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Dicty_cDB
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
CFG326
Library CF
(Link to library)
Clone ID CFG326
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig -
Original site URL
Representative seq. ID CFG326P
(Link to Original site)
Representative DNA sequence 
>CFG326 (CFG326Q) /CSM/CF/CFG3-B/CFG326Q.Seq.d/
ATTATTGTTAAAATAAGAGTAAATATTAAATAATTAAATATTAAAAAATGTCATCAATTG
GTATTGATTTAGGTACAACATATTCATGTGTTGGTGTCTGGCAAAATGATCGTGTTGAAA
TTATTGCAAATGATCAAGGTAATAGAACCACTCCATCTTATGTTGCATTTACTGATACAG
AACGTTTAATTGGTGATGCTGCAAAGAATCAAGTTGCAATGAATCCAACCAATACAGTAT
TTGATGCTAAACGTTTAATTGGTCGTAAATTTAGTGACAAAGAAGTTCAAAGTGATATGA
AACATTGGCCATTCAAAGTTATTCCAAAGGATGGTGATAAGCCACATATTCAAGTTGAAT
TCAAAGGTGAAACTAAAGTTTTCTCACCAGAAGAAATCTCTTCAATGGTACTCTTAAAAA
TGAAAGAAACCGCTGAAGCTTATCTTGGTAAAACCATTAATAATGCTGTAATTACCGTTC
CAGCTTATTTCAATGATAGTCAACGTCAAGCAACCAAAGATGCTGGTACAATTTCAAAAT
TAAATGTTCAACGTATTATTAATGAACCAACTGCTGCTGCTATTGCTTATGGTTTAGAAA
AGGAAAGGTTCTGGTGAAAAGAATATTTTAATTTTCGATTTXXXXXXXXXXGTTTATGAA
GGTGAACGTGCTATGACCAAAGATAATAATTTTATTGGGTAAATTTGAACTTTCTGGTAT
TCCACCAGCACCAAGAGGTGTACCACAAGTTGAAGTTACATTTGATGTTGATGCAAATGG
TATCTTAAATGTATCAGCTGAAGATAAATCAACTGGTAACAAACAAAAGATTACAATTAC
CAATGATAAAGGTCGTCTTTCAAAAGAAGAAATTGAAAAAATGGTTGCTGATGCAGAGAA
ATTCAAACAACAAGATGAACAACAAAAAGATCGTGTTGAATCAAAGAATAAATTGGAAAA
TTATGCATTCACTGTTAAAAATTCAATTAAAGATGAAAAAGTTGCAGCCAAAATTTCAGA
TTCAGATAAATCAACTATTGAATCTGAAACTGAAAGTGTACTCAAATGGTTAGAATCAAA
TCAAACCGCAGAAAAGGATGAATATGAAGATAAGATGAAAGCCTTAGAAGCAGTTGTCAA
TCCAATCATGAGTAAACTCTATCAAGAAGGAGGTATGCCACAAGGTGGTGGTATGCCAGG
TGGTATGTCAAATGATTCACCAAAGAGTTCAAACAACAAAGTAGACGAATTAGATTGACG
GAATTTTTCAGAGGAAAACATCTCTATCAAATAGATTTCTTAAAAATATAGTAGTAAATC
AATAAGCTTCTCA
sequence update 2001. 6. 1
Translated Amino Acid sequence 
iivkirvnik*lnikkchqlvli*vqhihvlvsgkmivlkllqmikvieplhlmlhlliq
nv*lvmlqriklq*iqpiqylmlnv*lvvnlvtkkfkvi*nighsklfqrmvishifkln
skvklkfshqkkslqwys*k*kkplklilvkpliml*lpfqlismivnvkqpkmlvqfqn
*mfnvllmnqllllllmv*KRKGSGEKNILIFD---

---VYEGERAMTKDNNFIG*i*tfwyststkrctts*syi*c*ckwylkcis*r*inw*q
tkdynyq**rssfkrrn*kngc*creiqttr*ttkrsc*ike*igklcihc*kfn*r*ks
csqnfrfr*iny*i*n*kctqmvriksnrrkg*i*r*deslrsscqsnhe*tlsrrryat
rwwyarwyvk*ftkefkqqsrrirlteffrgkhlyqidflki***inkll
Translated Amino Acid sequence (All Frames) 
Frame A:
iivkirvnik*lnikkchqlvli*vqhihvlvsgkmivlkllqmikvieplhlmlhlliq
nv*lvmlqriklq*iqpiqylmlnv*lvvnlvtkkfkvi*nighsklfqrmvishifkln
skvklkfshqkkslqwys*k*kkplklilvkpliml*lpfqlismivnvkqpkmlvqfqn
*mfnvllmnqllllllmv*KRKGSGEKNILIFD---

---VYEGERAMTKDNNFIG*i*tfwyststkrctts*syi*c*ckwylkcis*r*inw*q
tkdynyq**rssfkrrn*kngc*creiqttr*ttkrsc*ike*igklcihc*kfn*r*ks
csqnfrfr*iny*i*n*kctqmvriksnrrkg*i*r*deslrsscqsnhe*tlsrrryat
rwwyarwyvk*ftkefkqqsrrirlteffrgkhlyqidflki***inkll

Frame B:
lllk*e*ilnn*ilknvinwy*frynifmcwclak*sc*nyck*sr**nhsilcciy*yr
tfnw*cckesscnesnqysi*c*tfnws*i**qrssk*yetlaiqsyskgw**atyss*i
qr*n*sfltrrnlfngtlknernr*slsw*nh**ccnyrsslfq**stssnqrcwynfki
kcstyy**tncccyclwfrkgkvlvkrif*fsi---

---fmkvnvl*pkiiillgkfelsgippaprgvpqvevtfdvdangilnvsaedkstgnk
qkititndkgrlskeeiekmvadaekfkqqdeqqkdrvesknklenyaftvknsikdekv
aakisdsdkstiesetesvlkwlesnqtaekdeyedkmkaleavvnpimsklyqeggmpq
gggmpggmsndspkssnnkvdeld*rnfseenisik*is*kyssksisfs

Frame C:
yc*nksky*iiky*kmssigidlgttyscvgvwqndrveiiandqgnrttpsyvaftdte
rligdaaknqvamnptntvfdakrligrkfsdkevqsdmkhwpfkvipkdgdkphiqvef
kgetkvfspeeissmvllkmketaeaylgktinnavitvpayfndsqrqatkdagtiskl
nvqriineptaaaiayglekerfw*keyfnfrf---

---l*r*tcydqr**fywvnlnflvfhqhqevyhklklhlmlmqmvs*myqlkinqlvtn
krlqlpmikvvfqkkklkkwllmqrnsnnkmnnkkivlnqrinwkimhsllkiqlkmkkl
qpkfqiqinqllnlklkvysng*nqikpqkrmnmkir*kp*kqlsiqs*vnsikkevchk
vvvcqvvcqmihqrvqttk*tn*idgifqrktslsnrflknivvnq*as
Homology vs CSM-cDNA 

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CFG326 (CFG326Q) /CSM/CF/CFG3-B/CFG326Q.Seq.d/                       2486   0.0
CFG318 (CFG318Q) /CSM/CF/CFG3-A/CFG318Q.Seq.d/                       1336   0.0
AFJ316 (AFJ316Q) /CSM/AF/AFJ3-A/AFJ316Q.Seq.d/                       1336   0.0
CHN521 (CHN521Q) /CSM/CH/CHN5-A/CHN521Q.Seq.d/                       1330   0.0
AFK130 (AFK130Q) /CSM/AF/AFK1-B/AFK130Q.Seq.d/                       1328   0.0
AFJ326 (AFJ326Q) /CSM/AF/AFJ3-B/AFJ326Q.Seq.d/                       1328   0.0
VFA339 (VFA339Q) /CSM/VF/VFA3-B/VFA339Q.Seq.d/                       1324   0.0
VHN188 (VHN188Q) /CSM/VH/VHN1-D/VHN188Q.Seq.d/                       1322   0.0
VHL301 (VHL301Q) /CSM/VH/VHL3-A/VHL301Q.Seq.d/                       1322   0.0
SFL341 (SFL341Q) /CSM/SF/SFL3-B/SFL341Q.Seq.d/                       1322   0.0
own update 2004.12.25
Homology vs DNA 

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

X75263|X75263.1 D.discoideum (AX3) mRNA for heat shock cognate protein (hsc70).  1221   0.0    2
L22736|L22736.1 Dictyostelium discoideum heat shock protein (hspB) gene,.  1213   0.0    2
AF025951|AF025951.1 Dictyostelium discoideum heat-shock cognate protein 70 (hsc70) mRNA, complete cds.   287   e-169  7
AC115684|AC115684.2 Dictyostelium discoideum chromosome 2 map 3108975-3191114 strain AX4, complete sequence.   287   e-160  11
A58313|A58313.1 Sequence 1 from Patent WO9636707.                 123   e-119  10
AX536934|AX536934.1 Sequence 535 from Patent WO02064766.          123   e-119  10
Z30210|Z30210.1 C.albicans (ATCC 20955) cahsp70 mRNA for heat shock protein 70.   123   e-119  10
AF221541|AF221541.1 Cryptosporidium serpentis heat shock protein 70 (HSP70) gene, partial cds.   145   e-116  11
AF221543|AF221543.1 Cryptosporidium muris isolate 707 heat shock protein 70 (HSP70) gene, partial cds.   123   e-106  10
AF221542|AF221542.1 Cryptosporidium muris isolate 589 heat shock protein 70 (HSP70) gene, partial cds.   109   e-105  10
dna update 2004. 1.29
Homology vs Protein 

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P36415) RecName: Full=Heat shock cognate 70 kDa protein 1;     ...   364   e-101
S37394(S37394) dnaK-type molecular chaperone hsc70 - slime mold ...   362   e-101
(Q557E0) RecName: Full=Heat shock cognate 70 kDa protein 2;     ...   342   2e-93
AF025951_1(AF025951|pid:none) Dictyostelium discoideum heat-shoc...   342   2e-93
(Q54BE0) RecName: Full=Heat shock cognate 70 kDa protein 3;           323   1e-86
U71151_1(U71151|pid:none) Pneumocystis carinii heat shock protei...   318   7e-86
U80967_1(U80967|pid:none) Pneumocystis carinii f. sp. carinii he...   318   7e-86
AY495382_1(AY495382|pid:none) Trypanosoma rangeli isolate Tre he...   318   3e-85
(P11145) RecName: Full=Heat shock 70 kDa protein 4; AltName: Ful...   316   1e-84
EF442767_1(EF442767|pid:none) Trypanosoma rangeli isolate H14 cl...   315   2e-84
protein update 2009. 5.14
PSORT 

 psg: 0.76  gvh: 0.21  alm: 0.64  top: 0.53  tms: 0.00  mit: 0.23  mip: 0.02
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: cytoplasmic
	 36.0 %: nuclear
	 16.0 %: mitochondrial
	 12.0 %: cytoskeletal

>> prediction for CFG326 is cyt
5' end seq. ID CFG326F
5' end seq. 
>CFG326F.Seq
ATTATTGTTAAAATAAGAGTAAATATTAAATAATTAAATATTAAAAAATGTCATCAATTG
GTATTGATTTAGGTACAACATATTCATGTGTTGGTGTCTGGCAAAATGATCGTGTTGAAA
TTATTGCAAATGATCAAGGTAATAGAACCACTCCATCTTATGTTGCATTTACTGATACAG
AACGTTTAATTGGTGATGCTGCAAAGAATCAAGTTGCAATGAATCCAACCAATACAGTAT
TTGATGCTAAACGTTTAATTGGTCGTAAATTTAGTGACAAAGAAGTTCAAAGTGATATGA
AACATTGGCCATTCAAAGTTATTCCAAAGGATGGTGATAAGCCACATATTCAAGTTGAAT
TCAAAGGTGAAACTAAAGTTTTCTCACCAGAAGAAATCTCTTCAATGGTACTCTTAAAAA
TGAAAGAAACCGCTGAAGCTTATCTTGGTAAAACCATTAATAATGCTGTAATTACCGTTC
CAGCTTATTTCAATGATAGTCAACGTCAAGCAACCAAAGATGCTGGTACAATTTCAAAAT
TAAATGTTCAACGTATTATTAATGAACCAACTGCTGCTGCTATTGCTTATGGTTTAGAAA
AGGAAAGGTTCTGGTGAAAAGAATATTTTAATTTTCGATTT----------
Length of 5' end seq. 641
3' end seq. ID CFG326Z
3' end seq. 
>CFG326Z.Seq
----------GTTTATGAAGGTGAACGTGCTATGACCAAAGATAATAATTTTATTGGGTA
AATTTGAACTTTCTGGTATTCCACCAGCACCAAGAGGTGTACCACAAGTTGAAGTTACAT
TTGATGTTGATGCAAATGGTATCTTAAATGTATCAGCTGAAGATAAATCAACTGGTAACA
AACAAAAGATTACAATTACCAATGATAAAGGTCGTCTTTCAAAAGAAGAAATTGAAAAAA
TGGTTGCTGATGCAGAGAAATTCAAACAACAAGATGAACAACAAAAAGATCGTGTTGAAT
CAAAGAATAAATTGGAAAATTATGCATTCACTGTTAAAAATTCAATTAAAGATGAAAAAG
TTGCAGCCAAAATTTCAGATTCAGATAAATCAACTATTGAATCTGAAACTGAAAGTGTAC
TCAAATGGTTAGAATCAAATCAAACCGCAGAAAAGGATGAATATGAAGATAAGATGAAAG
CCTTAGAAGCAGTTGTCAATCCAATCATGAGTAAACTCTATCAAGAAGGAGGTATGCCAC
AAGGTGGTGGTATGCCAGGTGGTATGTCAAATGATTCACCAAAGAGTTCAAACAACAAAG
TAGACGAATTAGATTGACGGAATTTTTCAGAGGAAAACATCTCTATCAAATAGATTTCTT
AAAAATATAGTAGTAAATCAATAAGCTTCTCA
Length of 3' end seq. 682
Connected seq. ID CFG326P
Connected seq. 
>CFG326P.Seq
ATTATTGTTAAAATAAGAGTAAATATTAAATAATTAAATATTAAAAAATGTCATCAATTG
GTATTGATTTAGGTACAACATATTCATGTGTTGGTGTCTGGCAAAATGATCGTGTTGAAA
TTATTGCAAATGATCAAGGTAATAGAACCACTCCATCTTATGTTGCATTTACTGATACAG
AACGTTTAATTGGTGATGCTGCAAAGAATCAAGTTGCAATGAATCCAACCAATACAGTAT
TTGATGCTAAACGTTTAATTGGTCGTAAATTTAGTGACAAAGAAGTTCAAAGTGATATGA
AACATTGGCCATTCAAAGTTATTCCAAAGGATGGTGATAAGCCACATATTCAAGTTGAAT
TCAAAGGTGAAACTAAAGTTTTCTCACCAGAAGAAATCTCTTCAATGGTACTCTTAAAAA
TGAAAGAAACCGCTGAAGCTTATCTTGGTAAAACCATTAATAATGCTGTAATTACCGTTC
CAGCTTATTTCAATGATAGTCAACGTCAAGCAACCAAAGATGCTGGTACAATTTCAAAAT
TAAATGTTCAACGTATTATTAATGAACCAACTGCTGCTGCTATTGCTTATGGTTTAGAAA
AGGAAAGGTTCTGGTGAAAAGAATATTTTAATTTTCGATTT----------GTTTATGAA
GGTGAACGTGCTATGACCAAAGATAATAATTTTATTGGGTAAATTTGAACTTTCTGGTAT
TCCACCAGCACCAAGAGGTGTACCACAAGTTGAAGTTACATTTGATGTTGATGCAAATGG
TATCTTAAATGTATCAGCTGAAGATAAATCAACTGGTAACAAACAAAAGATTACAATTAC
CAATGATAAAGGTCGTCTTTCAAAAGAAGAAATTGAAAAAATGGTTGCTGATGCAGAGAA
ATTCAAACAACAAGATGAACAACAAAAAGATCGTGTTGAATCAAAGAATAAATTGGAAAA
TTATGCATTCACTGTTAAAAATTCAATTAAAGATGAAAAAGTTGCAGCCAAAATTTCAGA
TTCAGATAAATCAACTATTGAATCTGAAACTGAAAGTGTACTCAAATGGTTAGAATCAAA
TCAAACCGCAGAAAAGGATGAATATGAAGATAAGATGAAAGCCTTAGAAGCAGTTGTCAA
TCCAATCATGAGTAAACTCTATCAAGAAGGAGGTATGCCACAAGGTGGTGGTATGCCAGG
TGGTATGTCAAATGATTCACCAAAGAGTTCAAACAACAAAGTAGACGAATTAGATTGACG
GAATTTTTCAGAGGAAAACATCTCTATCAAATAGATTTCTTAAAAATATAGTAGTAAATC
AATAAGCTTCTCA
Length of connected seq. 1323
Full length Seq ID -
Full length Seq. -
Length of full length seq. -