586_1(AF323586|pid:none) Oryza sativa aldehyde dehydrogenas...   222   2e-56
AY883858_1(AY883858|pid:none) Sterkiella histriomuscorum turgor ...   221   4e-56
AY847462_1(AY847462|pid:none) Acanthopagrus schlegelii antiquiti...   219   1e-55
BT067707_1(BT067707|pid:none) Zea mays full-length cDNA clone ZM...   218   3e-55
AK297365_1(AK297365|pid:none) Homo sapiens cDNA FLJ56008 complet...   218   4e-55
(P49419) RecName: Full=Alpha-aminoadipic semialdehyde dehydrogen...   218   4e-55
protein update 2009. 5.14
PSORT 

 psg: 0.69  gvh: 0.47  alm: 0.41  top: 0.53  tms: 0.00  mit: 0.32  mip: 0.06
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: mitochondrial
	 36.0 %: nuclear
	 20.0 %: cytoplasmic
	  8.0 %: cytoskeletal

>> prediction for CFG333 is mit
5' end seq. ID CFG333F
5' end seq. 
>CFG333F.Seq
ACAAAAAACATTTTCTAATAAAACAGATAAATTAAAAAATGACTACCTTTAACGAATATC
CATTCTTGGCTGAATTAGGCATTAAAGCTGAAAATAATGATGGAGTCTTCAATGGAAAAT
GGGGAGGTGCTGGTGAAATCATCAAATGTTTAAATCCAACAAATAATAAAGTTATTGCAA
CTGTTAGAGGTGCTGCACCAGAAGAATATGAAACATGTATTCAAGCAATGTTAGCAGCAA
AAGTAAAATGGGCATTAACACCAGCTCCAAGAAGAGGTGAAATTGTTAGATTAATTGGTC
AAGCCATGAGAGAAAAAATTGAACCATTATCAAAATTAATTTCATTAGAAATGGGTAAAA
TTTACATTGAAGCTAAAGGTGAAGTACAAGAATTCATTGACGTATGCGATTATGCAACTG
GTTTAAGTAGATCAATCAATGGTCAAGTGATGCCATCTGAACGTCCAAATCACATTTTAA
TGGAAACCTGGAATCCATTAGGTTTAGTTGGTATCATTACTGCTTTCAATTTCCCATGTG
CCGTACTTGGTTGGAATGCTGCAATCTCAATGATTTGCGGGTAACGTCCAAT--------
--
Length of 5' end seq. 592
3' end seq. ID CFG333Z
3' end seq. 
>CFG333Z.Seq
----------CGTTCTCTTTGCTTCTGTTGGTACCACTGGACAACGTTGTACCACTTGTA
GACGTTTATTCGTTCACGAATCATTGTATGACACCATTTTGGAACGTTTAACCAAAGCCT
ACAAAACCATTAAAATCGGTAATCCACTTGAAGAAGGTGTTTTAGTAGATCCACTCCACA
CCCAAAGCGCTGTTAAAGAATTCACTGAAGGTCTTGAAGAAATAAAAAAGCAAGGTGGTA
AGGTCGTCATTGGTGGTAATAAACTCGATATCAGTGGTGGAAACTTTGTTGAACCAACCG
TCGTTGCCATTGAACATGATGCTCCAATCGTAAAGACTGAACTCTTTGTTCCAATTCTCT
ACATAATGAAATTCAAAAATCTTGACGATGCTTTTGCCTGGAATAATGAAGTCCCACAAG
GTCTCTCATCTTCCCTCTTCACAAACAATCAAAAGAATATCTTCAAATGGCTTGGACCTA
CCGGATCTGACTGTGGTATAGTTAACGTAAATGTAGCTACAAACGGTGCTGAAATTGGTG
GTGCCTTTGGAGGTGAAAAAGAGACCGGAGGTGGTAGAGAATCTGGCTCAGACAGCTGGA
AACAGTATTGCCGTCGTAGTACTAATACAATCAAC
Length of 3' end seq. 625
Connected seq. ID CFG333P
Connected seq. 
>CFG333P.Seq
ACAAAAAACATTTTCTAATAAAACAGATAAATTAAAAAATGACTACCTTTAACGAATATC
CATTCTTGGCTGAATTAGGCATTAAAGCTGAAAATAATGATGGAGTCTTCAATGGAAAAT
GGGGAGGTGCTGGTGAAATCATCAAATGTTTAAATCCAACAAATAATAAAGTTATTGCAA
CTGTTAGAGGTGCTGCACCAGAAGAATATGAAACATGTATTCAAGCAATGTTAGCAGCAA
AAGTAAAATGGGCATTAACACCAGCTCCAAGAAGAGGTGAAATTGTTAGATTAATTGGTC
AAGCCATGAGAGAAAAAATTGAACCATTATCAAAATTAATTTCATTAGAAATGGGTAAAA
TTTACATTGAAGCTAAAGGTGAAGTACAAGAATTCATTGACGTATGCGATTATGCAACTG
GTTTAAGTAGATCAATCAATGGTCAAGTGATGCCATCTGAACGTCCAAATCACATTTTAA
TGGAAACCTGGAATCCATTAGGTTTAGTTGGTATCATTACTGCTTTCAATTTCCCATGTG
CCGTACTTGGTTGGAATGCTGCAATCTCAATGATTTGCGGGTAACGTCCAAT--------
--CGTTCTCTTTGCTTCTGTTGGTACCACTGGACAACGTTGTACCACTTGTAGACGTTTA
TTCGTTCACGAATCATTGTATGACACCATTTTGGAACGTTTAACCAAAGCCTACAAAACC
ATTAAAATCGGTAATCCACTTGAAGAAGGTGTTTTAGTAGATCCACTCCACACCCAAAGC
GCTGTTAAAGAATTCACTGAAGGTCTTGAAGAAATAAAAAAGCAAGGTGGTAAGGTCGTC
ATTGGTGGTAATAAACTCGATATCAGTGGTGGAAACTTTGTTGAACCAACCGTCGTTGCC
ATTGAACATGATGCTCCAATCGTAAAGACTGAACTCTTTGTTCCAATTCTCTACATAATG
AAATTCAAAAATCTTGACGATGCTTTTGCCTGGAATAATGAAGTCCCACAAGGTCTCTCA
TCTTCCCTCTTCACAAACAATCAAAAGAATATCTTCAAATGGCTTGGACCTACCGGATCT
GACTGTGGTATAGTTAACGTAAATGTAGCTACAAACGGTGCTGAAATTGGTGGTGCCTTT
GGAGGTGAAAAAGAGACCGGAGGTGGTAGAGAATCTGGCTCAGACAGCTGGAAACAGTAT
TGCCGTCGTAGTACTAATACAATCAAC
Length of connected seq. 1217
Full length Seq ID -
Full length Seq. -
Length of full length seq. -