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Dicty_cDB
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
CFG261
Library CF
(Link to library)
Clone ID CFG261
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig Contig-U13873-1
Original site URL
Representative seq. ID CFG261P
(Link to Original site)
Representative DNA sequence 
>CFG261 (CFG261Q) /CSM/CF/CFG2-C/CFG261Q.Seq.d/
ATTTTAATAATTATAATTTTAAAAAATGAGTATTGAATCAATTAAAGCTAGAGAAATTTT
GGATAGTAGAGGTAATCCAACATTAGAAGTTGAAGTATGGACAAGTGAAGGAATGTTTTC
AGCCAAAGTACCAAGTGGAGCATCAACTGGTATTCATGAAGCATTTGAATTAAGAGATGG
TGATAAAAGTCGTTATTTTGGATATGGTGTTTTGAATGCAATTGTTAATGTAAATAATTT
AATATCACCAACATTGAAAGGTATGAGAGTTGATAATCAAAAAGCAATAGATGATAAAAT
GATTGAATTGGATGGTACAAAGAATAAATCAAAACTTGGGTCCAATGCAATCGTTGGTGT
ATCAATGGCAGTGGCAAGAGCAGCCGCTTCTATTAAAGGTGTGCCCCTGTACCGTTACAT
TTCACAATTGGCTGGAAATAGTAATATTCGTTTACCAGTACCATGTTTTAATGTTATTAA
TGGTGGAAAACATGCAGGTAATAGACTACCATTTCAAGAGTTTATGCTAGTACCCATTGG
TGCACCAAAATTTAAAGAAGCATTGCGTTATGGTTCAGAAGTCTACCATTCACTCAAAGA
GATCATCAAXXXXXXXXXXGAAGAAGCATTAACTCTGTTAGTGGATGCTATCAATCATTC
GGGCTATCAAGATGTTATTAAAATTGGTATTGATTCTGCTGCTTCAGAATTTTGGAATCC
AAAGACTTCAAAATATGATATGGATTTCAAGAATATAGGATCCTCACATTTGAAGTCTAG
TTTAAATAGTGGTGAGCAATTAATGTCTAGATATTTAGAGATTTTAAAAAAGTATCCAAT
TGCATTCTTTGAAGGTCCATTTGGTGAAGATGATTGGGAAAATCATGGTAAAATTACAGC
TGCAATTGGTAATAGAATTCAAATCATTGGTGATGATTTACTTTGTACAAATCCAGAAAG
AATTAAAAAAGCAATTTCTGAGAAAACTGTAAATTCATTATTATTGAAAATAAATCAAAT
CGGTACACTAACTGAAACTATTGAAGCTGCAAAACTTGCAAAAGAAGCTGGTTGGGGTTG
TTTAGTTAGTCATCGTTCAGGTGAAACTGATGATCATTTCATTGCTGATCTTGTAGTTGG
TCTTGGTACTGGTGAAATAAAATCTGGTGCACCTTGTAGATTGAAAGATTATCAAAATAT
AATAGATTAATGAAAATTAAGAAGAACTTAAAAACTTCATAGATCAAAGGTATTCATT
sequence update 2001. 6. 1
Translated Amino Acid sequence 
f**l*f*KMSIESIKAREILDSRGNPTLEVEVWTSEGMFSAKVPSGASTGIHEAFELRDG
DKSRYFGYGVLNAIVNVNNLISPTLKGMRVDNQKAIDDKMIELDGTKNKSKLGSNAIVGV
SMAVARAAASIKGVPLYRYISQLAGNSNIRLPVPCFNVINGGKHAGNRLPFQEFMLVPIG
APKFKEALRYGSEVYHSLKEII---

---EEALTLLVDAINHSGYQDVIKIGIDSAASEFWNPKTSKYDMDFKNIGSSHLKSSLNS
GEQLMSRYLEILKKYPIAFFEGPFGEDDWENHGKITAAIGNRIQIIGDDLLCTNPERIKK
AISEKTVNSLLLKINQIGTLTETIEAAKLAKEAGWGCLVSHRSGETDDHFIADLVVGLGT
GEIKSGAPCRLKDYQNIID**klrrt*klhrskvfi
Translated Amino Acid sequence (All Frames) 
Frame A:
iliiiilkney*in*s*rnfg**r*snirs*smdk*rnvfsqstkwsinwys*si*ikrw
**kslfwiwcfecnc*ck*fnitnieryes**sksnr**nd*igwyke*iktwvqcnrwc
ingsgkssrfy*rcapvplhftigwk**ysftstmf*cy*wwktcr**ttisrvyasthw
ctki*rsialwfrslpftqrdhq---

---EEALTLLVDAINHSGYQDVIKIGIDSAASEFWNPKTSKYDMDFKNIGSSHLKSSLNS
GEQLMSRYLEILKKYPIAFFEGPFGEDDWENHGKITAAIGNRIQIIGDDLLCTNPERIKK
AISEKTVNSLLLKINQIGTLTETIEAAKLAKEAGWGCLVSHRSGETDDHFIADLVVGLGT
GEIKSGAPCRLKDYQNIID**klrrt*klhrskvfi

Frame B:
f**l*f*KMSIESIKAREILDSRGNPTLEVEVWTSEGMFSAKVPSGASTGIHEAFELRDG
DKSRYFGYGVLNAIVNVNNLISPTLKGMRVDNQKAIDDKMIELDGTKNKSKLGSNAIVGV
SMAVARAAASIKGVPLYRYISQLAGNSNIRLPVPCFNVINGGKHAGNRLPFQEFMLVPIG
APKFKEALRYGSEVYHSLKEII---

---kkh*lc*wmlsiiraikmllklvlilllqnfgiqrlqnmiwisri*dphi*slv*iv
vsn*cldi*rf*ksiqlhslkvhlvkmigkimvklqlqlviefkslvmiyfvqiqkelkk
qflrkl*ihyy*k*iksvh*lkllklqnlqkklvgvv*lvivqvklmiisllil*lvlvl
vk*nlvhlvd*kiiki**inen*eelknfidqrys

Frame C:
fnnynfkk*vlnqlklekfwiveviqh*klkygqvkecfqpkyqvehqlvfmkhln*emv
ikvvildmvf*mqllm*ii*yhqh*kv*eliikkq*mik*lnwmvqrinqnlgpmqslvy
qwqwqeqplllkvcpctvtfhnwleivifvyqyhvlmllmvenmqvidyhfkslc*yplv
hqnlkkhcvmvqkstihskrss---

---rsinsvsgcyqsfglsrcy*nwy*fccfrileskdfki*ygfqeyriltfev*fk*w
*ainv*ifrdfkkvsncil*rsiw*r*lgksw*nyscnw**nsnhw**ftlyksrkn*ks
nf*enckfiiienksnrytn*ny*scktckrswlglfs*ssfr*n**sfhc*scswswyw
*nkiwctl*ierlskynrlmkikknlkts*ikgih
Homology vs CSM-cDNA 

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CFG261 (CFG261Q) /CSM/CF/CFG2-C/CFG261Q.Seq.d/                       2434   0.0
CFE810 (CFE810Q) /CSM/CF/CFE8-A/CFE810Q.Seq.d/                       1229   0.0
AFO218 (AFO218Q) /CSM/AF/AFO2-A/AFO218Q.Seq.d/                       1215   0.0
AFB731 (AFB731Q) /CSM/AF/AFB7-B/AFB731Q.Seq.d/                       1207   0.0
AFF763 (AFF763Q) /CSM/AF/AFF7-C/AFF763Q.Seq.d/                       1199   0.0
CFG491 (CFG491Q) /CSM/CF/CFG4-D/CFG491Q.Seq.d/                       1195   0.0
CFC343 (CFC343Q) /CSM/CF/CFC3-B/CFC343Q.Seq.d/                       1195   0.0
CFJ407 (CFJ407Q) /CSM/CF/CFJ4-A/CFJ407Q.Seq.d/                       1193   0.0
CHB680 (CHB680Q) /CSM/CH/CHB6-D/CHB680Q.Seq.d/                       1189   0.0
SFJ731 (SFJ731Q) /CSM/SF/SFJ7-B/SFJ731Q.Seq.d/                       1187   0.0
own update 2004.12.25
Homology vs DNA 

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

U09736|U09736.1 Entamoeba histolytica HM1:IMSS enolase (enl-1) mRNA, complete cds.    56   3e-20  4
BD183626|BD183626.1 Material for diagnosing malaria and immune antigen for suppressing growth of plasmodium.    50   1e-16  6
BD183625|BD183625.1 Material for diagnosing malaria and immune antigen for suppressing growth of plasmodium.    50   1e-16  6
U00152|U00152.1 Plasmodium falciparum enolase gene complete cds.    50   1e-16  6
AB026051|AB026051.1 Plasmodium falciparum mRNA for enolase, complete cds.    50   1e-16  6
BM164058|BM164058.1 EST566581 PyBS Plasmodium yoelii yoelii cDNA clone PYCLP21 5' end, mRNA sequence.    70   7e-16  2
BM162118|BM162118.1 EST564641 PyBS Plasmodium yoelii yoelii cDNA clone PYCKN41 5' end, mRNA sequence.    70   9e-16  3
BM166362|BM166362.1 EST568885 PyBS Plasmodium yoelii yoelii cDNA clone PYCNG69 5' end, mRNA sequence.    70   1e-15  2
BM165201|BM165201.1 EST567724 PyBS Plasmodium yoelii yoelii cDNA clone PYCMI87 5' end, mRNA sequence.    70   1e-15  3
Y17298|Y17298.1 Cunninghamella elegans mRNA for enolase.           56   1e-14  4
dna update 2004. 3. 7
Homology vs Protein 

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q27727) RecName: Full=Enolase;          EC=4.2.1.11; AltName: F...   426   e-117
DQ497988_1(DQ497988|pid:none) Polypterus senegalus enolase B mRN...   421   e-117
AM910990_161(AM910990|pid:none) Plasmodium knowlesi strain H chr...   424   e-117
(Q9U615) RecName: Full=Enolase;          EC=4.2.1.11; AltName: F...   421   e-116
BC054169_1(BC054169|pid:none) Xenopus laevis enolase 1, alpha, m...   418   e-116
DQ497985_1(DQ497985|pid:none) Polypterus senegalus enolase A mRN...   418   e-116
AK290525_1(AK290525|pid:none) Homo sapiens cDNA FLJ77877 complet...   416   e-116
(P09104) RecName: Full=Gamma-enolase;          EC=4.2.1.11; AltN...   416   e-116
(P17183) RecName: Full=Gamma-enolase;          EC=4.2.1.11; AltN...   416   e-115
EU306867_1(EU306867|pid:none) Cavia porcellus alpha-enolase (Eno...   416   e-115
protein update 2009. 5.14
PSORT 

 psg: 0.56  gvh: 0.44  alm: 0.38  top: 0.53  tms: 0.00  mit: 0.29  mip: 0.00
 nuc: 0.04  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: nuclear
	 28.0 %: cytoplasmic
	 16.0 %: mitochondrial
	  8.0 %: cytoskeletal
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system

>> prediction for CFG261 is nuc
5' end seq. ID CFG261F
5' end seq. 
>CFG261F.Seq
ATTTTAATAATTATAATTTTAAAAAATGAGTATTGAATCAATTAAAGCTAGAGAAATTTT
GGATAGTAGAGGTAATCCAACATTAGAAGTTGAAGTATGGACAAGTGAAGGAATGTTTTC
AGCCAAAGTACCAAGTGGAGCATCAACTGGTATTCATGAAGCATTTGAATTAAGAGATGG
TGATAAAAGTCGTTATTTTGGATATGGTGTTTTGAATGCAATTGTTAATGTAAATAATTT
AATATCACCAACATTGAAAGGTATGAGAGTTGATAATCAAAAAGCAATAGATGATAAAAT
GATTGAATTGGATGGTACAAAGAATAAATCAAAACTTGGGTCCAATGCAATCGTTGGTGT
ATCAATGGCAGTGGCAAGAGCAGCCGCTTCTATTAAAGGTGTGCCCCTGTACCGTTACAT
TTCACAATTGGCTGGAAATAGTAATATTCGTTTACCAGTACCATGTTTTAATGTTATTAA
TGGTGGAAAACATGCAGGTAATAGACTACCATTTCAAGAGTTTATGCTAGTACCCATTGG
TGCACCAAAATTTAAAGAAGCATTGCGTTATGGTTCAGAAGTCTACCATTCACTCAAAGA
GATCATCAA----------
Length of 5' end seq. 609
3' end seq. ID CFG261Z
3' end seq. 
>CFG261Z.Seq
----------GAAGAAGCATTAACTCTGTTAGTGGATGCTATCAATCATTCGGGCTATCA
AGATGTTATTAAAATTGGTATTGATTCTGCTGCTTCAGAATTTTGGAATCCAAAGACTTC
AAAATATGATATGGATTTCAAGAATATAGGATCCTCACATTTGAAGTCTAGTTTAAATAG
TGGTGAGCAATTAATGTCTAGATATTTAGAGATTTTAAAAAAGTATCCAATTGCATTCTT
TGAAGGTCCATTTGGTGAAGATGATTGGGAAAATCATGGTAAAATTACAGCTGCAATTGG
TAATAGAATTCAAATCATTGGTGATGATTTACTTTGTACAAATCCAGAAAGAATTAAAAA
AGCAATTTCTGAGAAAACTGTAAATTCATTATTATTGAAAATAAATCAAATCGGTACACT
AACTGAAACTATTGAAGCTGCAAAACTTGCAAAAGAAGCTGGTTGGGGTTGTTTAGTTAG
TCATCGTTCAGGTGAAACTGATGATCATTTCATTGCTGATCTTGTAGTTGGTCTTGGTAC
TGGTGAAATAAAATCTGGTGCACCTTGTAGATTGAAAGATTATCAAAATATAATAGATTA
ATGAAAATTAAGAAGAACTTAAAAACTTCATAGATCAAAGGTATTCATT
Length of 3' end seq. 639
Connected seq. ID CFG261P
Connected seq. 
>CFG261P.Seq
ATTTTAATAATTATAATTTTAAAAAATGAGTATTGAATCAATTAAAGCTAGAGAAATTTT
GGATAGTAGAGGTAATCCAACATTAGAAGTTGAAGTATGGACAAGTGAAGGAATGTTTTC
AGCCAAAGTACCAAGTGGAGCATCAACTGGTATTCATGAAGCATTTGAATTAAGAGATGG
TGATAAAAGTCGTTATTTTGGATATGGTGTTTTGAATGCAATTGTTAATGTAAATAATTT
AATATCACCAACATTGAAAGGTATGAGAGTTGATAATCAAAAAGCAATAGATGATAAAAT
GATTGAATTGGATGGTACAAAGAATAAATCAAAACTTGGGTCCAATGCAATCGTTGGTGT
ATCAATGGCAGTGGCAAGAGCAGCCGCTTCTATTAAAGGTGTGCCCCTGTACCGTTACAT
TTCACAATTGGCTGGAAATAGTAATATTCGTTTACCAGTACCATGTTTTAATGTTATTAA
TGGTGGAAAACATGCAGGTAATAGACTACCATTTCAAGAGTTTATGCTAGTACCCATTGG
TGCACCAAAATTTAAAGAAGCATTGCGTTATGGTTCAGAAGTCTACCATTCACTCAAAGA
GATCATCAA----------GAAGAAGCATTAACTCTGTTAGTGGATGCTATCAATCATTC
GGGCTATCAAGATGTTATTAAAATTGGTATTGATTCTGCTGCTTCAGAATTTTGGAATCC
AAAGACTTCAAAATATGATATGGATTTCAAGAATATAGGATCCTCACATTTGAAGTCTAG
TTTAAATAGTGGTGAGCAATTAATGTCTAGATATTTAGAGATTTTAAAAAAGTATCCAAT
TGCATTCTTTGAAGGTCCATTTGGTGAAGATGATTGGGAAAATCATGGTAAAATTACAGC
TGCAATTGGTAATAGAATTCAAATCATTGGTGATGATTTACTTTGTACAAATCCAGAAAG
AATTAAAAAAGCAATTTCTGAGAAAACTGTAAATTCATTATTATTGAAAATAAATCAAAT
CGGTACACTAACTGAAACTATTGAAGCTGCAAAACTTGCAAAAGAAGCTGGTTGGGGTTG
TTTAGTTAGTCATCGTTCAGGTGAAACTGATGATCATTTCATTGCTGATCTTGTAGTTGG
TCTTGGTACTGGTGAAATAAAATCTGGTGCACCTTGTAGATTGAAAGATTATCAAAATAT
AATAGATTAATGAAAATTAAGAAGAACTTAAAAACTTCATAGATCAAAGGTATTCATT
Length of connected seq. 1248
Full length Seq ID -
Full length Seq. -
Length of full length seq. -