>CFG104 (CFG104Q) /CSM/CF/CFG1-A/CFG104Q.Seq.d/
GTTTTTATATAACACGCACAATAATATTATTATTTAAAATAATTGTAACTGTATTTTATT
AAAAATATAATTATTTCAAATAGTATATATAAAAAACAAAGATGGCAGATGATGCAATTA
GAATAGCAATTGTAAATGCAGATAGATGCAAACCAAAGAAATGTAGTCAAGAATGTAAAA
AGTATTGCCCAGTCGTAAAGATGGGTAAACTTTGTATTGAAGTTAAACCAACATCAAAGA
TGTCATACATTTCAGAAGAACTTTGTAATGGTTGTGGTATTTGTGTAAAGAAATGTCCAT
TCGAAGCAATTCAAATCATTAATTTACCAAAGAATTTAACCAAAGAAACCACACATCGTT
ATGGTCCAAACAGTTTCAAACTTCATAGATTACCAACACCACGTCCAGGTCAAGTATTGG
GTTTAGTAGGTACCAATGGTATTGGTAAATCCACTGCCTTAAAGGTTTTAGCTGGTAAAT
TAAAACCAAATTTAGGTCTCTACGATAATCCACCAACTTGGGATGAAATCATTTCTTTCT
TCCGTGGTAATGAACTTCAATXXXXXXXXXXATCAGAATGTTGGCTGGTCATATGCCATC
CGATACTGATGCTCAAGTTCCAGAGTTGAATGTCAGTTACAAACCACAAAAAATCGATCC
AAAATTCCCAGGTTCCGTTAGAGAATTGATTAATAAACGTATTTGCAACACTTTCCTTCA
TCCACAATTCCAATCCGATGTCGTTAAACCATTAAACATTGAAAACATCATCGACAATCA
AGTACTCAATTTATCTGGTGGTGAGTTACAACGTGTTGCCATCGTTTTATGTTTAGGTCA
ACCTGCTGATATCTATCTCATTGATGAACCATCCGCTTATTTGGATTCTGAACAACGTAT
TATCGTCTCTAAAGTCATCAAGAGATTCATTCTTCACGCTGGTAAATCTGGTTTCATCGT
AGAGCACGATTTCATTATGGCCACTTATTTAGCTGATCGTGTCATCGTTTATGATGGTAT
TCCAGGTGTCTCTTGTGTTGCTAATACTCCACAATCTCTCCTCACTGGTATGAACTCTTT
CCTTAAATCTCTCGAAATCACTTTCCGTCGTGATCCATCCAATTTCCGTCCAAGAATTAA
CAAATTAAATTCAATCAAAGATAATGAACAAAAAGCTGCNGAATATTTCTTCCTGATAAT
G

fyitrtiillfkiivtvfy*kynyfk*yi*KTKMADDAIRIAIVNADRCKPKKCSQECKK
YCPVVKMGKLCIEVKPTSKMSYISEELCNGCGICVKKCPFEAIQIINLPKNLTKETTHRY
GPNSFKLHRLPTPRPGQVLGLVGTNGIGKSTALKVLAGKLKPNLGLYDNPPTWDEIISFF
RGNELQ---

---IRMLAGHMPSDTDAQVPELNVSYKPQKIDPKFPGSVRELINKRICNTFLHPQFQSDV
VKPLNIENIIDNQVLNLSGGELQRVAIVLCLGQPADIYLIDEPSAYLDSEQRIIVSKVIK
RFILHAGKSGFIVEHDFIMATYLADRVIVYDGIPGVSCVANTPQSLLTGMNSFLKSLEIT
FRRDPSNFRPRINKLNSIKDNEQKAAEYFFLIM

Frame A:
vfi*haq*yyylk*l*lyfikniiisnsiykkqrwqmmqle*ql*mqidanqrnvvknvk
siaqs*rwvnfvlklnqhqrchtfqknfvmvvvfv*rnvhskqfksliyqri*pkkphiv
mvqtvsnfidyqhhvqvkywv**vpmvlvnplp*rf*lvn*nqi*vstiihqlgmksfls
svvmnfn---

---IRMLAGHMPSDTDAQVPELNVSYKPQKIDPKFPGSVRELINKRICNTFLHPQFQSDV
VKPLNIENIIDNQVLNLSGGELQRVAIVLCLGQPADIYLIDEPSAYLDSEQRIIVSKVIK
RFILHAGKSGFIVEHDFIMATYLADRVIVYDGIPGVSCVANTPQSLLTGMNSFLKSLEIT
FRRDPSNFRPRINKLNSIKDNEQKAAEYFFLIM

Frame B:
flynthnniii*nncncillki*lfqivyiknkdgr*cn*nsnckcr*mqtkem*srm*k
vlpsrkdg*tly*s*tnikdvihfrrtl*wlwylckemsirsnsnh*ftkefnqrnhtsl
wskqfqts*itnttsrssigfsryqwyw*ihclkgfsw*iktkfrslr*stnlg*nhffl
pw**ts---

---secwlvichpilmlkfqs*msvtnhkksiqnsqvplen*linvfatlsfihnsnpms
lnh*tlktsstikysiylvvsynvlpsfyv*vnllisislmnhpliwilnnvlsslkssr
dsfftlvnlvss*stislwpli*livssfmmvfqvslvllilhnlsslv*tlslnlsksl
svvihpisvqeltn*iqskimnkklxniss**

Frame C:
fyitrtiillfkiivtvfy*kynyfk*yi*KTKMADDAIRIAIVNADRCKPKKCSQECKK
YCPVVKMGKLCIEVKPTSKMSYISEELCNGCGICVKKCPFEAIQIINLPKNLTKETTHRY
GPNSFKLHRLPTPRPGQVLGLVGTNGIGKSTALKVLAGKLKPNLGLYDNPPTWDEIISFF
RGNELQ---

---qnvgwsyairy*csssrvecqlqttknrskiprfr*rid**tylqhfpsstipircr
*tikh*khhrqsstqfiww*vttcchrfmfrstc*ylsh**tirlfgf*ttyyrl*shqe
ihssrw*iwfhrrarfhyghlfs*schrl*wysrcllcc*ystisphwyelfp*isrnhf
ps*siqfpskn*qikfnqr**tkscxiflpdn

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CFG104 (CFG104Q) /CSM/CF/CFG1-A/CFG104Q.Seq.d/                       2125   0.0
VHN381 (VHN381Q) /CSM/VH/VHN3-D/VHN381Q.Seq.d/                       1243   0.0
CFB124 (CFB124Q) /CSM/CF/CFB1-A/CFB124Q.Seq.d/                       1243   0.0
VFK139 (VFK139Q) /CSM/VF/VFK1-B/VFK139Q.Seq.d/                       1237   0.0
CHO528 (CHO528Q) /CSM/CH/CHO5-B/CHO528Q.Seq.d/                       1237   0.0
CFA366 (CFA366Q) /CSM/CF/CFA3-C/CFA366Q.Seq.d/                       1237   0.0
VHN147 (VHN147Q) /CSM/VH/VHN1-B/VHN147Q.Seq.d/                       1221   0.0
AFD629 (AFD629Q) /CSM/AF/AFD6-B/AFD629Q.Seq.d/                       1217   0.0
VHC726 (VHC726Q) /CSM/VH/VHC7-B/VHC726Q.Seq.d/                       1207   0.0
AHJ803 (AHJ803Q) /CSM/AH/AHJ8-A/AHJ803Q.Seq.d/                       1207   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AY077634|AY077634.1 Dictyostelium discoideum RNaseL inhibitor-like protein ABCE.1 gene, complete cds.  1205   0.0    3
AX488972|AX488972.1 Sequence 6272 from Patent WO02053728.          84   2e-61  10
AX831598|AX831598.1 Sequence 2318 from Patent WO03072602.          78   4e-43  7
AX820568|AX820568.1 Sequence 2318 from Patent EP1338608.           78   4e-43  7
AX596270|AX596270.1 Sequence 1924 from Patent EP1258494.           78   4e-43  7
AR147511|AR147511.1 Sequence 21 from patent US 6221597.            78   4e-43  7
Z50111|Z50111.1 S.cerevisiae chromosome IV cosmid 6652.            78   2e-39  7
AY450958|AY450958.1 Cercopithecus aethiops RNase L inhibitor mRNA, complete cds.    56   2e-36  8
CF601820|CF601820.1 tac34e04.y1 Hydra EST -IV Hydra magnipapillata cDNA 5' similar to TR:O49679 O49679 RNASE L INHIBITOR. ;, mRNA sequence.    78   2e-27  3
BD310325|BD310325.1 Human prostate cancer associated gene sequences and polypeptides.    64   5e-27  8

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY077634_1(AY077634|pid:none) Dictyostelium discoideum RNaseL in...   409   e-112
CR380953_343(CR380953|pid:none) Candida glabrata strain CBS138 c...   283   9e-88
(Q03195) RecName: Full=Translation initiation factor RLI1; AltNa...   283   1e-87
CP000593_269(CP000593|pid:none) Ostreococcus lucimarinus CCE9901...   297   2e-87
AE014296_1653(AE014296|pid:none) Drosophila melanogaster chromos...   289   3e-87
AP008217_1071(AP008217|pid:none) Oryza sativa (japonica cultivar...   298   3e-87
AK226939_1(AK226939|pid:none) Arabidopsis thaliana mRNA for RNas...   302   3e-87
CR954213_290(CR954213|pid:none) Ostreococcus tauri strain OTTH05...   289   4e-87
CR382139_534(CR382139|pid:none) Debaryomyces hansenii strain CBS...   285   1e-86
AC157490_5(AC157490|pid:none) Medicago truncatula clone mth2-123...   294   1e-86

 psg: 0.61  gvh: 0.30  alm: 0.37  top: 0.53  tms: 0.00  mit: 0.24  mip: 0.00
 nuc: 0.03  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 36.0 %: nuclear
	  8.0 %: cytoskeletal
	  8.0 %: mitochondrial
	  4.0 %: vacuolar

>> prediction for CFG104 is cyt

>CFG104F.Seq
GTTTTTATATAACACGCACAATAATATTATTATTTAAAATAATTGTAACTGTATTTTATT
AAAAATATAATTATTTCAAATAGTATATATAAAAAACAAAGATGGCAGATGATGCAATTA
GAATAGCAATTGTAAATGCAGATAGATGCAAACCAAAGAAATGTAGTCAAGAATGTAAAA
AGTATTGCCCAGTCGTAAAGATGGGTAAACTTTGTATTGAAGTTAAACCAACATCAAAGA
TGTCATACATTTCAGAAGAACTTTGTAATGGTTGTGGTATTTGTGTAAAGAAATGTCCAT
TCGAAGCAATTCAAATCATTAATTTACCAAAGAATTTAACCAAAGAAACCACACATCGTT
ATGGTCCAAACAGTTTCAAACTTCATAGATTACCAACACCACGTCCAGGTCAAGTATTGG
GTTTAGTAGGTACCAATGGTATTGGTAAATCCACTGCCTTAAAGGTTTTAGCTGGTAAAT
TAAAACCAAATTTAGGTCTCTACGATAATCCACCAACTTGGGATGAAATCATTTCTTTCT
TCCGTGGTAATGAACTTCAAT----------

>CFG104Z.Seq
----------ATCAGAATGTTGGCTGGTCATATGCCATCCGATACTGATGCTCAAGTTCC
AGAGTTGAATGTCAGTTACAAACCACAAAAAATCGATCCAAAATTCCCAGGTTCCGTTAG
AGAATTGATTAATAAACGTATTTGCAACACTTTCCTTCATCCACAATTCCAATCCGATGT
CGTTAAACCATTAAACATTGAAAACATCATCGACAATCAAGTACTCAATTTATCTGGTGG
TGAGTTACAACGTGTTGCCATCGTTTTATGTTTAGGTCAACCTGCTGATATCTATCTCAT
TGATGAACCATCCGCTTATTTGGATTCTGAACAACGTATTATCGTCTCTAAAGTCATCAA
GAGATTCATTCTTCACGCTGGTAAATCTGGTTTCATCGTAGAGCACGATTTCATTATGGC
CACTTATTTAGCTGATCGTGTCATCGTTTATGATGGTATTCCAGGTGTCTCTTGTGTTGC
TAATACTCCACAATCTCTCCTCACTGGTATGAACTCTTTCCTTAAATCTCTCGAAATCAC
TTTCCGTCGTGATCCATCCAATTTCCGTCCAAGAATTAACAAATTAAATTCAATCAAAGA
TAATGAACAAAAAGCTGCNGAATATTTCTTCCTGATAATG

>CFG104P.Seq
GTTTTTATATAACACGCACAATAATATTATTATTTAAAATAATTGTAACTGTATTTTATT
AAAAATATAATTATTTCAAATAGTATATATAAAAAACAAAGATGGCAGATGATGCAATTA
GAATAGCAATTGTAAATGCAGATAGATGCAAACCAAAGAAATGTAGTCAAGAATGTAAAA
AGTATTGCCCAGTCGTAAAGATGGGTAAACTTTGTATTGAAGTTAAACCAACATCAAAGA
TGTCATACATTTCAGAAGAACTTTGTAATGGTTGTGGTATTTGTGTAAAGAAATGTCCAT
TCGAAGCAATTCAAATCATTAATTTACCAAAGAATTTAACCAAAGAAACCACACATCGTT
ATGGTCCAAACAGTTTCAAACTTCATAGATTACCAACACCACGTCCAGGTCAAGTATTGG
GTTTAGTAGGTACCAATGGTATTGGTAAATCCACTGCCTTAAAGGTTTTAGCTGGTAAAT
TAAAACCAAATTTAGGTCTCTACGATAATCCACCAACTTGGGATGAAATCATTTCTTTCT
TCCGTGGTAATGAACTTCAAT----------ATCAGAATGTTGGCTGGTCATATGCCATC
CGATACTGATGCTCAAGTTCCAGAGTTGAATGTCAGTTACAAACCACAAAAAATCGATCC
AAAATTCCCAGGTTCCGTTAGAGAATTGATTAATAAACGTATTTGCAACACTTTCCTTCA
TCCACAATTCCAATCCGATGTCGTTAAACCATTAAACATTGAAAACATCATCGACAATCA
AGTACTCAATTTATCTGGTGGTGAGTTACAACGTGTTGCCATCGTTTTATGTTTAGGTCA
ACCTGCTGATATCTATCTCATTGATGAACCATCCGCTTATTTGGATTCTGAACAACGTAT
TATCGTCTCTAAAGTCATCAAGAGATTCATTCTTCACGCTGGTAAATCTGGTTTCATCGT
AGAGCACGATTTCATTATGGCCACTTATTTAGCTGATCGTGTCATCGTTTATGATGGTAT
TCCAGGTGTCTCTTGTGTTGCTAATACTCCACAATCTCTCCTCACTGGTATGAACTCTTT
CCTTAAATCTCTCGAAATCACTTTCCGTCGTGATCCATCCAATTTCCGTCCAAGAATTAA
CAAATTAAATTCAATCAAAGATAATGAACAAAAAGCTGCNGAATATTTCTTCCTGATAAT
G